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应用RT-PCR和斑点杂交法检测新疆梨树上的苹果锈果类病毒
引用本文:赵英,牛建新.应用RT-PCR和斑点杂交法检测新疆梨树上的苹果锈果类病毒[J].果树学报,2007,24(6):761-764.
作者姓名:赵英  牛建新
作者单位:石河子大学农学院园艺系,新疆石河子,832003
基金项目:国家自然科学基金 , 国家科技攻关项目 , 兵团科委资助项目
摘    要:利用自行设计的方法分离提取总RNA,通过一对特异引物,分别扩增出不同梨树品种上苹果锈果类病毒的特异片段,通过对库尔勒香梨品种上获得的特异片段回收、克隆和测序。结果表明,该片段长250bp,与已发表的AF421195同源性为99%,在此基础上利用克隆的ASSVd质粒,通过RT-PCR合成了生物素标记的cDNA探针,利用该探针对梨样品进行了斑点杂交检测,取得了很好的检测效果。进一步证明该反应体系能很好地用于梨树苹果锈果类病毒的RT-PCR检测。

关 键 词:梨树  新疆  苹果锈果类病毒  RT-PCR  cDNA探针  测序
文章编号:1009-9980(2007)06-761-04
修稿时间:2007-06-08

Detection of apple scar skin viroid in pear cultivars by RT-PCR and spot hybridization in Xinjiang area
ZHAO Ying,NIU Jian-xin.Detection of apple scar skin viroid in pear cultivars by RT-PCR and spot hybridization in Xinjiang area[J].Journal of Fruit Science,2007,24(6):761-764.
Authors:ZHAO Ying  NIU Jian-xin
Institution:Department of Horticulture, College of Agriculture, Shihezi University, Shihezi, Xinjiang 832003 China
Abstract:Total RNA was isolated using the method designed by ourselves. Full-length fragments of Apple scar skin viroid (ASSVd) have been amplified by one specific pair of primer from different pear samples. The ASSVd -specific fragment isolated from Korla’s Xiangli pear cultivar has been recovered,cloned and sequenced,and the result showed its length was 250 bp representing the homology of 99% compared with AF421195 published on NCBI database. Then biotin-labelled cDNA probe was synthesized using cloned plasmids by RT-PCR. The probe has been used well for spot hybridization detection of ASSVd,which further proved RT-PCR can be successfully used for the detection of ASSVd in pear.
Keywords:Pear  Xinjiang area  ASSVd  RT-PCR  cDNA probe  Sequence
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