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Several stably expressed QTL for spike density of common wheat (Triticum aestivum) in multiple environments
Authors:Hang Liu  Jian Ma  Yang Tu  Jing Zhu  Puyang Ding  Jiajun Liu  Ting Li  Yaya Zou  Ahsan Habib  Yang Mu  Huaping Tang  Qiantao Jiang  Yaxi Liu  Guoyue Chen  Youliang Zheng  Yuming Wei  Xiujin Lan
Institution:1. Triticeae Research Institute, Sichuan Agricultural University, Chengdu, Sichuan, China

State Key Laboratory of Crop Gene Exploration and Utilization in Southwest China, Chengdu, China;2. Triticeae Research Institute, Sichuan Agricultural University, Chengdu, Sichuan, China;3. Biotechnology and Genetic Engineering Discipline, Khulna University, Khulna, Bangladesh

Abstract:Spike density (SD), an important spike morphological trait associated with wheat yield, is the spikelet number per spike (SNS) divided by spike length (SL). In this study, phenotypic data from eight environments were collected and a recombinant inbred line population (RIL) constructed by the wheat line 20828 and the cultivar 'Chuannong16' and a Wheat55K SNP array-based constructed genetic linkage map were used to identify SD quantitative trait locus (QTL). Correlation between SD and other agronomic traits was calculated. Genes associated with plant growth and development for major loci were predicted. The results showed that 24 QTLs associated with SD were detected in eight environments. Among them, three major QTL, namely QSd.sicau-5B.2, QSd.sicau-2D.3 and QSd.sicau-4B.1, explained up to 35.62%, 14.21% and 11.23% of phenotypic variation, respectively. The positive alleles of them were all derived from 'Chuannong16'. The significant relationships between SD and other agronomic traits were detected and discussed. Taken together, the stably expressed SD QTL under different environments identified in this study provided theoretical guidance for further fine mapping and germplasm improvement.
Keywords:agronomic traits  correlation  QTL  spike density  wheat  wheat55K SNP
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