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A model-based approach to assist variety evaluation in sunflower crop
Affiliation:1. AGIR, Université de Toulouse, INRA, INPT, INP-EI PURPAN, Castanet-Tolosan, France;2. Terres Inovia, Centre de recherche INRA de Toulouse, AGIR, 31326 Castanet-Tolosan, France;1. Space Weather Monitoring Center (SWMC), Faculty of Science, Helwan University, Egypt;2. LPP/Polytechnique/UPMC, CNRS, 4 Avenue de Neptune, 94107 Saint-Maur des fossés, France;3. ICTP, Trieste, Italy;4. Lab-STICC UMR 6285 Mines-Télécom Télécom Bretagne, CS 83818, 29288 Brest, Cedex 3, France;1. Normandie Univ, France; ULH, LMAH, F-76600 Le Havre; FR CNRS 3335, ISCN, 25 rue Philippe Lebon, 76600 Le Havre, France;2. CNRS, LAAS, 7 avenue du Colonel Roche, F-31400 Toulouse, France;3. Université de Toulouse, UPS, LAAS, F-31400 Toulouse, France;4. Université de Toulouse, LAAS, F-31400 Toulouse, France;1. Université de Lyon, INL, France;2. Université de Lyon, CITI, France;1. INRA, UMR 1331, Toxalim, Research Centre in Food Toxicology, F-31027 Toulouse, France;2. Université de Toulouse, ENVT, INP, Toxalim, F-31076 Toulouse, France;1. UTFSM, Valparaíso, Chile;2. INRIA Rennes Bretagne-Atlantique, Rennes, France
Abstract:Assessing the performance and the characteristics (e.g. yield, quality, disease resistance, abiotic stress tolerance) of new varieties is a key component of crop performance improvement. However, the variety testing process is presently exclusively based on experimental field approaches which inherently reduces the number and the diversity of experienced combinations of varieties × environmental conditions in regard of the multiplicity of growing conditions within the cultivation area. Our aim is to make a greater and faster use of the information issuing from these trials using crop modeling and simulation to amplify the environmental and agronomic conditions in which the new varieties are tested.In this study, we present a model-based approach to assist variety testing and implement this approach on sunflower crop, using the SUNFLO simulation model and a subset of 80 trials from a large multi-environment trial (MET) conducted each year by agricultural extension services to compare newly released sunflower hybrids. After estimating parameter values (using plant phenotyping) to account for new genetic material, we independently evaluated the model prediction capacity on the MET (relative RMSE for oil yield was 16.4%; model accuracy was 54.4%) and its capacity to rank commercial hybrids for performance level (relative RMSE was 11%; Kendall's τ = 0.41, P < 0.01). We then designed a numerical experiment by combining the previously tested genetic and new cropping conditions (2100 virtual trials) to determine the best varieties and related management in representative French production regions. Finally, we proceeded to optimize the variety-environment-management choice: growing different varieties according to cultivation areas was a better strategy than relying on the global adaptation of varieties. We suggest that this approach could find operational outcomes to recommend varieties according to environment types. Such spatial management of genetic resources could potentially improve crop performance by reducing the genotype–phenotype mismatch in farming environments.
Keywords:Crop management  Crop model  Genotype by environment interactions  Multi-environment trials
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