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结球甘蓝SSR检测体系的建立及优化
引用本文:司军,李成琼,宋洪元,任雪松,宋明,王小佳.结球甘蓝SSR检测体系的建立及优化[J].中国蔬菜,2009,1(12):19-23.
作者姓名:司军  李成琼  宋洪元  任雪松  宋明  王小佳
作者单位:西南大学园艺园林学院,重庆市蔬菜学重点实验室,重庆 400715
基金项目:国家科学支撑计划项目,重庆市科技攻关项目,公益性行业(农业)科研专项基金,西南大学博士科研启动基金 
摘    要:摘,要:以结球甘蓝自交系15R(南宝)和14S(北黑大平头)为试材,建立了甘蓝SSR-PCR反应体系,并从 PCR反应组成、扩增程序等环节对SSR-PCR反应体系进行了优化。即10.00 μL反应体系组成为:1× Buffer(含20.00 mmol·L-1 MgCl2)、50.00 μmol·L-1 dNTPs、0.40 U Taq DNA聚合酶、0.40 μmol·L-1 SSR引物、1.00 μL DNA(60.00 ng·μL-1),加ddH2O至终体积10.00 μL;对基本扩增程序作了改进,适 宜的扩增程序为:94 ℃预变性5 min后进行20个迫降循环,94 ℃变性45 s,60 ℃退火45 s,72 ℃延伸 1 min,每个循环降低0.5 ℃;再进行15个循环,94 ℃变性45 s,55 ℃退火45 s,72 ℃延伸1 min;72 ℃延伸10 min,16 ℃保存。对PCR产物的电泳检测采用聚丙烯酰胺凝胶电泳(银染法)。

关 键 词:甘蓝  SSR  检测体系  建立  优化  
收稿时间:2008-12-12;

Establishment and Optimization of SSR Detection System in Cabbage(Brassica oleracea var.capitata L.)
SI Jun,LI Cheng-qiong,SONG Hong-yuan,REN Xue-song,SONG Ming,WANG Xiao-jia.Establishment and Optimization of SSR Detection System in Cabbage(Brassica oleracea var.capitata L.)[J].China Vegetables,2009,1(12):19-23.
Authors:SI Jun  LI Cheng-qiong  SONG Hong-yuan  REN Xue-song  SONG Ming  WANG Xiao-jia
Institution:Chongqing Municipal Key Laboratory of Olericulture,College of Horticulture and Landscape Architecture,Southwest University,Chongqing 400715,China
Abstract:In this study,it established and optimized SSR detection system including reaction components,amplified program,by using cabbage inbred lines 15R(‘Nanbao’)and 14S(‘Beiheidapingtou’).A stable SSR-PCR system was followed:10.00 μL reaction solution contained 1×Buffer,50.00 μmol·L-1 dNTPs,0.40 U Taq enzymes,0.40 μmol·L-1 SSR primers pairs,1.00 μL DNA(60.00 ng·μL-1).PCR amplifying program was divided into two steps,after one denaturing step of 5 min at 94 ℃,DNA was denatured for 45 s at 94 ℃,the annealing temperature was 60 ℃ and dropped 0.5 ℃ for each cycle,until a final annealing temperature of 50 ℃ was reached.For the last 15 cycles of the amplification,an annealing temperature of 55 ℃ was employed.When all cycles were finished,amplification ended for 10 min at 72 ℃ .The polyacrylamide gel electrophoresis was used in the detection of PCR amplification.
Keywords:SSR
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