Alterations in inheritance pattern and level of cytosine DNA methylation,and their relationship with heterosis in rice |
| |
Authors: | K Sakthivel K Girishkumar G Ramkumar V V Shenoy S T Kajjidoni P M Salimath |
| |
Institution: | (1) Research and Training Center, Barwale Foundation, A.G. Heights, Road No.12, Banjara Hills, Hyderabad, 500 034, India;(2) Department of Genetics and Plant Breeding, University of Agricultural Sciences, Dharwad, 580005, India;(3) Present address: Directorate of Rice Research, Rajendranagar, Hyderabad, India;(4) Present address: Nunhems Seeds Pvt. Ltd., Bangalore, India |
| |
Abstract: | Novel hybrid-specific/heterotic gene expression patterns observed from expression studies suggest the need to characterize
the underlying regulatory mechanism(s) to reveal the biological basis of heterosis in crop plants. To gain an insight into
the molecular basis of heterosis in rice, we investigated the inheritance pattern and level of cytosine methylation, a major
epigenetic regulatory mechanism, in the leaf tissue of an elite Indian rice hybrid KRH2 and its parents at three stages (15 day-old,
35 day-old seedling and flag leaf) and their correlation with heterosis using methylation-sensitive amplification polymorphism
(MSAP) technique. In contrast to parents, the level of methylation was high during initial growth stages and reduced as the
hybrid grew. Even though, a majority of cytosine methylation profiles were transmitted to hybrid at all stages, a considerable
level (25.4%) of cytosine methylation pattern was observed to be novel in hybrid and some of these altered loci were identified
to code for known/hypothetical proteins. It was also observed that demethylation events occurred more predominantly during
early stages than hypermethylation while the frequency of demethylation events decreased in flag leaf with a remarkable increase
in hypermethylation in the hybrid. These bi-directional events in methylation in KRH2 were validated in six hybrids with different
levels of grain yield heterosis and the level of cytosine methylation in the hybrid was observed to be significantly correlated
with heterosis. |
| |
Keywords: | |
本文献已被 SpringerLink 等数据库收录! |
|