首页 | 本学科首页   官方微博 | 高级检索  
     检索      

光皮桦SSR分子标记体系的建立
引用本文:尤卫艳,黄华宏,程龙军,童再康,朱玉球.光皮桦SSR分子标记体系的建立[J].浙江林学院学报,2010,27(3):464-469.
作者姓名:尤卫艳  黄华宏  程龙军  童再康  朱玉球
作者单位:浙江林学院,林业与生物技术学院,浙江,临安,311300
基金项目:浙江省重大科技专项项目 
摘    要:采用十六烷基三甲基溴化铵(CTAB)-硅珠法提取光皮桦Betula luminifera嫩叶DNA,利用近缘种日本白桦B. platyphylla var. japonica和欧洲白桦B. pendula的引物,建立光皮桦简单重复序列标记(SSR)反应体系。在体系建立过程中,采用单因素法分别对影响聚合酶链式反应(PCR)反应的因素进行分析。结果表明:在20 μL反应体系中,模板DNA用量、Mg2+浓度、脱氧核糖核苷酸(dNTPs)浓度、引物浓度、Taq DNA聚合酶用量分别为60 ng,1.500 mmol·L-1,0.175 mmol·L-1,2.500 mmol·L-1,1.0 × 16.67 nkat时结果最好;引物退火温度比日本白桦扩增时提高1 ℃时效果佳。PCR扩增产物经聚丙烯酰胺凝胶电泳后随机挑取其中3对引物扩增的多态性片段进行克隆测序,对引物的通用性做进一步检验,序列经比对后得到的与原物种序列相似度(max ident值)均在95.0%以上。可见,近缘种日本白桦和欧洲白桦的SSR引物可以在光皮桦上应用。图7表2参17

关 键 词:林木育种学  光皮桦  简单重复序列(SSR)分子标记

An SSR molecular labeling technique system for Betula luminifera
YOU Wei-yan,HUANG Hua-hong,CHENG Long-jun,TONG Zai-kang,ZHU Yu-qiu.An SSR molecular labeling technique system for Betula luminifera[J].Journal of Zhejiang Forestry College,2010,27(3):464-469.
Authors:YOU Wei-yan  HUANG Hua-hong  CHENG Long-jun  TONG Zai-kang  ZHU Yu-qiu
Institution:(School of Forestry and Biotechnology,Zhejiang Forestry College,Lin'an 311300,Zhejiang,China)
Abstract:To find the optimal simple sequence repeats(SSR) system for Betula luminifera,the cetyltrimethyl-ammonium bromide (CTAB) method was used to extract DNA from tender leaves,using the known primers from related species:B. platyphylla var. japonica and B. pendula. Then,one factor was changed at a time to optimize the polymerase chain reaction (PCR). Next,Polyacrylamide Gel Electrophoresis (PAGE) was used to detect the amplified products with three primers' segments randomly selected from thirty-six pairs of primers and sequenced to further check the universality of the primer. Results showed that in a volume of 20 μL,the optimal reaction system was 60 ng template DNA,1.500 mmol·L-1 Mg2+,0.175 mmol·L-1 deoxyri-bonucleotide triphosphate (dNTP)s,2.500 mmol·L-1 primer,and 1.0 × 16.67 nkat Taq polymerase. Compared with B. platyphylla var. japonica and B. pendula,the optimal annealing temperature of the primer was 1°C higher. The blast results from primer AF310851,AB084479,and AB084480 showed that the values of max ident were all above 95.0%. This indicated that the SSR primers of birch could be used with B. luminifera.
Keywords:forest tree breeding  Betula luminifera  simple sequence repeats (SSR) marker
本文献已被 维普 万方数据 等数据库收录!
点击此处可从《浙江林学院学报》浏览原始摘要信息
设为首页 | 免责声明 | 关于勤云 | 加入收藏

Copyright©北京勤云科技发展有限公司  京ICP备09084417号