Isolation and characterisation of fusaricidin-type compound-producing strain of Paenibacillus polymyxa SQR-21 active against Fusarium oxysporum f.sp. nevium

A bacterial strain was isolated from the rhizosphere of healthy watermelon plants in a heavily wilt-diseased field. This isolate was tentatively identified as Paenibacillus polymyxa (SQR-21) based on biochemical tests and partial 16S rRNA sequence similarity. The purified antifungal compounds were members of the fusaricidin group of cyclic depsipeptides having molecular masses of 883, 897, 947, and 961 Da with an unusual 15-guanidino-3-hydroxypentadecanoic acid moiety, bound to a free amino group. The strain SQR-21 was not able to produce antifungal volatile compounds but was able to produce cellulase, mannase, pectinase, protease, β-1,3-glucanase and lipase enzymes. However, the strain did not show any chitinase activity. Biocontrol potential of this strain was evaluated against Fusarium oxysporum cause of Fusarium wilt disease of watermelon in a greenhouse experiment. This strain combined with organic fertiliser decreased the disease incidence by 70% and increased the dry plant weight by 113% over the control.