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地衣芽孢杆菌16S-ITS标记及其特异性分析
引用本文:陈冲,佟建明,张潞生. 地衣芽孢杆菌16S-ITS标记及其特异性分析[J]. 农业科学与技术, 2011, 0(11): 1572-1573,1588
作者姓名:陈冲  佟建明  张潞生
作者单位:山西省农业科学院果树研究所;中国农业科学院北京畜牧兽医研究所;中国农业大学农学与生物技术学院
摘    要:[目的]建立地衣芽孢杆菌的分子鉴定方法。[方法]通过对地衣芽孢杆菌TS-01的16S和ITS序列进行克隆测序和差异性分析,以该区序列为靶序列设计地衣芽孢菌TS-01的特异性引物,并用该引物扩增全部受试菌种。[结果]从ITS和16Sr DNA区间设计了地衣芽孢杆菌种特异性引物,特异性引物PCR的最佳退火温度为67.2℃,循环数为24个;地衣芽孢杆菌TS-01可扩增出1条905bp的标记片段,其他受试菌株均为阴性,从而证明试验得到了在种水平上对该菌种进行准确鉴定的特异16S-ITS标记。[结论]地衣芽孢杆菌TS-01分子鉴定方法的建立,为地衣芽孢杆菌的分子诊断奠定了基础。

关 键 词:地衣芽孢杆菌  特异引物  16S  ITS

Analysis on 16S-ITS Marker from Bacillus licheniformis and Its Specificity
CHEN Chong,TONG Jian-ming,ZHANG Lu-sheng. Analysis on 16S-ITS Marker from Bacillus licheniformis and Its Specificity[J]. Agricultural Science & Technology, 2011, 0(11): 1572-1573,1588
Authors:CHEN Chong  TONG Jian-ming  ZHANG Lu-sheng
Affiliation:1. Pomology Institute, Shanxi Academy of Agricultural Sciences, Taigu 030815; 2. Institute of Animal Science, Chinese Academy of Agricultural Sciences, Beijing 100094; 3. College of Agriculture and Biotechnology, China Agricultural University, Beijing 100094
Abstract:[Objective] This study aimed to establish molecular identification methods for Bacillus licheniformis. [Method] Based on clone sequencing and difference analysis for 16S and ITS sequences of B. licheniformis TS-01, specific primers were designed using region sequences as the targets used for amplifying all test strains. [Result] The specific primers of B. licheniformis were designed from the ITS and 16S rDNA regions. The optimal annealing temperature of the specific primers for PCR was 67.2 ℃ with 24 cycles. A 905 bp marker fragment was amplified for B. licheniformis TS-01, while all other test strains showed negative results. This indicated that a specific 16S-ITS marker was obtained, which accurately identified the strain at the species level. [Conclusion] This molecular identification method for B. licheniformis TS-01 has laid the foundation for molecular diagnosis of B. licheniformis.
Keywords:Bacillus licheniformis  Specific primer  16S  ITS
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