Small mammals in agricultural landscapes: Opposing responses to farming practices and landscape complexity

Organic farming often counteracts the decline of various taxa owing to agricultural intensification, but little is known about the relative importance of local management and landscape context for small mammals. We examined the abundance, species richness and diversity of small mammal communities in 22 organically and conventionally managed winter wheat fields pairwise located along a gradient of landscape structural complexity (41–94% arable land). Complex landscapes significantly increased small mammal abundance and (with marginal significance) species richness and diversity, but only in conventional fields, whereas organic farming increased small mammals in simple landscapes. These results indicate the importance of landscape complexity for small mammal populations in an intensified agriculture. Analyses at multiple spatial scales (100 m, 250 m, 500 m radii around focal fields), showed opposing responses of the three most abundant species to landscape complexity. Apodemus agrarius PALLAS abundance increased with increasing landscape complexity at a spatial scale of 100 m, whereas Microtus arvalis PALLAS and Sorex araneus L. abundances decreased with increasing landscape complexity at spatial scales of 100 m and 500 m, respectively, suggesting species-specific ecological needs as well as functional spatial scales for conservation management. In conclusion, agri-environmental measures for small mammals such as organic farming are most effective in simple landscapes, while complex landscapes presumably function as source habitats and can compensate for local agricultural intensification in conventional fields.     

The efficacy of small-scale conservation efforts, as assessed on Australian golf courses

Habitat remnants on urban green-space areas (i.e. parks, gardens and golf courses) sometimes provide refuge to urban-avoiding wildlife, leading some to suggest these areas may play a role in wildlife conservation if they are appropriately designed and managed. The high densities observed on some green-space areas may however be attributed to external influences. Localised efforts to enhance the habitat value of urban green-space areas may therefore have little more than a cosmetic effect. This study investigated environmental factors influencing bird, reptile, mammal and amphibian diversity on Australian golf courses to assess the efficacy of small-scale conservation efforts. Abundance and species richness did not simply reflect local habitat qualities but were instead, partly determined by the nature of the surrounding landscape (i.e. the area of adjacent built land, native vegetation and the number of connecting streams). Vertebrate abundance and species richness were however, also associated with on-site habitat characteristics, increasing with the area of native vegetation (all vertebrates), foliage height diversity and native grass cover (birds), tree density, native grass cover and the number of hollows (mammals), woody debris, patch width and canopy cover (reptiles), waterbody heterogeneity and aquatic vegetation complexity (frogs). Localised conservation efforts on small land types can benefit urban-avoiding wildlife. Urban green-space areas can provide refuge to urban-avoiding vertebrates provided combined efforts are made at patch (management), local (design) and landscape (planning) scales.     

Spatial and temporal variations in the use of rice-paddy dominated landscapes by birds in Japan

Agricultural landscapes with spatial and temporal variations interact with each other to affect the existing biodiversity. Though rice fields provide important habitats for birds all over the world, studies so far have rarely explored the effects of landscape heterogeneity on bird species in rice paddy areas. This study investigated the effects of habitat cover and landscape variables on the species richness and the abundance of birds in rice paddy areas in Japan. Data on bird occurrence and the environment were collected at 32 grid squares (1 × 1 km) in the Tone River basin. The richness and the abundance of agricultural wetland species were particularly high in landscapes with large areas of rice fields in summer, when rice fields were irrigated, but in those with large areas of open water in winter, when rice fields were drained. It is important to maintain a combination of rice fields and open water to satisfy multiple habitat requirements by agricultural wetland species throughout the year. Grassland species were positively associated with a rich diversity of land cover including fallow fields and open water, indicating the importance of a simultaneous existence of multiple landscape elements. Forest cover in landscapes positively affected edge species and woodland species. Since forest cover had a relatively strong correlation with edge density, the responses of bird species to changes in forest cover and edge density need to be explored further. This study illustrates the importance of spatial and temporal landscape complementation for bird species in rice paddy areas.     

Spatial patterns of grasses influence soil macrofauna biodiversity in Amazonian pastures

Grasslands are often characterized by small-scale spatial heterogeneity due to the juxtaposition of grass tufts and bare ground. Although the mechanisms generating plant spatial patterns have been widely studied, few studies concentrated on the consequences of these patterns on belowground macrofauna. Our objective was to analyze the impact of grass tuft (Brachiaria bryzantha cv. marandu) spatial distribution on soil macrofauna diversity in Amazonian pastures, at a small scale (less than 9 m²). Soil macrofauna was sampled among B. bryzantha tufts, which showed a variable spatial distribution ranging from dense to loose vegetation cover. The vegetation configuration explained 69% of the variation in total soil macrofauna density and 68% of the variation in total species richness. Soil macrofauna was mainly found in the upper 10 cm of soil and biodiversity decreased with increasing distances to the nearest grass tuft and increased with increasing vegetation cover. The size of the largest grass tuft and the micro-landscape connectivity also had a significant effect on biodiversity. The density and species richness of the three principal soil ecological engineers (earthworms, ants and termites) showed the best correlations with vegetation configuration. In addition, soil temperature significantly decreased near the plants, while soil water content was not influenced by the grass tufts. We conclude that soil macrofauna diversity is low in pastures except close to the grass tufts, which can thus be considered as biodiversity hotspots. The spatial arrangement of B. bryzantha tussocks influences soil macrofauna biodiversity by modifying soil properties in their vicinity. The possible mechanisms by which these plants could affect soil macrofauna are discussed.     

Factors affecting site occupancy by woodland bird species of conservation concern

Significant biodiversity loss is characteristic of agricultural landscapes worldwide. Biodiversity recovery efforts in such landscapes can be hamstrung by a paucity of information on factors affecting species’ distributions, particularly for threatened and/or declining species. The temperate woodlands of south-eastern Australia have been extensively modified for agriculture and numerous bird taxa are declining. We have explicitly identified habitat and landscape attributes of woodland remnants affecting site occupancy by 13 woodland bird species of conservation concern.Using case-control data and linear logistic regression, we found that site occupancy for each species was related to both habitat and landscape variables. Habitat variables of particular importance included those in the ground layer (an abundance of leaf litter, an intact surface crust of mosses and lichens and a scarcity of annual grasses) and overstorey (a scarcity of eucalypt dieback and an abundance of mistletoe). Landscape variables strongly affecting site occupancy included the number of paddock trees and the area of native grass within 500 m of a site. Many of our study species were found most often in regrowth remnants.Our findings indicate a gap between current conservation practices and the actual habitat requirements of woodland bird species of conservation concern. Successful management will require protection and/or rehabilitation of the ground layer and overstorey of woodland remnants and sympathetic management of the surrounding landscape. It also will require managers to go beyond current practices of conserving old growth remnants and establishing replantings to maintaining and creating stands of woodland regrowth.     

Mapping community change in modified landscapes

Habitat loss is not randomly distributed across modified landscapes, yet spatial patterns of habitat cover are not routinely combined with biodiversity data when assessing or predicting the biodiversity impacts of land use change. Here, we convert point observations of more than 28,000 beetles from 851 species into a continuous biodiversity surface representing the similarity of ecological communities relative to that of pristine forest, effectively integrating on-the-ground biodiversity data with remotely sensed land cover data to predict the magnitude of community change in a modified landscape. We generated biodiversity surfaces for both present-day and pre-human landscapes to map spatial patterns of change in a diverse ecological community to calculate the combined biodiversity impacts of habitat loss and fragmentation that accounts for the exact spatial pattern of deforestation. Our spatially-explicit, landscape-scale index of community change shows how the fine-scale configuration of habitat loss sums across a landscape to determine changes in biodiversity at a larger spatial scale. After accounting for naturally occurring within-forest heterogeneity, we estimate that the conversion of 43% of forest to grassland in a 1300 km² landscape in New Zealand resulted in a 47% change to the beetle community.     

The role of forest structure, fragment size and corridors in maintaining small mammal abundance and diversity in an Atlantic forest landscape

Using the abundance and distribution of small mammals at 26 sites in an Atlantic forest landscape, we investigated how species abundance and alpha and beta diversity are affected by fragment size and the presence of corridors. To account for the variability in forest structure among fragments, we described and minimized the influence of foliage density and stratification on small mammal data. Sites were distributed among three categories of fragment size and in continuous forest. For small and medium-sized categories, we considered isolated fragments and fragments connected by corridors to larger remnants. Small mammal abundance and alpha and beta diversity were regressed against site scores from the first axis of a Principal Component Analysis on forest structure variables. Residuals were used in analyses of variance to compare fragment size and connectivity categories. Forest structure influenced total abundance and abundance of some species individually, but not the diversity of small mammal communities. Total abundance and alpha diversity were lower in small and medium-sized fragments than in large fragments and continuous forest, and in isolated compared to connected fragments. Three species were less common, but none was more abundant in smaller fragments. At least one species was more abundant in connected compared to isolated fragments. Beta diversity showed an opposite relationship to fragment size and corridors, increasing in small and isolated fragments. Results highlight the importance of secondary forest for the conservation of tropical fauna, the hyper-dynamism of small isolated fragments and the potential of corridors to buffer habitat fragmentation effects in tropical landscapes.     

Effects of non-cropped landscape diversity on spatial dynamics of farmland birds in intensive farming systems

Increasing habitats diversity in agricultural landscapes has been proposed as a key measure for reversing the decline of farmland biodiversity in Europe. However, indicators used for assessing such a potential compensation effect usually only rely on species diversity and abundance while ignoring variations in species-specific vulnerability. The extent to which habitat diversity may reverse the decline of specialist species in Europe to farming systems is thus still unclear. In this study, we investigate whether the effect of non-cropped habitat diversity on farmland birds’ occurrences was dependent on species’ specialization for habitats. In particular, we focused on the relative effects of non-cropped habitat diversity on species’ abilities to persist or to colonize new vacant areas. We used a capture-recapture statistical framework to study the spatial dynamics of 20 farmland bird species in France monitored from 2001 to 2007. We found that non-cropped landscape diversity reduces both the probabilities that a species becomes extinct locally and that a species colonizes new vacant areas, and the occupancy rate. Although this suggests a possible stabilizing effect of the surrounding habitat diversity on species occurrence in farming systems, the occupancy was only weakly affected. Moreover, we found that the most specialist species were the more negatively affected by this landscape diversity in terms of colonization abilities. We argue that accounting for the differences in habitat specialization among farmland species can improve conservation policies dedicated to the management of landscape diversity.     

Land use and habitat gradients determine bird community diversity and abundance in suburban, rural and reserve landscapes of Minnesota, USA

Bird species’ community responses to land use in the suburbanizing Twin Cities, Minnesota, USA, were contrasted among reserves, rural lands, and suburbs. For each land use type, bird composition, diversity, and abundance were recorded for 2 years in ≈99 plots in three sampling units (each ≈4500 ha). A habitat gradient defined by canopy structure (grasslands to savannas to forests) was influenced by land use, so ≈300 plots were used to characterize simultaneous variation in bird communities along land use and habitat gradients. At broad scales (aggregate of 33 plots covering ≈4500 ha) suburbs supported the lowest bird richness and diversity and rural landscapes the most, with reserves slightly below rural. Although reserves were like rural lands in diversity of bird communities, they supported more species of conservation concern, particularly of grasslands and savannas. Differences among land use types varied with habitat structure. Suburbs, rural lands, and reserves had similar forest bird communities, but differed in grassland and savanna bird communities. The extensive rural forests are important for the region’s forest birds. Suburban grasslands and savannas had low shrub abundance, low native bird richness and high non-native bird richness and abundance. However, total bird richness and diversity were as high in suburban as in rural and reserve plots because high native richness in suburban forests and high non-native species richness in suburban grasslands and savannas compensated for lower native richness in suburban grasslands and savannas. Bird conservation here and in the Midwest USA should protect rural forests, expand grasslands and savannas in reserves, and improve habitat quality overall.     

Regrowth and revegetation in temperate Australia presents a conservation challenge for reptile fauna in agricultural landscapes

Secondary vegetation, associated with changes in land use, presents a conservation issue in the preservation of biological diversity in agricultural landscapes. We examine the interactive effect of eucalypt regrowth and rock habitat on reptile species richness and assemblage structure in fragmented agricultural landscapes in south-eastern Australia. Zoogeographic and geomorphic factors influenced species richness and community composition. Saxicolous and arboreal species were less abundant in grassy woodland regrowth, whereas Bassian and fossorial species responded positively to forest regrowth (and tree plantings). Regrowth with rock habitat had higher reptile richness, and more old growth-associated taxa, than regrowth without rock habitat. Thus, the presence of saxicolous habitat can reduce the time required for regrowth to attain a climax community structure and elements of old growth fauna. However, in the absence of vegetation management, secondary vegetation can reduce habitat suitability for a broad range of reptiles. In agricultural landscapes historically supporting savannah-like vegetation, habitat manipulation may be necessary to maintain reptile diversity. Furthermore, tree plantings in temperate agricultural landscapes should aim to restore historical vegetation composition and structure, thereby reflecting the habitat requirements of extant species and facilitating evolutionary processes. In grassy woodland ecosystems, this may involve heterogeneous plantings which emulate natural levels of canopy cover and solar penetration. Maintaining biodiversity in agricultural landscapes will therefore involve managing trade-offs to preserve areas of dense regeneration for regrowth-dependant fauna, while at the same time, creating open-canopy environments to enhance habitat for ectothermic organisms.     

东北平原典型玉米种植区农业景观植物多样性研究——以昌图县为例

非耕作生境是农业景观中的重要组成部分,为生物提供食物和栖息地,对生物多样性保护具有重要意义。本文以辽宁省昌图县为例,选取了20个非耕作生境比例为0~50%的网格(1 km?1 km)为样区,采用典型样地法对调查区域内农业景观中的林地、田间路、草地、沟渠、果园5类主要非耕作生境中的植物群落进行调查,探讨不同非耕作生境类型和比例中植物多样性及其与景观异质性之间的关系。研究结果表明,随着非耕作生境比例增加,植物物种多样性和均匀度先增加后减小,在20%~30%时达到峰值;非耕作生境比例在0~40%范围内时,植物物种丰富度同样呈现先增加后减小,且在20%~30%时达到峰值;非耕作生境比例高于40%时,植物物种丰富度再次出现峰值且高于20%~30%。随着非耕作生境比例的增加,农业景观香浓多样性、香浓均匀度指数和景观斑块形状复杂程度逐渐增加,蔓延度恰好相反。不同生境中重要值最高的均为禾本科植物,但植物种不同;优势种优势度为果园沟渠草地田间路林地。果园、草地和沟渠的物种多样性和均匀度指数显著高于林地和田间路,丰富度指数为草地林地沟渠果园田间路,且草地、果园和田间路的不同调查区域间植物群落指数存在较大的变异性。草地、果园、沟渠、田间路和林地中景观异质性与物种多样性相关性顺次降低。研究结论表明,东北平原典型玉米种植区农业景观中,最适宜非耕作生境比例为20%~30%;非耕作生境中林地、沟渠对物种多样性维持、湿生植物多样性保护具有积极作用;不同生境干扰类型和方式不同,景观异质性与植物物种多样性相关性程度也不同。在今后农业景观生物多样性保护中应综合考虑非耕作生境的类型和比例,干扰的类型和方式等多种因素对生物多样性、生态服务及农业产量的影响。     

Habitat destruction by collectors associated with decreased abundance of rock-dwelling lizards

Declines in biodiversity caused by habitat loss have been well documented on large spatial scales, however, effects of habitat loss on small scales have received little attention. Some common methods of reptile collection, primarily for commercial harvest, result in destruction of cracks, crevices, and other cool, moist microhabitats in desert rock outcrops. We developed a method for identifying habitat destruction associated with reptile collecting. We surveyed lightly and heavily disturbed areas near Phoenix, Arizona to determine if microhabitat loss caused by collectors was associated with decreased relative abundance of reptiles. Of four diurnal lizard species studied, relative abundance of two rock-dwelling species was negatively correlated with level of microhabitat destruction, whereas relative abundance of one ground-dwelling species and one habitat generalist species was not. Habitat destruction caused by collectors may have negative effects, not only at the individual level, but at the population and community levels as well. We recommend regulation of commercial trade in reptiles; disallowing collecting activities that cause habitat damage; increased law enforcement; and educational programs directed primarily at novice collectors.     

Environmental monitoring using populations of birds and small mammals: Analyses of sampling effort

Characteristics of bird and small mammal communities can be valuable in monitoring for impacts on specific plots of land. In Utah (USA), significant differences were found among years, habitats and seasons in bird and small mammal abundance, species diversity, and species richness; thus, estimates of these characteristics are consistent and repeatable and can be used for detecting change. Also, bird and small mammal communities are dependent on a wide variety of food resources and habitat characteristics; thus they should reflect a variety of impacts.A comparison is made between two methods of handling bird data from transects: enumeration (individual birds per km) and density (birds per unit area). Correlation between the two was high (r = 0·93). However, density estimates may be necessary to trace an impact to a particular group, guild or species and possibly to its cause.An analysis is made of how much sampling is necessary to make an adequate estimate of the characteristics of bird and small mammal communities. Estimates of bird abundance, species richness and species diversity (from enumeration) may be obtained with three repetitions of 2 km of transect. Three repetitions are also sufficient to estimate abundance of small mammals on 12 by 12 trapping grids. To estimate species richness and species diversity, however, four or more repetitions are needed. Small mammal community characteristics are not well predicted by trapping on transects or small grids except in grids 9 by 9 or larger. These results of sampling effort may only apply to certain habitats but data from bird and small mammal communities should be useful in environmental monitoring at any site.     

Habitat-based conservation priorities for carabid beetles within the Picos de Europa National Park, northern Spain

Quick biodiversity studies on poorly studied taxa and areas are increasingly popular for setting conservation priorities over a wide range of spatial scales. However, the implementation of such studies is complicated by the variable extent to which the different criteria used in prioritisation are correlated to each other. Using methods of constrained ordination, we examined the species-habitat relationships of carabid beetles based on ground beetle assemblages from 22 sites in the Picos de Europa National Park, northern Spain. We found characteristic species assemblages for subalpine meadows, Genista shrublands, and pastures, whereas mown meadows, heathlands, beech and riparian woodlands were occupied by more habitat generalist species. Species associated with subalpine meadows and Genista shrublands tended to be mostly brachypterous and to have geographic ranges restricted to northern Spain. In contrast, we found no relationship between the degree of species' association with pastures and geographic range-wing size type. Although the species richness was higher in riparian woodlands and mown meadows, we suggest a higher conservation value for subalpine meadows and Genista shrublands across the landscape because they sustain characteristic assemblages dominated by species with restricted ranges and reduced powers of dispersal. Our study suggests that preserving areas in the landscape supporting higher biodiversity will not necessarily preserve those species potentially more susceptible to habitat loss and fragmentation. It also supports the feasibility of biodiversity studies based on multivariate techniques for setting conservation priorities over complex landscapes.     

Small mammals in agricultural landscapes of Prince Edward Island (Canada): Effects of habitat characteristics at three different spatial scales

We examined the influence of habitat characteristics at the microhabitat, macrohabitat, and landscape spatial scales on small mammals occurring in 12 forest patches within four agricultural landscapes of Prince Edward Island (Canada). Landscape features were important determinants of small mammal variables at all levels, but especially at the community level, whereas microhabitat characteristics tended to influence small mammals at the population level. Macrohabitat characteristics had only minor effects on small mammals occurring in our study sites. Species richness was most strongly influenced by patch area, reaching a threshold at forest patches of roughly 8-10 ha. The proportions of both forest and hedgerow cover within 400 m from the study site were also significant determinants of small mammals species diversity, possibly reflecting their ability to perceive suitable habitats, forage in areas outside the forest patches, and/or disperse in agricultural landscapes. At least one small mammal species (Napaeozapus insignis) benefitted from the presence of agricultural fields at distances up to 1000 m. Tamias striatus benefitted from the presence of hedgerow cover within 400 m from forest patches, possibly allowing them to move between forest patches. Clearly, the maintenance of forest patches of 8-10 ha and of forest cover within 400 m from them is fundamental for the conservation of small mammals inhabiting agricultural landscapes on the Island. Conservation strategies should also consider the establishment of more effective regulations to prevent and/or reduce hedgerow removal on Prince Edward Island.     

Conserving ground-dwelling beetles in an endangered woodland community: Multi-scale habitat effects on assemblage diversity

Patterns of biodiversity are influenced by habitat features at multiple spatial scales, yet few studies have used a multi-scale approach to examine ground-dwelling beetle diversity patterns. We trapped and quantified ground-dwelling beetle assemblages at two spatial scales: (1) microhabitat elements, represented by open ground, ground under trees and ground next to logs and (2) macrohabitat, represented by three vegetation types in a box-gum grassy woodland in south-eastern Australia. Species richness and evenness was highest at samples from under trees and lowest at samples in the open. At the macrohabitat scale, species richness and evenness did not differ among vegetation types. Assemblage composition was significantly different between trees, logs and open elements. Assemblage composition was different only between vegetation types with contrasting high and low shrub cover. Estimation of true species richness indicated assemblages at logs may have a higher number of species compared to trees and open elements, and implied greater spatial heterogeneity in assemblages at logs. Significant spatial autocorrelation in beetle assemblages was detected for logs at up to 400 m, but not for ground under trees or in the open. In agreement with previous studies, a mix of vegetation types at the macrohabitat scale is important for beetle conservation. Assemblage composition, however, appears to be more closely linked with habitat elements at the microhabitat scale, where logs support a high diversity of beetle species. This strongly supports the idea that restoring logs to box-gum grassy woodlands would be useful for increasing beetle species richness and assemblage heterogeneity.     

Is land abandonment having an impact on biodiversity? A meta-analytical approach to bird distribution changes in the north-western Mediterranean

Teasing out how species respond to human-induced environmental changes has become a priority for addressing the challenges posed by the need to conserve biodiversity. Although land abandonment is widespread, the threat it can represent to biodiversity remains poorly understood. To address this issue, we used data from eight long-term studies in a region with widespread land abandonment that has been identified as a biodiversity hotspot, the north-west Mediterranean Basin. We conducted a multi-site analysis of how changes in species occurrence were affected by species’ attributes (habitat preference, habitat breadth, migration strategy and latitudinal distribution). The analysis revealed a nested pattern in the effect of species attributes. Woodland and shrubland species showed the strongest increase, whereas no change in overall occurrence patterns was detected in farmland species. Residents increased significantly, especially those with a northern distribution, whereas migrants decreased significantly, especially farmland species with a narrow habitat breadth. Changes in species occurrence were also related to initial landscape composition, with larger increases in initially woodland or mixed landscapes. Woodland species increased in all landscape types, shrubland species increased only in mixed landscapes, and farmland species decreased more, although not significantly, in farmland landscapes. Our results strongly support the hypothesis that large-scale habitat changes associated mainly with land abandonment are impacting bird community patterns in the Mediterranean region. Negative effects seem to be recorded mostly for migrants in farmland landscapes, suggesting that declines in these species are likely to be caused by a variety of mechanisms interacting with habitat change in the breeding region.     

Landscape complexity differentially affects alpha, beta, and gamma diversities of plants occurring in fencerows and crop fields

Agro-ecosystems still retain part of the original biodiversity, although agricultural intensification threatens to eliminate refuge patches from farmland mosaics. Landscape complexity resulting from networks of uncultivated corridors associated with fencerows may play a key role in sustaining biodiversity across scales, and may further influence diversity in adjacent, cultivated fields. We evaluated the relationship between farmland complexity and plant diversity of fencerows and crop fields at local and landscape scales in the Rolling Pampas of Argentina. We surveyed 222 fencerows and fields cultivated with winter or summer crops, and characterised farmland complexity by the perimeter/area ratio of cropland in 2-km diameter circles surrounding each field. Plant diversity was additively partitioned into alpha, beta, and gamma components. Fencerows had noticeably higher richness than cropped fields at local and landscape scales. Gamma and beta diversities of fencerows and fields were positively related to farmland complexity, supporting the role of spatial heterogeneity in maintaining plant diversity in agro-ecosystems. Landscape complexity did not influence alpha diversity of fencerows but significantly increased diversity within fields, a likely result of enhanced mass effects from uncultivated habitats in more varied farmland. More complex landscapes contained greater gamma diversity of exotic perennials in fencerows, and of exotic and native annuals within fields. Importantly, alpha and gamma diversities of native perennials from the pristine Pampa grassland increased with landscape complexity within cropped fields. In the face of ongoing landscape homogenisation under agricultural intensification, maintaining fencerow networks may become critical for conserving habitat heterogeneity and farmland biodiversity.