Low genetic variability of the white‐clawed crayfish in the Iberian Peninsula: its origin and management implications

• 1. A study on the genetic variability of the white‐clawed crayfish was carried out based on mitochondrial cytochrome oxidase subunit I gene sequences. The sequences applied were more informative regarding white‐clawed crayfish genetic variability than others previously used.
• 2. Two haplotypes were found to exist in the Iberian Peninsula. The haplotypes exhibit a strong geographic subdivision (Φ_ST=0.83). One of the Iberian haplotype s was similar to north Italian haplotypes and the second differed in only one mutation. This pattern of genetic variability contrasts with those found in glacial refugial areas of France, Italy and the Balkan Peninsula.
• 3. Two hypotheses on the origin of the white‐clawed crayfish in the Iberian Peninsula are discussed: (i) one based on an anthropogenic origin, and (ii) a second based on a successive number of postglacial ancient and recent bottlenecks, i.e. the disjunction between Iberian and Italian populations of white‐clawed crayfish species is due to competition between A. italicus and A. pallipes, in addition to the impact of crayfish plague and human translocations.
• 4. New references for the white‐clawed crayfish in the Iberian Peninsula were found in medieval and Arabic texts. The results show that this species has been thriving in this peninsula since ancient periods and that its indigenous status should not be questioned.
• 5. Conservation action and plans should consider the low genetic diversity as a limitation for farm‐raising specimens more adapted and resistant to changing environments and diseases.

Copyright © 2007 John Wiley & Sons, Ltd.     

Physical and chemical water requirements of the white‐clawed crayfish (Austropotamobius pallipes) in western France

• 1. In France, the distribution of the native white‐clawed crayfish (Austropotamobius pallipes) is restricted, fragmented and mainly located in headwater streams. To conserve this indigenous species, it is necessary to characterize its habitat preferences.
• 2. Seven brooks in the Deux‐Sèvres Département (western France) containing wild populations of A. pallipes were studied to determine its ranges of tolerance to 19 physical and chemical water parameters. On two brooks, the Sèvre Nantaise and the Verdonnière, sites with and without A. pallipes were compared. Each site was sampled twice monthly from November 2002 to November 2004.
• 3. It was found that the white‐clawed crayfish was able to tolerate wide ranges of values of some of the measured parameters. The Magot site harboured the largest A. pallipes population (17.5 crayfish m^?2) and had dissolved oxygen concentrations as low as 4.93 mg L^?1, while water temperature rose above 20°C for several consecutive days during summer and nitrate concentrations were always found to be above 30 mg L^?1. These unusual findings could call into question the status of A. pallipes as a bioindicator of good water quality.
• 4. Principal component analyses (PCA) suggested that an increase of organic matter was a discriminant factor for the presence or absence of A. pallipes. In addition, sites with and without crayfish on the Sèvre Nantaise brook showed showed significant differences (p<0.05) in total organic carbon (TOC), and those on the Verdonnière brook in turbidity and total suspended solids (TSS).

Copyright © 2006 John Wiley & Sons, Ltd.     

Morphological diversity and phenotypic plasticity in the threatened British white‐clawed crayfish (Austropotamobius pallipes)

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Genetic variation of the razor clam Ensis siliqua (Jeffreys, 1875) along the European coast based on random amplified polymorphic DNA markers

Ensis siliqua is regarded as an increasingly valuable fishery resource with potential for commercial aquaculture in many European countries. The genetic variation of this razor clam was analysed by randomly amplified polymorphic DNA (RAPD) in six populations from Spain, Portugal and Ireland. Out of the 40 primers tested, five were chosen to assess genetic variation. A total of 61 RAPD loci were developed ranging in size from 400 to 2000 bp. The percentages of polymorphic loci, the allele effective number and the genetic diversity were comparable among populations, and demonstrated a high level of genetic variability. The values of Nei's genetic distance were small among the Spanish and Portuguese populations (0.051–0.065), and high between these and the Irish populations. Cluster and principal coordinate analyses supported these findings. A mantel test performed between geographic and genetic distance matrices showed a significant correlation (r=0.84, P<0.05), suggesting an isolation by distance process.     

Relative impacts of native and non‐native crayfish on shelter use by an indigenous benthic fish

• 1. The North American signal crayfish Pacifastacus leniusculus has been widely introduced throughout Europe where it is expanding its range and in many areas replacing the native white‐clawed crayfish Austropotamobius pallipes. There is concern with regards to the impact of this species replacement on benthic fish. Interspecific behavioural interactions and competition for shelter between the benthic fish, bullhead Cottus gobio and A. pallipes and P. leniusculus were measured to assess the comparative impact of native and non‐native crayfish.
• 2. Both white‐clawed crayfish and signal crayfish were dominant over bullhead. Bullheads moved away from approaches of crayfish, left shelters on entry of crayfish and rarely entered an occupied shelter. Signal crayfish made significantly more aggressive approaches towards bullheads than white‐clawed crayfish.
• 3. Alone, bullheads spent most of their time by day under shelter (median 96%), reflecting a highly entrained behavioural response, which was relaxed by night (median 60%). Both crayfish species reduced shelter use by bullheads although the extent of shelter sharing by bullheads was higher in trials with white‐clawed crayfish than with signal crayfish.
• 4. Sampling in the River Wharfe, northern England, where signal and white‐clawed crayfish and bullhead currently exist, demonstrated a negative relationship between the densities of signal crayfish and bullhead, with high bullhead abundance where crayfish were absent or where white‐clawed crayfish were present at low density.
• 5. Assuming that shelter is sometimes limited under natural conditions, crayfish are likely to displace bullheads from shelters, which may increase predation risk for bullheads. Although the effects of signal crayfish on bullhead shelter use were more intense, the pattern was highly evident for the native white‐clawed crayfish. The higher fecundity and densities attained by signal crayfish may be more significant than differences in the behaviour of the two crayfish species in determining the impact of crayfish on bullheads.

Copyright © 2008 John Wiley & Sons, Ltd.     

The use of Chara spp. (Charales: Characeae) as a bioindicator of physico‐chemical habitat suitability for an endangered crayfish Austropotamobius pallipes in lentic waters

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Niche‐based species distribution models and conservation planning for endangered freshwater crayfish in south‐western Germany

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Prospects for management strategies of invasive crayfish populations with an emphasis on biological control

• 1. The white‐clawed crayfish, Austropotamobius pallipes (Lereboullet), is the only freshwater crayfish indigenous to Great Britain and Ireland. It has a widespread, though declining distribution in England and parts of Wales but does not occur naturally in Scotland.
• 2. The North American signal crayfish, Pacifastacus leniusculus (Dana), is not native to Europe and was introduced to Britain in the 1970s. The signal crayfish out‐competes the native white‐clawed crayfish as it is larger and more aggressive. It is also responsible for the introduction and spread of crayfish plague, which has devastated white‐clawed crayfish populations in Europe.
• 3. Signal crayfish populations are causing significant changes to the equilibrium of native flora and fauna through increased grazing and predation pressures; they also contribute to habitat degradation through burrowing.
• 4. Manual removal of crayfish using traps and pond trials with biocides have met with moderate success in reducing crayfish numbers and containing populations. However, with new populations of signal crayfish being reported each year within the UK, there is now an urgent need to develop a strategy with which to eradicate or contain their spread.
• 5. Signal crayfish have populated many habitat types in the UK, each of which may require a different control strategy; hence no single strategy or universal solution is likely to be attainable.
• 6. Signal crayfish are susceptible to various biocides and microbial pathogens but significant scientific research will be required to develop safe biological control methods and integrated pest management (IPM) strategies to control these invasive organisms. Copyright © 2009 John Wiley & Sons, Ltd.

     

Colonization history and human translocations explain the population genetic structure of the noble crayfish (Astacus astacus) in Fennoscandia: Implications for the management of a critically endangered species

1. The noble crayfish (Astacus astacus) is an endangered freshwater species in Europe. The main threat is from lethal crayfish plague, caused by the oomycete Aphanomyces astaci that has been spread over Europe by introduced North American crayfish species, acting as chronic carriers of the disease.
2. Most of the remaining noble crayfish populations are found in the Baltic Sea area, and there is an urgent need to implement conservation actions to slow down or halt the extinction rate in this region. However, limited knowledge about the genetic structure of populations in this area has so far precluded the development of conservation strategies that take genetic aspects into consideration.
3. Key objectives of this large-scale genetic study, covering 77 locations mainly from northern Europe, were to describe the contemporary population genetic structure of the noble crayfish in the Fennoscandian peninsula (Sweden, Norway, and Finland), taking postglacial colonization history into account, and to evaluate how human activities such as stocking have affected the genetic structure of the populations.
4. Analyses of 15 microsatellite markers revealed three main genetic clusters corresponding to populations in northern, middle, and southern Fennoscandia, with measures of genetic diversity being markedly higher within populations in the southern cluster. The observed genetic structure probably mirrors two main colonizations of the Baltic Sea basin after the last glaciation period. At the same time, several deviations from this pattern were observed, reflecting past human translocations of noble crayfish.
5. The results are discussed in relation to the conservation and management of this critically endangered species. In particular, we recommend increased efforts to protect the few remaining noble crayfish populations in southern Fennoscandia and the use of genetic information when planning stocking activities, such as reintroductions following local extinctions.

     

Time‐series analysis of native and non‐native crayfish dynamics in the Thames River Basin (south‐eastern England)

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Conserving indigenous crayfish: stock assessment and habitat requirements in the threatened Austropotamobius italicus

• 1. As part of the Austropotamobius pallipes species complex, the crayfish Austropotamobius italicus is a species of community interest whose preservation requires the designation of Special Areas of Conservation (SACs) (Annex II, EU Habitats Directive). This study aimed at (1) assessing the conservation status of this threatened indigenous species by stock assessment in central Italy and (2) identifying some aspects of its elective habitat.
• 2. Surveys were conducted in nine streams harbouring A. italicus (streams WI) and in 10 streams where crayfish populations became extinct at least 5 years before the study (streams WO).
• 3. The results confirmed that A. italicus is a K‐selected species, with a relatively slow growth rate (males: 0.34; females: 0.37) and a long life expectancy (males: 8.2 years; females: 7.8 years). The extant populations are healthy, showing balanced sex‐ratios and well structured age‐class compositions. Mortality is mainly due to fishing, which is illegal in Tuscany.
• 4. Principal Components Analyses showed that the streams WI and WO differ in the abundance of allochthonous plant detritus but not in the taxonomic composition of their macroinvertebrate communities. Age classes were found to be spatially segregated, juveniles mainly using cobbles as substrates and adults seemingly avoiding them.
• 5. The loss of the pristine riverine landscape seems to have been responsible, together with illegal fishing, for the local extinction of the species. As a consequence, retaining, enhancing, and restoring the habitat and its complexity are required for the preservation of A. italicus.
• 6. The designation of SACs might help in this endeavour if accompanied by programmes aimed at publicizing the need for conservation of this species. Unfortunately, crayfish‐focused projects supported by LIFE in Italy since 1992 (4%) and the SACs involved (1.4%) have been relatively few, despite the poor conservation status of this species and its well recognized ecological role.

Copyright © 2008 John Wiley & Sons, Ltd.     

Population structure,genetic diversity,and colonization history of the eastern pondmussel,Sagittunio nasutus,in the Great Lakes drainage

1. The eastern pondmussel, Sagittunio nasutus (Bivalvia: Unionida), has declined in abundance and distribution in eastern North America over the last few decades. The declines are predominantly the result of infestation by invasive dreissenid mussels and changes in habitat. The species is now considered imperilled across large portions of its distribution, especially in the Laurentian Great Lakes region.
2. The genetic diversity and structure of the remnant populations in the Great Lakes region were assessed using 10 newly developed microsatellite DNA loci for S. nasutus. Understanding the remaining populations can inform future management projects and determine whether the remnant populations have experienced a genetic bottleneck or a founder effect. We hope that this will inform the conservation of other species in regions founded by, and isolated from, a more genetically diverse source population or with disjointed geographical distributions.
3. Focusing on the Great Lakes region, samples (n = 428) from 62 collection sites in 28 water bodies were collected. Across the locations sampled for S. nasutus 11 genetic populations were identified, with significant genetic differentiation among them. The genetic structure of the species was assessed, with genetic similarities among populations compared and with geographical routes of colonization and gene flow evaluated.
4. Initial colonization from the Atlantic coast into Lake Erie and Lake Ontario is evident, followed by colonization events into nearby inland rivers and lakes. Analyses found evidence of inbreeding in all but one population and evidence of past genetic bottlenecks or strong founder effects in all but four populations. This study deepens our understanding of the genetic past and present of this imperilled species, providing conservation suggestions for the future management of the species.

     

Spatial ecology of the white‐clawed crayfish in an upland stream and implications for the conservation of this endangered species

• 1. Populations of white‐clawed crayfish (Austropotamobius pallipes) have undergone substantial declines across Europe. Remaining populations tend to be fragmented and in many catchments they are restricted to upland streams. Information is needed concerning their spatial ecology to assist with conservation and rehabilitation of existing fragmented populations, as well as possible reintroductions.
• 2. A novel method for the long‐term tagging of white‐clawed crayfish was used to study the spatial ecology of a white‐clawed crayfish population fragment in a small, moderate‐gradient upland stream. Internal passive integrated transponder (PIT) tags enabled adult crayfish (carapace length >27 mm) to be permanently tagged, each with a unique identification code and resulted in a high number of recaptures. Of 501 crayfish tagged 413 were subsequently relocated at least once.
• 3. Crayfish did not make extensive movements, the median annual distance moved was 84.8 m yr^?1, equivalent to annual net movement of 0.233 m day^?1, substantially less than reported in previous studies. The lower levels of movement may reflect the study encompassing all seasons, including winter, when crayfish are relatively inactive.
• 4. Significantly more crayfish moved downstream compared with upstream and distances moved downstream were significantly greater than those in an upstream direction. This may be linked to the relatively high gradient of the stream and a reduced passability of the abundant riffles to upstream movements of crayfish.
• 5. A small weir acted as a barrier within the stream, preventing upstream movements of crayfish. Even small barriers may limit the movements of white‐clawed crayfish and have the potential to limit connectivity within populations and prevent expansion or recolonization.
• 6. The results presented suggest that fragmented populations of white‐clawed crayfish in upland streams are unlikely to expand rapidly and reconnect to other population fragments, even where habitat is suitable. In establishing stream populations care should be taken to ensure that even small barriers to movement are removed unless these are intended to exclude non‐native biota, especially crayfish.

Copyright © 2007 John Wiley & Sons, Ltd.     

Aphanomyces astaci presence in Japan: a threat to the endemic and endangered crayfish species Cambaroides japonicus?

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Predation by invasive signal crayfish on early life stages of European barbel may be limited

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Crayfish in central and southern Ukraine with special focus on populations of indigenous crayfish Astacus pachypus (Rathke, 1837) and their conservation needs

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Newly developed microsatellite markers for the pan‐European duck mussel,Anodonta anatina: revisiting the main mitochondrial lineages

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Population structure of the migratory fish Prochilodus lineatus (Characiformes) from rio Grande basin (Brazil), an area fragmented by dams

• 1. Prochilodus lineatus (Prochilodontidae, Characiformes) is a migratory species of great economic importance both in fisheries and aquaculture that is found throughout the Jacuí, Paraíba do Sul, Paraná, Paraguay and Uruguay river basins in South America. Earlier population studies of P. lineatus in the rio Grande basin (Paraná basin) indicated the existence of a single population; however, the range of this species has been fragmented by the construction of several dams. Such dams modified the environmental conditions and could have constrained the reproductive migration of P. lineatus, possibly leading to changes in the population genetic structure.
• 2. In order to evaluate how genetic diversity is allocated in the rio Grande basin, 141 specimens of P. lineatus from eight collection sites were analysed using polymerase chain reaction–restriction fragment length polymorphism (PCR‐RFLP) with 15 restriction enzymes.
• 3. Forty‐six haplotypes were detected, and 70% of them are restricted. The mean genetic variability indexes (h = 0.7721 and π = 1.6%) were similar to those found in natural populations with a large effective size. Fst and Exact Test values indicated a lack of structuring among the samples, and the model of isolation by distance was tested and rejected.
• 4. The haplotype network indicated that this population of P. lineatus has been maintained as a single variable stock with some differences in the genetic composition (haplotypes) between samples. Indications of population expansion were detected, and this finding was supported by neutrality tests and mismatch distribution analyses.
• 5. The present study focused on regions between dams to serve as a parameter for further evaluations of genetic variability and the putative impact of dams and repopulation programmes in natural populations of P. lineatus. Copyright © 2011 John Wiley & Sons, Ltd.

     

Integrating fishing and conservation in a risk framework: A stochastic population model to guide the proactive management of a threatened freshwater crayfish

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