Soil microbial activity and crop sustainability in a long-term experiment with three soil-tillage and two crop-rotation systems

Reduction in soil disturbance can stimulate soil microbial biomass and improve its metabolic efficiency, resulting in better soil quality, which in turn, can increase crop productivity. In this study we evaluated microbial biomass of C (MB-C) by the fumigation-extraction (FE) or fumigation-incubation (FI) method; microbial biomass of N (MB-N); basal respiration (BR) induced or not with sucrose; metabolic quotient (obtained by the ratio BR/MB-C) induced (qCO₂(S)), or not with sucrose (qCO₂); and crop productivity in a 14-year experiment in the state of Paraná, southern Brazil. The experiment consisted of three soil-tillage systems [no-tillage (NT), conventional tillage (CT) and no-tillage using a field cultivator every 3 years (FC)] and two cropping systems [a soybean–wheat-crop sequence (CS), and a soybean–wheat–white lupin–maize–black oat–radish crop rotation (CR)]. There were six samplings in the 14th year, starting at the end of the winter crop (wheat in the CS and lupin in the CR plots) and finishing at full flowering of the summer crop (soybean in the CS and maize in the CR). Differences in microbiological parameters were greater than those detected in the total C (TCS) and total N (TNS) contents of the soil organic matter (SOM). Major differences were attributed to tillage, and on average NT was higher than the CT in the following parameters: TCS (19%), TNS (21%), MB-C evaluated by FE (74%) and FI (107%), and MB-N (142%). The sensibility of the microbial community and processes to soil disturbance in the tropics was highlighted, as even a moderate soil disturbance every 3 years (FC) affected microbial parameters but not SOM. The BR was the parameter that most promptly responded to soil disturbance, and strong differences were perceived by the ratio of qCO₂ evaluated with samples induced and non-induced with sucrose. At plowing, the qCO₂(S):qCO₂ was five times higher under CT, indicating a C-starving low-effective microbial population in the C-usage. In general, crop rotation had no effect on microbial parameters or SOM. Grain yield was affected by tillage and N was identified as a limiting nutrient. Linear regressions between grain yields and microbial parameters showed that soybean was benefited from improvements in the microbial biomass and metabolic efficiency, but with no significant effects observed for the maize crop. The results also indicate that the turnover of C and N in microbial communities in tropical soils is rapid, reinforcing the need to minimize soil disturbance and to balance inputs of N and C.     

Microbiological parameters as indicators of soil quality under various soil management and crop rotation systems in southern Brazil

The objective of this work was to identify soil parameters potentially useful to monitor soil quality under different soil management and crop rotation systems. Microbiological and chemical parameters were evaluated in a field experiment in the State of Paraná, southern Brazil, in response to soil management [no-tillage (NT) and conventional tillage (CT)] and crop rotation [including grain (soybean, S; maize, M; wheat, W) and legume (lupin, L.) and non-legume (oat, O) covers] systems. Three crop rotation systems were evaluated: (1) (O/M/O/S/W/S/L/M/O/S), (2) (O/S/L/M/O/S/W/S/L/M), and (3) (O/S/W/S/L/M/O/M/W/M), and soil parameters were monitored after the fifth year. Before ploughing, CO₂-emission rates were similar in NT and CT soils, but plough increased it by an average of 57%. Carbon dioxide emission was 13% higher with lupin residues than with wheat straw; decomposition rates were rapid with both soil management systems. Amounts of microbial biomass carbon and nitrogen (MB-C and MB-N, respectively) were 80 and 104% higher in NT than in CT, respectively; however, in general these parameters were not affected by crop rotation. Efficiency of the microbial community was significantly higher in NT: metabolic quotient (qCO₂) was 55% lower than in CT. Soluble C and N levels were 37 and 24% greater in NT than in CT, respectively, with no effects of crop rotation. Furthermore, ratios of soluble C and N contents to MB-C and MB-N were consistently lower in NT, indicating higher immobilization of C and N per unit of MB. The decrease in qCO₂ and the increase in MB-C under NT allowed enhancements in soil C stocks, such that in the 0–40 cm profile, a gain of 2500 kg of C ha⁻¹ was observed in relation to CT. Carbon stocks also varied with crop rotation, with net changes at 0–40 cm of 726, 1167 and −394 kg C ha⁻¹ year, in rotations 1, 2 and 3, respectively. Similar results were obtained for the N stocks, with 410 kg N ha⁻¹ gained in NT, while crop rotations 1, 2 and 3 accumulated 71, 137 and 37 kg of N ha⁻¹ year⁻¹, respectively. On average, microbial biomass corresponded to 2.4 and 1.7% of the total soil C, and 5.2 and 3.2% of the N in NT and CT systems, respectively. Soil management was the main factor affecting soil C and N levels, but enhancement also resulted from the ratios of legumes and non-legumes in the rotations. The results emphasize the importance of microorganisms as reservoirs of C and N in tropical soils. Furthermore, the parameters associated with microbiological activity were more responsive to soil management and crop rotation effects than were total stocks of C and N, demonstrating their usefulness as indicators of soil quality in the tropics.     

Specific response of fungal and bacterial residues to one-season tillage and repeated slurry application in a permanent grassland soil

The dynamics of fungal and bacterial residues to a one-season tillage event in combination with manure application in a grassland soil are unknown. The objectives of this study were (1) to assess the effects of one-season tillage event in two field trials on the stocks of microbial biomass, fungal biomass, microbial residues, soil organic C (SOC) and total N in comparison with permanent grassland; (2) to determine the effects of repeated manure application to restore negative tillage effects on soil microbial biomass and residues. One trial was started 2 years before sampling and the other 5 years before sampling. Mouldboard ploughing decreased the stocks of SOC, total N, microbial biomass C, and microbial residues (muramic acid and glucosamine), but increased those of the fungal biomarker ergosterol in both trials. Slurry application increased stocks of SOC and total N only in the short-term, whereas the stocks of microbial biomass C, ergosterol and microbial residues were generally increased in both trials, especially in combination with tillage. The ergosterol to microbial biomass C ratio was increased by tillage, and decreased by slurry application in both trials. The fungal C to bacterial C ratio was generally decreased by these two treatments. The metabolic quotient qCO₂ showed a significant negative linear relationship with the microbial biomass C to SOC ratio and a significant positive relationship with the soil C/N ratio. The ergosterol to microbial biomass C ratio revealed a significant positive linear relationship with the fungal C to bacterial C ratio, but a negative one with the SOC content. Our results suggest that slurry application in grassland soil may promote SOC storage without increasing the role of saprotrophic fungi in soil organic matter dynamics relative to that of bacteria.     

Soil organic matter,microbial properties,and aggregate stability under annual and perennial pastures

The use of annually sown pastures to provide winter forage is common in dairy farming in many regions of the world. Loss of organic matter and soil structural stability due to annual tillage under this management may be contributing to soil degradation. The comparative effects of annual ryegrass pastures (conventionally tilled and resown each year), permanent kikuyu pastures and undisturbed native vegetation on soil organic matter content, microbial size and activity, and aggregate stability were investigated on commercial dairy farms in the Tsitsikamma region of the Eastern Cape, South Africa. In comparison with soils under sparse, native grassy vegetation, those under both annual ryegrass and permanent kikuyu pasture had higher soil organic matter content on the very sandy soils of the eastern end of the region. By contrast, in the higher rainfall, western side, where the native vegetation was coastal forest, there was a loss of organic matter under both types of pasture. Nonetheless, soil organic C, K₂SO₄-extractable C, microbial biomass C, basal respiration, arginine ammonification and fluorescein diacetate hydrolysis rates and aggregate stability were less under annual than permanent pastures at all the sites. These results reflect the degrading effect of annual tillage on soil organic matter and the positive effect of grazed permanent pasture on soil microbial activity and aggregation. Soil organic C, microbial biomass C, K₂SO₄-extractable C, basal respiration and aggregate stability were significantly correlated with each other. The metabolic quotient and percentage of organic C present as microbial biomass C were generally poorly correlated with other measured properties but negatively correlated with one another. It was concluded that annual pasture involving conventional tillage results in a substantial loss of soil organic matter, soil microbial activity and soil physical condition under dairy pastures and that a system that avoids tillage needs to be developed.     

清水灌溉在消除土壤多环芳烃中的作用及对土壤微生物特征的影响: 以沈抚灌区为例

To evaluate the effect of groundwater irrigation on the polycyclic aromatic hydrocarbons(PAHs) pollution abatement and soil microbial characteristics,a case study was performed in the Shenfu irrigation area of Shenyang,Northeast China,where the irrigation with petroleum wastewater had lasted for more than fifty years,and then groundwater irrigation instead of wastewater irrigation was applied due to the gradually serious PAHs pollution in soil.Soil chemical properties,including PAHs and nutrients contents,and soil microbial characteristics,including microbial biomass carbon,substrateinduced respiration,microbial quotient(qM),metabolic quotient(qCO2),dehydrogenase(DH),polyphenol oxidase(PO),urease(UR) and cellulase(CE) in surface and subsurface were determined.Total organic C,total N,total P,and available K were significantly different between the sites studied.The PAHs concentrations ranged from 610.9 to 6362.8 μg kg-1 in the surface layers(0-20 cm) and from 404.6 to 4318.5 μg kg-1 in the subsurface layers(20-40 cm).From the principal component analysis,the first principal component was primarily weighed by total PAHs,total organic C,total N,total P and available K,and it was the main factor that influencing the soil microbial characteristics.Among the tested microbial characteristics,DH,PO,UR,CE,qM and qCO2 were more sensitive to the PAHs stress than the others,thus they could serve as useful ecological assessment indicators for soil PAHs pollution.     

Impact of perennial pasture and tillage systems on carbon input and soil quality indicators

Soil degradation associated with tillage is a major problem in Uruguayan agriculture. Either rotation of crops with pastures (ROT) or no-till (NT) cropping have been proposed as alternatives to minimize the impact of agriculture on soil quality. The combined impact on soil properties of ROT and NT has not been evaluated. In this study, we report results of the first 12 years of a long-term experiment established on a clay loam soil in western Uruguay. The objective was to determine the influence of conventional tillage (CT) and NT on systems under continuous cropping (CC, two crops per year) or ROT (3.5-year annual crops/2.5-year pastures). Soil samples taken at the beginning of the experiment in 1994 and in 2004 were analyzed for organic carbon (SOC), total organic carbon (TSOC) and total nitrogen content (STN), and for water-stable aggregation (WAS). Soil loss and erodibility indicators were studied using microrain simulator. With 12 years, the cumulative carbon (C) inputs of aboveground biomass were similar between tillage, but C input in CC was 50% higher than ROT. This difference was explained because 84% of the pastures dry matter was consumed by animals. Nevertheless we estimated a higher below ground biomass in ROT compared to CC systems (24.9 Mg ha⁻¹ vs. 10.9 Mg ha⁻¹). NT presented 7% higher SOC than CT (0–18 cm) with no differences between rotation systems. While all treatments declined in STN during 12 years, ROT had 11% and 58% higher STN and WAS than CC systems, with a large impact of the pasture under CT. Runoff and erosion were minimized under NT in both rotations systems. Thus, including pastures in the rotation, or switching from CT to NT improved soil quality properties. The expected benefit of combining NT and ROT will likely require more years for the cumulative effect to be detectable in both C input and soil properties.     

Microbial biomass and activity at various soil depths in a Brazilian oxisol after two decades of no-tillage and conventional tillage

The advantages of no-tillage (NT) over conventional tillage (CT) systems in improving soil quality are generally accepted, resulting from benefits in soil physical, chemical and biological properties. However, most evaluations have only considered surface soil layers (maximum 0-30 cm depth), and values have not been corrected to account for changes in soil bulk density. The objective of this study was to estimate a more realistic contribution of the NT to soil fertility, by evaluating C- and N-related soil parameters at the 0-60 cm depth in a 20-year experiment established on an oxisol in southern Brazil, with a soybean (summer)/wheat (winter) crop succession under NT and CT. At full flowering of the soybean crop, soil samples were collected at depths of 0-5, 5-10, 10-20, 20-30, 30-40, 40-50 and 50-60 cm. For the overall 0-60 cm layer, correcting the values for soil bulk density, NT significantly increased the stocks of C (18%) and N (16%) and microbial biomass C (35%) and N (23%) (MB-C and -N) in comparison to CT. Microbial basal respiration and microbial quotient (qMic) were also significantly increased under NT. When compared with CT, NT resulted in gains of 0.8 Mg C ha⁻¹ yr⁻¹ (67% of which was in the 0-30 cm layer) and 70 kg N ha⁻¹ yr⁻¹ (73% in the 0-30 cm layer). In the 0-5-cm layer, MB-C was 82% higher with NT than with CT; in addition, the 0-30 cm layer accumulated 70% of the MB-C with NT, and 58% with CT. In comparison to CT, the NT system resulted in total inputs of microbial C and N estimated at 38 kg C ha⁻¹ yr⁻¹ and 1.5 kg N ha⁻¹ yr⁻¹, respectively. Apparently, N was the key nutrient limiting C and N stocks, and since adoption of NT resulted in a significant increase of N in soils which were deficient in N, efforts should be focused on increasing N inputs on NT systems.     

Identifying indicators of C and N cycling in a clayey Ultisol under different tillage and uses in winter

Although tropical and subtropical environments permit two cropping cycles per year, maintaining adequate mulching on the soil surface remains a challenge. In some cases, leaving soils fallow during the winter as an agricultural practice to control pathogens contributes to reduce soil mulching. The aim of this study was to assess attributes associated with C and N cycling in a soil under conventional and no-tillage management, with contrasting uses in winter: black oats (Avena strigosa Schreb) as cover crop or fallow. No-tillage increased total C and N, irrespective the winter crop. Cropping black oats under no-tillage resulted in more microbial biomass C and N, and glutaminase activity (15.2%, 65.2%, and 24%, respectively) than no-tillage under fallow. Under conventional tillage, winter cropping did not affect the attributes under study. Available P was higher in the no-tillage system (9.2–12.3 mg kg⁻¹), especially when cropped with black oats, than in the conventional tillage system (4.8–6.6 mg kg⁻¹). A multivariate analysis showed strong relationships between soil microbiological and chemical attributes in the no-tillage system, especially when cropped with black oats. Soil pH, dehydrogenase and acid phosphatase activities were the most effective at separating the soil use in winter. Microbial N, total N, microbial to total N ratio, available P, metabolic quotient (qCO₂), and glutaminase activity were more effective at separating soil management regimes. The no-tillage system in association with winter oat cropping stimulated the soil microbial community, carbon and nutrient cycling, thereby helping to improve the sustainability of the cropping system.     

Impact of ecological and conventional arable management systems on chemical and biological soil quality indices in Nicaragua

We measured the activity and soil microbial biomass in volcanic ash soils from 10 sites under ecological farming (no pesticides, shallow ploughing, mulching, organic fertilizers, crop rotation) and 15 sites under conventional farming (pesticides, mineral fertilizers, deep ploughing). Our aim was to determine the effects of management system on soil quality and soil fertility in tropical Nicaragua in relation to soil type. None of these sites were irrigated. Conventional management led to significantly increased amounts of total soil P and a significantly larger biomass C-to-P ratio compared to ecological management. Almost all of the other microbial properties, i.e. soil basal respiration, ergosterol and biomass C were significantly improved by ecological management. Also the biomass C-to-soil C ratio was significantly increased, but not the metabolic quotient qCO₂ or the ergosterol-to-biomass C ratios, indicating that the positive effects of ecological management were mainly due to increased C input rates. Biomass C, ergosterol, and basal respiration rate were significantly larger at the loamy sites than at the sandy sites. The same was true for the biomass C-to-soil C ratio, but the ergosterol-to-biomass C ratio and the metabolic quotient qCO₂ were larger at the sandy sites. Our results demonstrate that ecological management is an important tool for soil conservation and sustainable management of arable land in Nicaragua. However, the decline in total P and the low P availability to soil microorganisms need attention as a precaution against P deficiency. The improvement was greatest at the loamy sites, although the effects of management system were in most cases independent of the soil type. For this reason, ecological management should be preferably promoted on loamy soils.     

Effect of temperature on soil microbial biomass and its metabolic quotient in situ under different tillage systems

Variations in the microbial biomass and the in situ metabolic quotient (qCO₂) due to climatic conditions were determined in a typical soil from the Argentine Rolling Pampa. Microbial C was evaluated by fumigation-incubation and qCO₂ was calculated using soil respiration in the field. An inverse relationship between microbial C and soil temperature was fitted to a model (r ²=0.90, P=0.01). No significant association with the soil water content was detected because the soil was generally near field capacity and thus water availability did not limited microbial growth and activity. Values of qCO₂ increased (r ²=0.89, P=0.01) as the result of metabolic activatìon, likely induced by a higher maintenance energy requirement at high temperatures. The highest values of qCO₂ were obtained when microbial C was the lowest, which was attributed to self consumption of microbial C in the presence of high temperatures. Consequently, microbial C was generally higher (P=0.05) in winter than in summer. Therefore, when microbial C is used as an index of soil biological activity, the influence of temperature should be taken into account.     

Application of eco-physiological quotients (qCO2 and qD) on microbial biomasses from soils of different cropping histories

Metabolic quotients for CO₂C (qCO₂C) and microbial-C-loss (qD) were studied on soil microbial communities under long-term monoculture (M) or continuous crop rotations (CR). Under defined laboratory conditions the mean qCO₂C (unit CO₂C unit⁻¹ C_mic h⁻¹) of different microbial biomasses from 17 M systems amounted to 1.097 μg CO₂qCO₂CC as compared to 0.645 μg CO₂C of microbial biomasses from 19 CR systems. The 1.7 times higher CO₂C release per unit biomass and time of microbial biomasses from M systems was significantly different at the P =0.001 level.In addition, microbial C-loss in samples from M or CR plots was followed for 5 weeks. Again, mean qD per unit microbial biomass and time was 1.6 times higher (P = 0.01) for microbial biomasses from M systems (0.301 μg C, 14 soils) when compared with CR systems (0.188μg C, 14 soils).These differences were not related to soil texture, C_org or pH of these soils. The effects of environmental influences (soil management) on the microbial pool in terms of a changing energy demand are discussed.     

Tillage and residue management practices affect soil biological indicators in a rice–wheat cropping system in north-western India

Agricultural productivity relies on a wide range of ecosystem services provided by the soil biota. Sustainable management practices, such as tillage and residue management, can influence structure and function of the soil microbiota, with direct consequences for the associated ecosystem services. Although there is increasing evidence that different tillage regimes alter the soil biological indices, we only have a limited understanding of their temporal changes in a rice (Oryza sativa L.)–wheat (Triticum aestivum L.) cropping system. We evaluated the effects of combinations of tillage, crop residue management and green manuring on soil biological indicators after 5 years of the practising rice–wheat system (RWS). Four main plot treatments in rice included the following: (a) PTR_W0, puddled transplanted rice with no wheat straw retained; (b) PTR_W25, puddled transplanted rice with 25% anchored wheat stubbles retained; (c) PTR_W0 + Sesbania aculeate L. green manure (GM); and (d) PTR_W25+GM, puddled transplanted rice with 25% anchored wheat stubbles retained+ GM. There were three subplot treatments in the subsequent wheat crop: (a) CTW_R0, conventional tillage wheat with rice residue removed; (b) ZTW_R0, zero tillage wheat with rice residue removed; and (c) ZTW_R100, ZTW with 100% rice residue retained as mulch. The PTR_W25+GM treatment, followed by ZTW_R100, significantly increased soil microbial biomass carbon, basal soil respiration, microbial quotient and mineralization quotient measured during wheat-growing season. These biological indicators were higher at vigorous vegetative wheat growth stage than at flowering stage and decreased at maturity. The principal component analysis of the assayed variables showed that all the variables significantly contributed to the variability in parameters examined and were more related to maximum tillering stage of wheat growth than to maturity or at sowing of wheat. Three highly effective biological indicators were microbial biomass carbon, microbial quotient and mineralization quotient, which responded significantly to changes in tillage and residue management practices in the RWS. We conclude that crop residues and green manure have significant to improve soil biochemical processes by improving soil organic carbon and soil biological indicators in rice–wheat cropping system.     

Long-term tillage effects on the distribution patterns of microbial biomass and activities within soil aggregates

The effects of tillage on the interaction between soil structure and microbial biomass vary spatially and temporally for different soil types and cropping systems. We assessed the relationship between soil structure induced by tillage and soil microbial activity at the level of soil aggregates. To this aim, organic C (OC), microbial biomass C (MBC) and soil respiration were measured in water-stable aggregates (WSA) of different sizes from a subtropical rice soil under two tillage systems: conventional tillage (CT) and a combination of ridge with no-tillage (RNT). Soil (0–20 cm) was fractionated into six different aggregate sizes (> 4.76, 4.76–2.0, 2.0–1.0, 1.0–0.25, 0.25–0.053, and < 0.053 mm in diameter). Soil OC, MBC, respiration rate, and metabolic quotient were heterogeneously distributed among soil aggregates while the patterns of aggregate-size distribution were similar among properties, regardless of tillage system. The content of OC within WSA followed the sequence: medium-aggregates (1.0–0.25 mm and 1.0–2.0 mm) > macro-aggregates (4.76–2.0 mm) > micro-aggregates (0.25–0.053 mm) > large aggregates (> 4.76 mm) > silt + clay fractions (< 0.053 mm). The highest levels of MBC were associated with the 1.0–2.0 mm aggregate size class. Significant differences in respiration rates were also observed among different sizes of WSA, and the highest respiration rate was associated with 1.0–2.0 mm aggregates. The C_mic/C_org was greatest for the large-macroaggregates regardless of tillage regimes. This ratio decreased with aggregate size to 1.0–0.25 mm. Soil metabolic quotient (qCO₂) ranged from 3.6 to 17.7 mg CO₂ g^− 1 MBC h^− 1. The distribution pattern of soil microbial biomass and activity was governed by aggregate size, whereas the tillage effect was not significant at the aggregate scale. Tillage regimes that contribute to greater aggregation, such as RNT, also improved soil microbial activity. Soil OC, MBC and respiration rate were at their highest levels for 1.0–2.0 mm aggregates, suggesting a higher biological activity at this aggregate size for the present ecosystem.     

The effect of tropical forest conversion on soil microbial biomass

We investigated the effects of converting forest to savanna and plough land on the microbial biomass in tropical soils of India. Conversion of the forest led to a significant reduction in soil organic C (40–46%), total N (47–53%), and microbial biomass C (52–58%) in the savanna and the plough land. Among forest, savanna, and plough land, basal soil respiration was maximum in the forest, but the microbial metabolic quotient (qCO₂ was estimated to be at a minimum in the forest and at a maximum in the plough land.     

Soil quality response to tillage and crop residue removal under subarctic conditions

Little is known about the long-term effects of tillage and crop residue management on soil quality and organic matter conservation in subarctic regions. Therefore, we quantified wet aggregate stability, bulk density, pH, total organic C and N, inorganic N, microbial biomass C and N, microbial biomass C:N ratio, microbial quotient, and potential C and N mineralization for a tillage/crop residue management study in central Alaska. Soil from no-till (NT), disked once each spring (DO), and disked twice (DT, spring and fall) treatments was sampled to 20 cm depth in spring and fall of the 16th and 17th years of the study. Crop residues were either retained or removed after harvest each year. Reducing tillage intensity had greater impact on most soil properties than removing crop residues with the most notable effects in the top 10 cm. Bulk density was the only indicator that showed significant differences for the 10–20 cm depth, with values of 0.74 Mg m⁻³ in the surface 10 cm in NT compared to 0.86 in DT and 1.22 Mg m⁻³ in NT compared to 1.31 in DT for the 10–20 cm depth. Wet aggregate stability ranged from 10% in DT to 20% in NT. Use of NT or DO conserved soil organic matter more than DT. Compared to measurements made in the 3rd and 4th years of the study, the DT treatment lost almost 20% of the soil organic matter. Retaining crop residues on the soil conserved about 650 g m⁻² greater C than removing all residues each year. Soil microbial biomass C and mineralizable C were highest in NT, but the microbial C quotient, which averaged only 0.9%, was not affected by tillage or crop residue treatment. Microbial biomass C:N ratio was 11.3 in DT and 14.4 in the NT, indicating an increasing predominance of fungi with decreasing tillage intensity. Barley grain yield, which averaged 1980 kg ha⁻¹ over the entire 17 years of the study, was highest in DO and not significantly different between NT and DT, but weeds were a serious problem in NT. Reduced tillage can improve important soil quality indicators and conserve organic matter, but long-term NT may not be feasible in the subarctic because of weed problems and build up of surface organic matter.     

The influence of tillage systems on soil organic matter and soil hydrophobicity

Management practices including various tillage systems influence quantity and composition of soil organic matter (SOM). Parameters for evaluating both the SOM quantity (organic C [C_ox], total N [N_t]) and quality (microbial biomass C, hydrophobic and hydrophilic organic components) were determined in soil samples, taken from two soil depths (0–0.1 m and 0.1–0.3 m) in a field experiment in the period 2001–2007, with different tillage systems. The experiment, founded in 1995 in Prague-Ruzyně, includes conventional soil tillage (CT) plus some selected methods of conservation tillage: (a) no tillage (NT), (b) no tillage + mulch (NTM), and (c) minimum tillage with pre-crop residues incorporated (MTS). C_ox and microbial biomass C contents increased significantly with conservation tillage as compared to CT in 0–0.1 m layer, non-significant increase was found in 0.1–0.3 m layer. N_t increased non-significantly in both layers. Along with the depth of sampling, the content of the characterized parameters decreased in all variants; but the decrease in the conventionally tilled variant was, for the most part, lower than in the conservation tillage. The functional hydrophobic and hydrophilic groups of soil organic matter were identified by Fourier transform infrared (FTIR) spectroscopy, and the hydrophobic/hydrophilic group intensities ratio was calculated as the parameter of soil hydrophobicity. A higher soil hydrophobicity existed in all three conservation tillage treatments compared to CT due to the significantly higher content of hydrophobic organic components. C_ox correlated significantly with microbial biomass C, N_t, hydrophobic components, and soil hydrophobicity (R = 0.552–0.654; P < 0.05). Hydrophilic components did not correlate with other soil characteristics, with the exception of hydrophobic components. These data show that shifting from CT to the conservation tillage systems increased the content of SOM in top soil layer in relatively short time, improved the SOM quality and increased soil hydrophobicity in the condition of experiment.     

Determination of the fate of C labelled maize and wheat rhizodeposit-C in two agricultural soils in a greenhouse experiment under C-CO2-enriched atmosphere

A deeper understanding of the contribution of carbon (C) released by plant roots (rhizodeposition) to soil organic matter (SOM) can help to increase our knowledge of global C-cycling. These insights can eventually lead to sustainable management of SOM especially in agricultural systems. This study was conducted to determine the fate of ¹³C labelled rhizodeposit-C of maize and wheat plants. They were grown in a greenhouse in permeable nylon bags filled with upper soil material from two agricultural soils of the same location, but with different crop yields. The bags were placed into pots, which were also filled with soil surrounding the bags. Soil inside the bags was considered as rhizosphere soil, wheras the one outside the bags represented bulk soil. The contributions of rhizodeposits to water extractable organic carbon (WEOC), microbial biomass-C (MB-C), CO₂-C evolution, and total organic carbon (C_org) were investigated during a 7-week growing period. The WEOC, MB-C, CO₂-C, C_org contents and the respective δ¹³C values were determined regularly, and a newly developed method for determining δ¹³C values in soil extracts was applied.In both soils, regardless of crop yield potential, significant incorporation of rhizodeposition-derived C was observed in the MB-C, CO₂-C, and C_org pool, but not in the WEOC. The pattern of C incorporation into the different pools was the same for both soils with both plants, and rhizodeposit-derived C was recovered in the order MB-C<C_org<CO₂-C. This showed that rhizodeposits were mainly respired, but since C_org was the second largest pool of the overall balances, they were also stabilized in the soils at least in the short term. It is suggested that the increased SOM mineralization observed in this study (positive priming effects) was probably induced by C exchange processes between the soil matrix and soluble rhizodeposits. Moreover, soluble rhizodeposit-C was detected in MB-C and CO₂-C evolved outside the direct root zone, showing the availability of these C-components in the bulk soil.     

Effect of paclobutrazol on microbial biomass,respiration and cellulose decomposition in soil

Paclobutrazol is a plant growth regulator largely utilized in mango cultivation and usually applied directly to soil. The aim of this study was to examine the effect of paclobutrazol on soil microbial biomass, soil respiration and cellulose decomposition in Brazilian soils under laboratory conditions. Soil samples were collected from fields with and without a reported history of paclobutrazol application. A solution of paclobutrazol (8 mg of active ingredient kg^?1 of soil) was added to soils, which were then incubated at 28 °C for 30 days. Paclobutrazol decreased soil microbial biomass, soil respiration and cellulose decomposition in soil with and without a report of paclobutrazol application, while significant increase was observed in the respiratory quotient (qCO₂). Our results show that the soil microbiological attributes were negatively affected by paclobutrazol in short-term experiment.     

Bioavailability and effects of heavy metals on soil microbial biomass survival during laboratory incubation

In this work we studied the influence of Pb, Zn, and Tl on microbial biomass survival and activity during a laboratory incubation of soil. In comparison to uncontaminated soil, the microbial biomass C decreased sharply in soil contaminated with Zn and Tl, whereas the addition of Pb did not have any significant inhibitory effect on the level of microbial biomass C. Zn displayed the greatest biocidal effect, confirmed by the measurement of the death rate quotient (q D). The microbial activity, measured as CO₂ evolution, increased significantly in contaminated soils, emphasizing the need of living organisms to expend more energy to survive. The greater demand for energy by microorganisms in order to cope with the toxicity of pollutants was also confirmed by measurement of the metabolic quotient (q CO₂). In order to determine whether soil microorganisms affect the bioavailability of these metals through their mobilization and release, we studied the relationships between available Pb, Zn, and Tl, and microbial biomass C. The water-soluble fraction of Tl, available Tl, and Zn, and microbial biomass C were related significantly, but not Pb.     

Bacterial community structure and microbial activity in different soils amended with biogas residues and cattle slurry

Anaerobic digestion of organic materials generates residues of differing chemical composition compared to undigested animal manures, which may affect the soil microbial ecosystem differently when used as fertilizers. This study investigated the effects of two biogas residues (BR-A and BR-B) and cattle slurry (CS) applied at rates corresponding to 70 kg NH₄⁺-N ha⁻¹ on bacterial community structure and microbial activity in three soils of different texture (a sandy, a clay and an organic clay soil). 16S rRNA genes were targeted in PCR reactions and bacterial community profiles visualized using terminal restriction fragment length polymorphism. General microbial activity was measured as basal respiration (B-resp), substrate-induced respiration (SIR), specific growth rate (μ_SIR), metabolic quotient (qCO₂) and nitrogen mineralization capacity (NMC). Non-metric multidimensional scaling analysis visualized shifts in bacterial community structure related to microbial functions. There were significant differences in bacterial community structure after 120 days of incubation (+20 °C at 70% of WHC) between non-amended (control) and amended soils, especially in the sandy soil, where CS caused a more pronounced shift than biogas residues. Terminal-restriction fragment (TRF) 307, the predominant peak in CS-amended sandy soil, was identified as possibly Bacillus or Streptococcus. TRF 226, the dominant peak in organic soil amended with BR-B, was classified as Rhodopseudomonas. B-resp significantly increased and SIR decreased in all amendments to organic soil compared with the control, potentially indicating decreased efficiency of heterotrophic microorganisms to convert organic carbon into microbial biomass. This was also reflected in an elevated qCO₂ in the organic soil. The μ_SIR level was higher in the sandy soil amended with BR-A than with BR-B or CS, indicating a shift toward species capable of rapidly utilizing glucose. NMC was significantly elevated in the clay and organic soils amended with BR-A and BR-B and in the sandy soil amended with BR-B and CS. Thus, biogas residues and cattle slurry had different effects on the bacterial community structure and microbial activity in the three soils. However, the effects of biogas residues on microbial activities were comparable in magnitude to those of cattle slurry and the bacterial community structure was less affected. Therefore, we do not see any reason not to recommend using biogas residues as fertilizers based on the results presented.