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实时荧光定量PCR筛选稻曲病菌内参基因
引用本文:顾志敏,丁正中,陈析丰,郭龙彪,曾大力,钱前,马伯军.实时荧光定量PCR筛选稻曲病菌内参基因[J].中国水稻科学,2012,26(5):615-618.
作者姓名:顾志敏  丁正中  陈析丰  郭龙彪  曾大力  钱前  马伯军
作者单位:1. 浙江师范大学化学与生命科学学院,浙江金华321004;中国水稻研究所水稻生物学国家重点实验室,浙江杭州310006
2. 浙江师范大学化学与生命科学学院,浙江金华,321004
3. 中国水稻研究所水稻生物学国家重点实验室,浙江杭州,310006
基金项目:国家自然科学基金资助项目(31171519,31101130);浙江省自然科学基金资助项目(LY12CD6001)
摘    要: 通过实时定量PCR分析了稻曲病菌中5个传统内参基因18S rRNA、GAPDH、ubiquitin、β actin、α tubulin的mRNA差异表达情况,并利用geNorm软件分析了它们在4个发育时期和NaCl胁迫处理中的表达稳定性。结果表明,在菌龄为7 d、8 d、9 d、10 d的稻曲病菌中,α tubulin 2和β actin表达稳定;在0.4 mol/L  NaCl溶液处理0 h、4 h、8 h、12 h、16 h后,β actin和α tubulin 2表达稳定。因此,当利用荧光定量PCR分析比较稻曲病菌基因表达差异时,可选择α tubulin和β actin作为内参基因。

关 键 词:稻曲病菌  实时定量PCR  内参基因  geNorm软件
收稿时间:2012-01-16;

Reference Gene Selection of Ustilaginoidea virens by Real-time PCR
GU Zhi-min , DING Zheng-zhong , CHEN Xi-feng , GUO Long-biao , ZENG Da-li , QIAN Qian , MA Bo-jun.Reference Gene Selection of Ustilaginoidea virens by Real-time PCR[J].Chinese Journal of Rice Science,2012,26(5):615-618.
Authors:GU Zhi-min  DING Zheng-zhong  CHEN Xi-feng  GUO Long-biao  ZENG Da-li  QIAN Qian  MA Bo-jun
Institution:1,(1 College of Chemistry and Life Science,Zhejiang Normal University,Jinhua 321004,China;2 State Key Laboratory of Rice Biology,China National Rice Research Institute,Hangzhou 310006,China;)
Abstract:A total of five traditional reference genes of Ustilaginoidea virens were systematically compared by using real-time quantitative PCR,including 18S rRNA,GAPDH,ubiquitin,β-actin and α-tubulin.The expression stability of the 5 candidate reference genes was evaluated with geNorm program when the fungus was 7,8,9 and 10 days old or exposed to 0.4 mol/L NaCl for 0 h,4 h,8 h,12 h,16 h.The results showed that α-tubulin-2 and β-actin were stably expressed when the fungus was at different days of age.For the case of 0.4 mol/L NaCl stress,β-actin and α-tubulin-2 were also expressed stably.As a conclusion,β-actin and α-tubulin could be used as the reference genes for normalization of real-time quantitative PCR data.
Keywords:Ustilaginoidea virens  real-time quantitative PCR  reference gene  geNorm program
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