The cost of participatory barley breeding

Farmer participation in agricultural research is increasingly seen as a powerful methodology to increase the relevance of technologies developed to benefit farmers' communities. In plant breeding, farmer participation is considered as a way to increase the probability of adoption of new varieties. However, the higher expected cost of participatory plant breeding (PPB) is seen as one of the main obstacles to its wider adoption.This paper addresses the issue of the different costs to an Institution of running a PPB program or a non-participatory program and uses the barley-breeding program at the International Center for Agricultural Research in the Dry Areas (ICARDA) as a case study.Observations and data collection were carried out during one full cropping season on the cost of the three main components of the breeding program, i.e. the management of the field trials (land and seedbed preparation, planting, fertilizer application, weed control, harvesting, and seed threshing, cleaning, treating and packaging), the travel to farmers' fields or to the research sites, and the human resources (scientists, technical staff, local workers and farmers) involved in breeding activities.We compared two options for the centralized–non-participatory breeding program, differing in the number of sites (8 and 16) used for the on-farm trials, with 160 options for the decentralized-participatory breeding program, differing in the combination of number of sites (from 4 to 16) and number of trials per site (from 1 to 10).The results show that in both decentralized-participatory and centralized–non-participatory plant breeding the cost of managing the field trials is the highest followed by the cost of human resources and that of travel: the contribution of each component to the total cost varies with the various options and the various combinations of the number of sites and of farmers.The comparison of the aggregated costs indicates that in the case of the ICARDA' barley-breeding program there are no relevant differences between the participatory and the non-participatory plant breeding programs. This is largely associated with the fact that the decentralized-participatory breeding program reaches the same level of development of the breeding material 3 years earlier than the centralized–non-participatory breeding program. Depending on the type of centralized-breeding program and on the combination of number of sites and number of farmers per site in the participatory program, the aggregated costs of the participatory program are lower than those of the centralized-breeding program by between 5 and 28%. At the same level of cost of the centralized program, the model of participatory program used in this study generates more information due to the use of more trials at each site. This improves selection efficiency and provides an analytical tool to optimize the number of sites and of farmers per site.     

Collaborative and consultative participatory plant breeding of rice for the rainfed uplands of eastern India

We describe a participatory plant breeding (PPB) programme in rice for the rainfed uplands of eastern India. Collaborative participation (farmers grew and selected in segregating materials in their fields) and consultative participation (farmers selected among progenies in researchers' plots) were used. The PPB was started with only two crosses and, of these, Kalinga III/IR64 was the most successful and produced two released varieties: Ashoka 200F from collaborative breeding and Ashoka 228 from consultative breeding. Both yielded significantly more than control varieties, including Kalinga III, in research trials and in participatory trials in farmers' fields. Qualitative data from participatory trials was highly informative, statistically analysable, and cheaper to obtain than quantitative data. In low-yielding research-station and on-farm trials the two new upland varieties showed no significant genotype × environment interaction with the check varieties. However, in higher-yielding All India Coordinated Rice Improvement Project trials, both varieties were more adapted to low yielding environments than the national check variety. Farmers liked the varieties for their early maturity, improved lodging resistance, higher fodder and grain yield, long-slender grains and excellent cooking quality. Before certified seed production, farmer groups have produced large quantities of seed that have spread widely through informal channels. The returns from PPB, compared to conventional breeding, were higher because it cost less, the genetic gains per year were higher, and the benefits to farmers were realised earlier. This revised version was published online in August 2006 with corrections to the Cover Date.     

Farmers’ participation and breeding for durable disease resistance in the Andean region

In the Andean region, the Preduza project and its partners combined breeding for durable disease resistance using locally adapted cultivars and farmer participatory methods. The approach taken resembles participatory variety selection (PVS). Farmers participated in the selection of advanced materials, rather than finished cultivars. This paper describes this approach and reports experiences with farmers–breeders collaboration. As breeders involved farmers as participants, they learned more about the most important criteria of male and female farmers for preferred cultivars in the marginal environments of Andean cropping systems. This approach encouraged the use of locally adapted cultivars (often landraces), made the breeders less dependent on foreign materials, and has resulted in selection and development of new wheat, barley, common bean, quinoa, potato and maize cultivars. Breeding programmes based on crossing locally adapted cultivars followed by selection by the breeders in the early phases of the breeding programmes and by participatory selection with the farmers in the more advanced stages of the breeding programmes appeared successful. It became clear that breeders must be well acquainted with the farmer preferences such as the requirements for specific agronomic, storage, processing and marketing traits. Over a period of five years the centralized formal breeding approach predominantly based on material produced by the international institutes was replaced by decentralized breeding approaches based largely on local germplasm with extensive farmer participation.     

Molecular marker variability for southern root-knot nematode resistance in sweetpotato

Summary As organic farming refrains from high and chemical inputs it needs varieties better adapted to organic conditions to improve the yield stability and quality of crops. In order to make genebank accessions more accessible for the utilisation in organic breeding programmes, a participatory research project with farmers was carried out in 2002 and 2003. From the Dutch genebank collection 37 onion accessions, divided into five different groups (according to their market use), were selected and planted at a commercial organic farm. Farmer participation in characterisation and evaluation of the material resulted in including additional plant traits for genebank characterisation as well as new selection criteria for breeding. It also provided researchers insight into how organic farmers evaluate and value certain plant traits. Variation for important properties was found within and between the five groups. To establish base populations, the farmers, in collaboration with the researchers, selected the best genotypes within the five groups of onion accessions. The new base populations may be exploited in order to achieve better-adapted material for organic farming systems.     

Participatory plant breeding in maize: A case study from Gujarat, India

This paper describes how plant breeders and farmers worked together to produce improved varieties of maize for the low-resource farmers of the Panchmahals district of Gujarat, India. Initially, farmers tested a range of maize varieties in a participatory varietal selection (PVS) programme. However, none of these proved to be very popular with farmers, although farmers who had more fertile fields adopted the variety Shweta from Uttar Pradesh. Hence, in 1994 a participatory plant breeding (PPB)programme was begun to generate new, more appropriate varieties. Yellow- and white-endospermed maize varieties were crossed that had been either adopted to some extent following PVS or had attributes, such as very early maturity,that farmers had said were desirable. In subsequent generations, the population was improved by mass selection for traits identified by farmers. In some generations,farmers did this in populations which were grown by breeders on land rented from a farmer. Soil fertility management was lower than that normally used on the research-station. The breeding programme produced several varieties that have performed well in research-station and on-farm trials. One of them, GDRM-187, has been officially released as GM-6 for cultivation in hill areas of Gujarat state,India. It yielded 18% more than the local control in research-station trials, while being seven days earlier to silk. In farmers' fields, where average yields were lower, the yield advantage was 28% and farmers perceived GDRM-187 to have better grain quality than local landraces. PPB produced a variety that was earlier to mature than any of those produced by conventional maize breeding, and took fewer years to do so. The returns from PPB,compared to conventional breeding, are higher because it is cheaper and benefits to farmers are realised earlier. This revised version was published online in August 2006 with corrections to the Cover Date.     

Participatory crop improvement and formal release of <Emphasis Type="Italic">Jethobudho</Emphasis> rice landrace in Nepal

Jethobudho is an aromatic rice landrace of the Pokhara valley in middle hills of Nepal. Although local consumers are willing to pay a high price for its purchase, the landrace has a problem with quality variation. Decentralized participatory population improvement for specific market-identified traits was conducted on “Jethobudho” populations collected from farmers’ fields in seven geographic regions of the valley in Nepal. The preferred post harvest quality traits, field tolerance to blast and lodging, and superior post harvest quality traits of Jethobudho were established by a consumer market survey. These traits were used for screening the materials. 338 sub-populations of Jethobudho were evaluated for yield, disease, lodging resistance, and post harvest quality traits. Significant variation was found for culm strength, neck blast tolerance, awn characteristics, panicle length, number of grains per panicle, test grain weight and post harvest quality traits, whereas no significant variation was found in grain yield, plant height, tiller number, maturity period and leaf blast. Based on these identified traits and micro-milling evaluations, 183 populations were screened in on-farm and on-station nurseries, and in succeeding years populations were further screened by plant breeders and expert farmers in research trials, resulting in the selection of 46 populations for post harvest quality traits. Six accessions with similar agronomic traits, field tolerance to blast and lodging, and superior post harvest quality traits, were bulked and evaluated on-farm using participatory variety selection (PVS). The enhanced Jethobudho accessions were also evaluated for aroma using simple sequence repeat (SSR) and found to have unique aromatic genetic constitution. Community based seed production groups were formed, linked to the Nepal District Self Seed Sufficiency Programme (DISSPRO), and trained to produce basic seeds (truthfully labeled) of Jethobudho. The National Seed Board of Nepal released the enhanced landrace in the name of “Pokhareli Jethobudho” in 2006, as the first bulk variety of traditional high quality aromatic rice improved through participatory plant breeding to be formally released in Nepal for general cultivation under the national seed certification scheme. Landrace improvement is shown as an important option for supporting programmes for in situ conservation of landraces on-farm.     

Comparing farmers and breeders rankings in varietal selection for low-input environments: A case study of rainfed rice in eastern India

A number of breeding institutions developed a project to assess importance of participatory plant breeding approaches for rainfed rice improvement in eastern India. The results of the first two years of participatory varietal selection are reported here. The objective was to evaluate the respective effects of participation of farmers in varietal evaluation and decentralization of varietal testing from breeding stations to farmers' fields on varietal ranking. Fields representing various hydrological situations were chosen in two to three villages at four rainfed lowland sites and one upland site. Sets of 15 to 25 varieties were tested both in farmers' fields and on-station in 1997 and 1998 and ranked by both farmers and breeders. The effect of participation was judged by comparing the rankings attributed by farmers and breeders to a given set of material in a given trial. The effect of decentralization was determined through comparisons between individual breeders' rankings across trials. Farmers' rankings were not randomly allocated, but agreement within the farmers' group was not always very strong. Except at one site, concordance among breeders' ranking was high, but, because of the limited number of breeders involved, it was seldom significant. In about two-thirds of the trials, there was a good agreement between farmers' and breeders' mean rankings. The consensus was particularly strong when severe constraints induced contrasting behavior in the genotypes. The decentralization effect appeared to be moderate, but variations due to a breeder effect were recorded. The part of genotype by environment interactions for grain yield due to location within one site and year was evaluated through various methods, showing more effect of G × E interactions at some sites than at others. Crossover interactions inducing changes in ranks represented a limited part of the yearly G × E interactions at all sites. Both farmer participation and decentralization of varietal testing in farmers' field would help in best matching the varieties to the needs, although their combined contribution would be more useful in some sites than in others. This revised version was published online in August 2006 with corrections to the Cover Date.     

Aspects of participatory plant breeding for quinoa in␣marginal areas of Ecuador

Summary Field trials were carried out in Ecuador with two indigenous communities, Ninín Cachipata and La Esperanza, to determine farmers’ preferences for quinoa (Chenopodium quinoa Willd.) cultivars and to improve PPB processes. More women than men participated, reflecting that quinoa, a primarily subsistence crop, is mainly managed by women. Farmers’ field selection criteria for quinoa in the field were mostly based on yield, earliness and plant colour; however only breeders’ measurements of yield and panicle height significantly correlated to farmer selection scores. Older women gave higher scores than younger women or men, apparently due to a concept of no cultivar being without value. Working in same gender pairs improved evaluation richness. INIAP technicians were more discriminating in their evaluations than farmers. They also used additional selection criteria of disease resistance and uniformity. At seed selection, farmers from Ninín Cachipata, where food security is not assured, chose lines based on yield, while farmers from La Esperanza, where resources are less limiting, also considered seed size, colour, saponin content and marketability. Field characteristics were not taken into consideration at seed selection, signifying that farmers are less interested in those characteristics, or that it was difficult for them to correlate field data when presented in tabular form with seed characteristics. Future trials with small farmers should have fewer lines or replications to avoid farmer fatigue during evaluation. Farmers who grow primarily for subsistence in semi-arid environments have more interest in growing quinoa, and more to gain from having improved cultivars; therefore future participatory efforts should focus on them.     

Decentralized-participatory plant breeding: an example of demand driven research

It is widely recognized that conventional plant breeding has been more beneficial to farmers in high-potential environments or those who can profitably modify their environment to suit new cultivars, than to the poorest farmers who cannot afford to modify their environment through the application of additional inputs and cannot risk the replacement of their traditional, well known and reliable varieties. As a consequence, low yields, crop failures, malnutrition, famine, and eventually poverty still affect a large proportion of humanity. Participatory plant breeding (PPB) is seen by several scientists as a way to overcome the limitations of conventional breeding by offering farmers the possibility to choose, in their own environment, which varieties suit better their needs and conditions. PPB exploits the potential gains of breeding for specific adaptation through decentralized selection, defined as selection in the target environment, and is the ultimate conceptual consequence of a positive interpretation of genotype × environment interactions. The paper describes a model of PPB developed by The International Center for Agricultural Research in the Dry Areas and used successfully in several countries in West Asia and North Africa. Genetic variability is generated by breeders, selection is conducted jointly by breeders, farmers, and extension specialists in a number of target environments, and the best selections are used in further cycles of recombination and selection. Technically, the process is similar to conventional breeding, with three main differences. Testing and selection take place on-farm rather than on-station, key decisions are taken jointly by farmers and the breeder, and the process can be independently implemented at a large number of locations. The model also incorporates seed production. Farmers handle the initial phases, multiplying promising breeding material in village-based seed production systems. The PPB model is flexible; it can generate populations, pure lines, and eventually mixtures of pure lines in self-pollinated crops; as well as hybrids, populations, and synthetics in cross-pollinated crops. PPB has several advantages. New varieties reach the release phase much faster than in conventional breeding, and are better suited to farmers’ needs and willingness to invest in inputs and management. Release and seed multiplication activities concentrate on varieties known to be farmer-acceptable. These advantages are particularly relevant to developing countries where large investments in plant breeding have not yielded returns, and many “improved” varieties developed through conventional breeding are not adopted by farmers. PPB also ensures that biodiversity is maintained or increased because different varieties are selected at different locations. In addition to the economical benefits, participatory research has a number of psychological, moral, and ethical benefits, which are the consequence of a progressive empowerment of the farmers’ communities; these benefits affect sectors of their life beyond the agricultural aspects. In conclusion, PPB, as a case of demand driven research, gives voice to farmers, including those who have been traditionally the most marginalized such as the women, and elevates local knowledge to the role of science.     

Participatory plant breeding with maize in Mexico and Honduras

Maize is a staple food crop in many developing countries. However, if seven major maize producing countries are excluded from this group, data indicate that only 34% of the maize area is planted with improved seed despite considerable effort invested in maize breeding. This has led researchers to investigate other options, such as farmer-participatory plant breeding, for delivering the benefits of plant breeding knowledge and technology to farmers in developing countries. This paper describes short-term results from participatory maize breeding studies in Mexico and Honduras. Results from three selection cycles in Mexico suggest that stratified mass selection without pollination control, with selections carried out by researchers in farmers' fields, may be effective at improving yield in farmers' local varieties. In Honduras, mass selection with pollination control, where selections were done by collaborating farmers in their own fields on their own varieties, showed trends (non-significant) towards yield improvement. Farmer selection seemed to offer the greatest yield benefit over experiment station selection on the farm with the lowest yield potential, suggesting that farmer-participatory approaches may be most advantageous in marginal environments where experiment station conditions differ most dramatically from farmers' conditions. These studies highlighted the importance of seed systems knowledge in designing participatory plant breeding programs. For cross-pollinated crops, they also highlighted the need to balance progress from selection and demands on farmers' time and labor in choosing breeding methods. Further work is needed to investigate farmer-participatory breeding approaches that can address post-harvest traits. This revised version was published online in August 2006 with corrections to the Cover Date.     

Effects of farmers' seed management on performance and adaptation of pearl millet in Rajasthan, India

Pearl millet (Pennisetum glaucum [L.]R.Br.) is the staple food and fodder crop of farmers in the semi-arid areas of north-west India. The majority of farmer sin western Rajasthan depend on their own seed production and employ different seed production strategies that involve different levels of modern-variety introgression into landraces as well as different selection methods. This study quantifies the effects of three seed management strategies on environmental adaptation and trait performance. Forty-eight entries representing farmers’ grain stocks — pure landraces or landraces with introgressed germ plasm from modern varieties — as well as 33 modern varieties, multiplied by breeders or farmers, were evaluated in field trials at three different locations over two years under varying drought-stress conditions. Results indicate that the plant characteristics employed by farmers in describing adaptive value and productivity is an effective approach in discriminating the type of millet adapted to stress and non-stress conditions. It was also found that introgression of modern varieties(MVs) leads to populations with a broader adaptation ability in comparison to pure landraces or MVs alone – but only if MV introgression is practised regularly and is combined with mass panicle selection. Under high-rainfall conditions, farmer grain stocks with MV introgression show similar productivity levels as modern varieties. Under lessening rainfall, pure landraces show, in tendency, higher grain yields. In conclusion, farmers’ seed management could form an integral part of participatory breeding programs. This revised version was published online in July 2006 with corrections to the Cover Date.     

Fast track participatory approach to release of elite cassava genotypes for various uses in Nigeria’s cassava economy

The aim of the Integrated Cassava Project (ICP) of the International Institute of Tropical Agriculture was to pre-emptively manage the cassava mosaic disease (CMD) to avert an imminent and increasing possible threat of the Ugandan strain of the CMD virus of the pathogen from doing damage to the Nigerian cassava economy. The strategy was to engage in activities that would lead to cultivar-substitution by replacing the susceptible varieties on farmers’ fields with superior genotypes that are not only CMD resistant or tolerant but also high yielding with good dry matter content. A fast track participatory selection approach was used in 2 years to release nine new lines in Nigeria. It was intensive and several lessons were learnt. The varieties released after 2 years were TMS 98/0510, TMS 98/0581, TMS 97/2205, TMS 98/0505, TME 419, TMS 92/0326, TMS 96/1632, TMS 98/0002, and TMS 92/0057.     

Genotypic and phenotypic evaluation of wild cotton accessions previously identified as resistant to root-knot (Meloidogyne incognita) or reniform nematode (Rotylenchulus reniformis)

Although the effect of local adaptation is well documented in evolutionary biology, few studies have quantified the impact of local adaptation in plant breeding. Decentralized plant breeding programs have the potential to harness local adaptation for crop improvement, but the effectiveness of such models is understudied. We quantified the ability of a decentralized participatory plant breeding program to improve Weed-competitive ability (WCA) in organic spring wheat. After four farmers in the northeast United States selected wheat populations for WCA and its correlated trait of early vigor, we tracked gains in selection and local adaptation. On average, farmers enhanced competitive ability of selected genotypes by 11.46%. Measured gains from selection for early vigor and early canopy cover, however, varied among testing environments. Gains in selection were highly related to the genetic correlation coefficient between selection and testing environment (r?=?0.77 and r?=?0.80 for early vigor and canopy cover, respectively). To accurately measure gains from selection for decentralized breeding programs, testing environments should be chosen that are similar to where selection took place. Inconsistent weed competition among site-years limited conclusions from the analysis of local adaptation for weed competitive ability. Detecting local adaptation in plant breeding, which typically uses a small number of selection cycles compared to evolutionary biology, likely requires many genotypes, environments, and years for adequate statistical power. The ecological complexity of weed competitive ability further complicates experimental design and challenges the ability to measure local adaption.

     

Consequences of a decentralized participatory barley breeding programme on changes in SSR allele frequency and diversity in one cycle of selection

Changes in allele type, allele frequency and genetic diversity because of selection by individual farmers and breeders were assessed using simple sequence repeats (SSRs) during one cycle of selection in a decentralized participatory barley breeding programme. Selection by both breeders and farmers resulted in the loss of a number of alleles in the majority of the locations, with more alleles lost in the heterogeneous breeding materials than in the fixed genotypes, indicating selection against undesirable traits uncovered in the heterogeneous breeding materials that are presumably linked to SSR alleles. After selection, significant allelic frequency changes were observed at several loci in both the germplasm groups. As the selection was conducted independently in each location, an allele had a chance of being selected in more than one location, and therefore considering the whole study area the allelic composition and diversity of the original genetic materials was maintained after the selection. The study showed the importance of decentralized participatory plant breeding in maintaining genetic diversity that helps stabilize and sustain production in unpredictable production conditions.     

Decentralized selection and participatory approaches in plant breeding for low-input systems

Heterogeneous environments make it difficult to apply consistent selection pressure because often it is difficult to identify a single or a few superior genotypes across all sets of conditions. However, when the target system is characterized by heterogeneity of environmental stress, varieties developed in high-yielding conditions may fail to satisfy farmers’ needs. Although this type of system is often found in marginal environments of developing countries, heterogeneous environmental conditions are also a feature of organic and low-external-input systems in developed countries. To meet the needs of these systems, breeding programs must decentralize selection, and although decentralized selection can be done in formal breeding programs, it is more efficient to involve farmers in the selection and testing of early generation materials. Breeding within these target systems is challenging, both genetically and logistically, but can identify varieties that are adapted to farming systems in marginal environments or that use very few external inputs. A great deal has been published in recent years on the need for local adaptation and participatory plant breeding; this article reviews and synthesizes that literature.     

Replicate allocation to improve selection efficiency in the early stages of a potato breeding scheme

Field data and simulation were used to investigate replication within trials and the allocation of replicates across trial sites using partial replication as an approach to improve the efficiency of early-stage selection in a potato breeding programme. Analysis of potato trial data using linear mixed models, based on four-plant (clonal) plots planted as augmented partially-replicated (p-rep) designs, obtained genetic and environmental components of variation for a number of yield and tuber components. Heritabilities, trial-to-trial genetic correlations and performance repeatability of clonal selections in p-rep trials and in subsequent fully replicated trial stages were high, and selection was effective for the economically important traits of marketable tuber yield and tuber cooking quality. Simulations using a parameter-based approach, pertaining to the variance components estimated from the p-rep field trials, and the parametric bootstrapping of historic empirical data showed improved rates of genetic gain with p-rep testing over one and two locations compared with testing in fully replicated trials. This potato breeding study suggests that the evaluation and selection of a clonal field crop in fully replicated trials may not be optimal in the early stages of a breeding cycle and that p-rep designs offer a more efficient and practical alternative.     

Development of locally-adapted faba bean cultivars for organic conditions in Germany through a participatory breeding approach

Organic farming requires cultivars that are specifically adapted to this low input cropping system. Hence, organic farmers and scientists joined in a participatory breeding approach to develop region-specific genotypes of spring faba bean for organic conditions in Germany. A set of 49 genotypes with contrasting degrees of heterozygosity and heterogeneity was used in field trials across five locations in Germany during 3 years 2004, 2005 and 2006. The material involved 18 inbred lines, their 18 polycross progenies, one blend of inbred lines, one blend of polycross progenies, one blend of hybrids and ten checks. Inbred lines are uniform, thus giving the option to be specifically adapted; whereas the polycross progenies and synthetics (Syn-1; predicted from the inbred lines and polycross progenies performance) are partly heterogeneous and heterozygous, thus giving the option to evolve. Agronomic performance was assessed and a “personal appreciation” score of the material was assigned to each genotype by each partner. This personal appreciation was strongly influenced by biotic and abiotic constraints faced by the crop in each location and by the expected grain yield of the genotypes. Uniformity was apparently appreciated by organic farmers. In all locations, the highest yielding inbred line yielded slightly better than the predicted highest yielding synthetic. However, this slight disadvantage of the synthetic is very likely to disappear if the synthetic (Syn-1) is propagated during successive generations.     

木薯种质资源遗传多态性SSR分子标记的研究

为了研究广西壮族自治区亚热带作物研究所从泰国、菲律宾、缅甸、印度尼西亚等国引进的25份木薯种质资源及海南省和广西壮族自治区亚热带作物研究所等选育的65份木薯品种(系)的遗传多样性,应用12对SSR引物对80个木薯种质进行PCR扩增,获得119个扩增带形,扩增产物的片段大小范围在100~300 bp之间,每对引物检测等位基因4~16个,平均为10个。根据品系间的遗传相似系数,利用UPGMA法进行聚类分析,以遗传相似系数0.46为阈值,将80个木薯品系分为两类。聚类分析结果表明,引进的国外资源和所选育的种质资源丰富了中国木薯种质库,拓宽了中国木薯遗传育种的物质基础,为进一步进行木薯新品种的选育和种质资源的收集及管理提供了遗传依据。