Chinook salmon impede Atlantic salmon conservation in Lake Ontario

Abstract – Non-native species can have substantial impacts on successful restoration of native species. Here, we examined effects of chinook salmon ( Oncorhychus tshawytscha ), an exotic species introduced to Lake Ontario to enhance recreational angling, on reintroduced Atlantic salmon ( Salmo salar ) in a Lake Ontario tributary stream. Field enclosure studies revealed that adult Atlantic salmon activity rate was elevated, nest establishment delayed and mortality rates higher in the presence of chinook salmon. These results suggest that chinook salmon in Lake Ontario streams during fall spawning could impede successful re-establishment of Atlantic salmon in the lake.     

Effects of exotic salmonids on juvenile Atlantic salmon behaviour

Abstract –  We examined the effects of two salmonid species, chinook salmon ( Oncorhynchus tschwaytscha ) and brown trout ( Salmo trutta ), both exotic species to Lake Ontario, on behaviour and foraging success of juvenile Atlantic salmon ( S. salar ), a native species to Lake Ontario, in an artificial stream. We found that both exotic species have effects on Atlantic salmon behaviour, but that neither had an effect on foraging success. These results may explain why the Atlantic salmon re-introduction programme in Lake Ontario has had little success, as more than 3 million exotic salmonids are released in Lake Ontario streams annually.     

Competitive interactions among multiple non‐native salmonids and two populations of Atlantic salmon

Competitive interactions with non‐native species can have negative impacts on the conservation of native species, resulting in chronic stress and reduced survival. Here, juvenile Atlantic salmon (Salmo salar) from two allopatric populations (Sebago and LaHave) that are being used for reintroduction into Lake Ontario were placed into semi‐natural stream tanks with four non‐native salmonid competitors that are established in Ontario streams: brown trout (S. trutta), rainbow trout (Oncorhynchus mykiss), Chinook salmon (O. tshawytscha) and coho salmon (O. kisutch). Brown trout and rainbow trout reduced the survival and fitness‐related traits of Atlantic salmon, whereas Chinook salmon and coho salmon had no impact on these traits. These data support theories on ecological niche overlap and link differences in observed aggression levels with competitive outcomes. Measurements of circulating hormones indicated that the Atlantic salmon were not chronically stressed nor had a change in social status at the 10‐month time point in the semi‐natural stream tanks. Additionally, the Sebago population was better able to coexist with the non‐native salmonids than the LaHave population. Certain populations of Atlantic salmon may thus be more suitable for some environments of the juvenile stream phase for the reintroduction into Lake Ontario.     

The effect of competition among three salmonids on dominance and growth during the juvenile life stage

Although non‐native species can sometimes threaten the value of ecosystem services, their presence can contribute to the benefits derived from the environment. In the Great Lakes, non‐native brown trout (Salmo trutta) and rainbow trout (Oncorhynchus mykiss) support substantial recreational fisheries. With current efforts underway to restore once‐native Atlantic salmon (Salmo salar) to Lake Ontario, there is some concern that Atlantic salmon will impede non‐native contributions to the recreational fishery because Atlantic salmon exhibit niche overlap with brown trout and rainbow trout, particularly during the juvenile life stage. We therefore examined competition and growth of juvenile Atlantic salmon, brown trout and rainbow trout in semi‐natural streams. We found that brown trout were the most dominant and had the greatest growth rate regardless of what other species were present. Rainbow trout were more dominant than Atlantic salmon and consumed the most food of the three species. However, in the presence of brown trout, rainbow trout fed less frequently and exhibited negative growth as compared to when the rainbow trout were present with only Atlantic salmon. These data suggest that, outside of density‐dependent effects, Atlantic salmon will not impact stream production of brown trout and rainbow trout.     

Bacterial infections of Chinook salmon, Oncorhynchus tshawytscha (Walbaum), returning to gamete collecting weirs in Michigan

Herein, we describe the prevalence of bacterial infections in Chinook salmon, Oncorhynchus tshawytscha (Walbaum), returning to spawn in two tributaries within the Lake Michigan watershed. Ten bacterial genera, including Renibacterium, Aeromonas, Carnobacterium, Serratia, Proteus, Pseudomonas, Hafnia, Salmonella, Shewanella and Morganella, were detected in the kidneys of Chinook salmon (n = 480) using culture, serological and molecular analyses. Among these, Aeromonas salmonicida was detected at a prevalence of ～15%. Analyses revealed significant interactions between location/time of collection and gender for these infections, whereby overall infection prevalence increased greatly later in the spawning run and was significantly higher in females. Renibacterium salmoninarum was detected in fish kidneys at an overall prevalence of >25%. Logistic regression analyses revealed that R. salmoninarum prevalence differed significantly by location/time of collection and gender, with a higher likelihood of infection later in the spawning season and in females vs. males. Chi‐square analyses quantifying non‐independence of infection by multiple pathogens revealed a significant association between R. salmoninarum and motile aeromonad infections. Additionally, greater numbers of fish were found to be co‐infected by multiple bacterial species than would be expected by chance alone. The findings of this study suggest a potential synergism between bacteria infecting spawning Chinook salmon.     

Competitive effects between rainbow trout and Atlantic salmon in natural and artificial streams

Competition with non‐native species may impede the restoration of native species, but differences in competitive abilities among intraspecific native populations may make some populations more suitable for reintroduction than others. Here, juvenile Atlantic salmon (Salmo salar) from two allopatric populations (LaHave and Sebago) being used for reintroduction into Lake Ontario were placed into two natural stream sites differing in the presence of ecologically similar rainbow trout (Oncorhynchus mykiss). We assessed the effects of competition in the natural streams on fitness‐related traits and habitat use of the Atlantic salmon. We then compared these effects to those observed in artificial streams from a previous study. Atlantic salmon in natural streams had reduced fitness‐related traits that were associated with suboptimal microhabitats in the presence of rainbow trout, but utilised optimal microhabitats in their absence. In the presence of rainbow trout, the two Atlantic salmon populations exhibited comparable recapture proportions to each other, but the individuals from the Sebago population had better performance (body size and condition) than those from the LaHave population. Responses of both Atlantic salmon populations to competition with rainbow trout were generally similar in both direction and magnitude when compared to results from the artificial stream study. The combined results suggest that native species restoration efforts should be focused on candidate populations that are ecologically suitable to reintroduction environments, as well as on suitable habitats that do not contain exotic competitors. Moreover, this study highlights the value of controlled experiments in artificial environments for predicting fitness‐related performance in natural environments.     

Spawning distribution and abundance of a northern Chinook salmon population

Chinook salmon, Oncorhynchus tshawytscha (Walbaum), is an important biological and cultural resource in Alaska, but knowledge about Chinook salmon ecology is limited in many regions. From 2009 to 2012, spawning distribution and abundance of a northern Chinook salmon population on the Togiak River in south‐west Alaska were assessed. Chinook salmon preferred deeper mainstem channel spawning habitat, with 12% (14 of 118 tags in 2009) to 21% (22 of 106 tags in 2012) of radio‐tagged fish spawning in smaller order tributaries. Tributary spawners tended to have earlier run timing than mainstem spawners. Chinook salmon exhibited extended holding and backout (entering freshwater but returning to saltwater before completing anadromous migration) behaviours near the mouth of Togiak River, potentially prolonging their exposure to fishery harvest. Mark–recapture total annual run estimates (2010–2012) ranged from 11 240 (2011) to 18 299 (2012) fish. Exploitation of Chinook salmon ranged from 36% (2012) to 55% (2011) during the study period, with incidental fishery catches near the mouth of the river comprising the largest source of harvest.     

Interannual variability in the feeding and condition of subyearling Chinook salmon off Oregon and Washington in relation to fluctuating ocean conditions

Chinook salmon (Oncorhynchus tshawytscha) is one of several economically‐important species of salmon found in the Northeast Pacific Ocean. The first months at sea are believed to be the most critical for salmon survival, with the highest rate of mortality occurring during this period. In the present study, we examined interannual diet composition and body condition trends for late‐summer subyearling Chinook salmon caught off Oregon and Washington from 1998 to 2012. Interannual variability was observed in juvenile salmon diet composition by weight of prey consumed. Juvenile subyearling Chinook salmon were mainly piscivorous, with northern anchovy (Engraulis mordax) being especially important, making up half the diet by weight in some years. Annual diets clustered into two groups, primarily defined by their proportion of invertebrate prey (14% versus 39% on average). Diet composition was found to influence adult returns, with salmon from high‐invertebrate years returning in significantly larger numbers 2–3 yrs later. However, years that had high adult returns had overall lower stomach fullness and poorer body condition as juveniles, a counterintuitive result potentially driven by the enhanced survival of less fit individuals in better ocean conditions (top‐down effect). Ocean conditions in years with a higher percentage of invertebrates in salmon diets were significantly cooler from May to August, and bottom‐up processes may have led to a fall plankton community with a larger proportion of invertebrates. Our results suggest that the plankton community assemblage during this first fall may be critical in predicting adult returns of Chinook salmon in the Pacific Northwest.     

Stress-induced impairment of predator evasion and non-predator mortality in Pacific salmon

This study examined whether rapid recovery from stress-induced impairment in predator evasion, observed in previous studies on coho salmon, Oncorhynchus kisutch (Walbaum), was a general characteristic of different stocks of the same species and different species of Pacific salmon. We monitored stress-induced non-predator mortality, predator evasion and Cortisol concentrations of smolts of coho and spring Chinook, O. tshawytscha (Walbaum), after administration of standardized single and multiple handling stresses. Marked differences in the response to handling stress among stocks of coho and spring chinook smolts were evident, with recovery from impaired predator evasion occurring within 24 h of a 30-s handling stress for coho smolts and 24 h of a 1-min handling stress for spring chinook smolts. Differences in stress-induced non-predator mortality among stocks were also observed. The results point to the importance of screening hatchery salmonid stocks to assess differing capabilities of dealing with stress.     

Behavioral interactions between coho (Oncorhynchus kisutch) and chinook salmon (Oncorhynchus shawytscha) and prey fish species

Abstract— The predator-prey behavioral interactions between two salmon species, coho salmon ( Oncorhynchus kisutch ) and chinook salmon ( Oncorhynchus tshawytscha ), and their prey species were examined under laboratory conditions. These behaviors were studied to determine the bases for prey selection by salmon in Lake Michigan and ultimately facilitate predictions on shifts or changes in salmon diets. Chinook and coho salmon captured all prey items in the open water portion of the aquarium, and they had similar attack behaviors. Average attack swimming speeds varied from 2.6 to 3.6 m/s, and average escape swimming speeds varied from 2.6 to 2.9 m/s. There were no significant differences in attack swimming speeds and escape swimming speeds. There was a significant difference in median reactive distances between the prey captured and those that escaped. There was no reactive distance (0.00 m) for 96% and 98% of the successfully captured prey by chinook and coho salmon, respectively. Only 4% and 10% of the unsuccessful attacks by chinook and coho salmon, respectively, had no reactive distance (0.00 m). Salmon would repeatedly attack a school and capture individuals separated from the school. Alewives, bloaters and fathead minnows were easy prey because they remained in the open water portion of the aquarium and stayed in schools until only a few individuals remained. The schooling behavior of spottail shiners and emerald shiners was an effective anti-predation tactic against salmon attacks. After some experience with yellow perch, salmon were reluctant to attack them and would often break off attacks on them. When coho salmon were presented with different proportions of bloaters and yellow perch, they significantly attacked and captured bloaters in preference to yellow perch.     

Stability in reproductive timing and habitat usage of Chinook salmon across six years of varying environmental conditions and abundance

The spatial and temporal distribution of spawning activity by autumn‐run Chinook salmon Oncorhynchus tshawytscha (Walbaum) was examined across multiple years. The study period included two years of extreme drought conditions when water temperatures in the spawning reach of the Stanislaus River were considered sub‐optimal for spawning and egg incubation. Despite varying levels of superimposition, redd counts and densities remained stable and positively associated with river location, indicating that superimposition may be driven by habitat preference rather than the absence of suitable spawning locations. Spawning occurred slightly later during drought years (6–10 days later compared with wetter years). This delay was attributable to deferred migration instead of deferred spawning, and the majority of redds were constructed at water temperatures exceeding the optimal temperature range. As a consequence, estimates of juvenile production during 2014 and 2015 were among the lowest on record. These findings may be related in part to the high hatchery contribution to the population, above‐average temperatures during spawning and incubation, and superimposition rates. Management recommendations include adequate cold‐water storage in the upstream reservoir, refined spawning habitat restoration techniques in the light of superimposition rates and, on a broader system scale, actions that reduce the amount of stray hatchery Chinook salmon.     

Investigating factors contributing to reduced embryo survival in farm‐raised Atlantic salmon,Salmo salar L.

Embryo mortality of Atlantic salmon, Salmo salar, has been increasing for more than a decade in the State of Maine, a leading producer of this species in the United States. Increasing embryo mortality not only creates a financial bottleneck for farms but also prevents the sale of surplus eggs as an additional source of revenue. Blood and egg samples were collected at three Maine Atlantic salmon farms from female broodstock at the time of spawning over a 2‐year period. Correlative factors for reduced embryo survival were investigated by measuring egg and maternal plasma concentrations of 17β‐estradiol (E2), 11‐ketotestosterone (11‐KT), testosterone and calcium, as well as maternal hepatic ethoxyresorufin‐O‐deethylase (EROD) activity and fork length. Significant positive correlations were found between maternal plasma concentrations of E2 and 11‐KT and embryo survival. Interestingly, there was no correlation with egg concentrations of sex steroids and embryo survival, suggesting that embryo mortality does not likely rest with the maternal deposition of sex steroids into the egg, but with another hormone regulated process related to egg assembly, ovulation or post‐ovulatory ageing.     

Evolution of introduced Chinook salmon (Oncorhynchus tshawytscha) in Lake Huron: emergence of population genetic structure in less than 10 generations

Abstract – Population genetic structure was detected in Chinook salmon Oncorhynchus tshawytscha in their non‐native range of Lake Huron using microsatellite DNA. All Chinook salmon in this system descend from Green River, Washington cohorts, originally transplanted to Michigan hatcheries in the late 1960s. We tested for population genetic differentiation of age 0 fish collected from 13 rivers and two hatcheries in 2007. The amount of genetic differentiation among collection sites was low but statistically significant, with F_ST values ranging from 0.036 to 0.133 and R_ST values ranging from 0.008 to 0.157 for specific loci. Based on pairwise F_ST and R_ST values and Bayesian cluster analysis, the Maitland River population in the Main Basin of Lake Huron was genetically distinct from the remaining collection sites. Based on analysis of bycatch data from commercial gill net fisheries, Chinook salmon likely colonised the Main Basin by 1975 (10 generations ago) and the North Channel and southern Georgian Bay regions by 1980 (eight generations ago). Thus, population genetic structure has emerged in Lake Huron Chinook salmon in <10 generations.     

From Atlantic to Pacific: Price links in the US wild and farmed salmon market

Abstract

In 1990, the US International Trade Commission stated that Atlantic and Pacific salmon species did not share a substitute relationship in any of the product forms. This result is contrary to economic demand studies that show a substitute relationship for Atlantic and Pacific salmon species. Time‐series results reported in this paper are consistent with the earlier demand studies and show evidence of an equilibrium price system that includes Atlantic, chinook and coho salmon species for the US market. For these three salmon species a substitute relationship cannot be rejected. However, we observe only weak price links across the three different species in the different US regional markets.     

An ecological–economic model on the effects of interactions between escaped farmed and wild salmon (Salmo salar)

This study explores the ecological and economic impacts of interactions between escaped farmed and wild Atlantic salmon (Salmo salar, Salmonidae) over generations. An age‐ and stage‐structured bioeconomic model is developed. The biological part of the model includes age‐specific life‐history traits such as survival rates, fecundity and spawning successes for wild and escaped farmed salmon, as well as their hybrids, while the economic part takes account of use and non‐use values of fish stock. The model is simulated under three scenarios using data from the Atlantic salmon fishery and salmon farming in Norway. The social welfare is derived from harvest and wild salmon while the economic benefits of fishing comprise both sea and river fisheries. The results reveal that the wild salmon stock is gradually replaced by salmon with farmed origin, while the total social welfare and economic benefit decline, although not at the same rate as the wild salmon stock.     

Spatial distribution of ocean habitat of yearling Chinook (Oncorhynchus tshawytscha) and coho (Oncorhynchus kisutch) salmon off Washington and Oregon,USA

We determined the habitat usage and habitat connectivity of juvenile Chinook (Oncorhynchus tshawytscha) and coho (Oncorhynchus kisutch) salmon in continental shelf waters off Washington and Oregon, based on samples collected every June for 9 yr (1998–2006). Habitat usage and connectivity were evaluated using SeaWiFS satellite‐derived chlorophyll a data and water depth. Logistic regression models were developed for both species, and habitats were first classified using a threshold value estimated from a receiver operating characteristic curve. A Bernoulli random process using catch probabilities from observed data, i.e. the frequency of occurrence of a fish divided by the number of times a station was surveyed, was applied to reclassify stations. Zero‐catch probabilities of yearling Chinook and yearling coho salmon decreased with increases in chlorophyll a concentration, and with decreases in water depth. From 1998 to 2006, ～ 47% of stations surveyed were classified as unfavorable habitat for yearling Chinook salmon and ～ 53% for yearling coho salmon. Potentially favorable habitat varied among years and ranged from 9 856 to 15 120 km² (Chinook) and from 14 800 to 16 736 km² (coho). For both species, the smallest habitat area occurred in 1998, an El Niño year. Favorable habitats for yearling Chinook salmon were more isolated in 1998 and 2005 than in other years. Both species had larger and more continuous favorable habitat areas along the Washington coast than along the Oregon coast. The favorable habitats were also larger and more continuous nearshore than offshore for both species. Further investigations on large‐scale transport, mesoscale physical features, and prey and predator availability in the study area are necessary to explain the spatial arrangement of juvenile salmon habitats in continental shelf waters.     

Modelling and management options for salmonid sport fisheries: A case study from Patagonia,Argentina

Salmonid sport fishery management in Argentinian Patagonia is usually guided by stakeholder perceptions, which do not consider the biological and ecological constraints acting upon aquatic resources. An example of this are management policies for Traful Lake, where Atlantic salmon, Salmo salar L., was actively stocked during the last decade in an attempt to change the fish assemblage structure and to create a highly valuable sport fishery. This study assesses the likelihood of these policies achieving such assemblage structure changes through the study of affluent‐stream suitability as spawning and breeding grounds, lake fish assemblage parameters, trophic diversity and possible competition due to diet overlap. This study also assesses alternative management practices through population simulations and bioenergetic modelling under diverse catch‐size limit scenarios. This study concludes that it is not advisable to try to generate a unique and distinctive sport fishery by stocking Atlantic salmon in an already renowned fishery in Northern Patagonia. Instead, a more comprehensive framework for decision‐making is suggested, involving short‐term studies that go beyond the specific problem of the target species and incorporate the whole fish assemblage using diverse approaches and modelling strategies.     

Offspring investment in wild Atlantic salmon (Salmo salar): relationships with smolt age and spawning condition

We investigated the independent effects of age at smolting and body condition at the time of spawning on egg production by female Atlantic salmon (Salmo salar). For a given body size, female salmon that had smolted as juveniles after 2 years in fresh water produced smaller, more numerous eggs than females that smolted 1 year later. Furthermore, fecundity (but not egg size) was related positively to maternal body condition at spawning. Given that age at smolting is closely related to juvenile growth rate; results from this study suggest that conditions experienced by female Atlantic salmon during both early life and adulthood have implications for the size and number of eggs that they produce.     

Use of an acoustic telemetry array for fine scale fish behaviour assessment of captive Paiche,Arapaima gigas,breeders

As Arapaima gigas is one of the most valuable species for the growing production of Amazonian aquaculture, knowledge of its reproductive behaviour and its application to increase reproduction success in captivity is of great importance as no hormonal spawning induction technique exists for this species. An acoustic positioning system (LOTEK Inc.) was used to observe the interactions of adult fish to better understand the formation of mating pairs. Fish were placed in a 4,500 m² aquaculture pond over a 6‐month period in the IIAP field station of Pucallpa, Perú. This paper describes the methodological protocols used to set up and test the hydrophone array and presents the methodology used for the analysis of the huge amount of collected data. This methodology is illustrated by the analysis of a 6‐day period for a mating pair that showed a spawning event. The results indicated that male and female occupied mostly one preferential area in one pond edge where the nesting area is located. Different activity patterns were observed during the spawning event, with male and female being closer during the spawning day. The results also showed that male travelled less distance than female during the studied period. Finally these results demonstrated the suitability of such equipment to monitor fish interactions at fine spatial (sub meter) and temporal (5 s) scales in confined environments like aquaculture ponds.