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骨骼肌肌纤维形成机制的研究进展
引用本文:李金炜, 史洪岩, 谭茗, 等. 鸡TNNI2基因的真核表达载体构建及功能生物信息学分析[J]. 云南农业大学学报(自然科学), 2021, 36(3): 430-437. DOI: 10.12101/j.issn.1004-390X(n).202008072
作者姓名:李金炜  史洪岩  谭茗  张杉杉  张伟伟  宫晓庆  夏靖秋  孙婴宁
作者单位:1.齐齐哈尔大学 生命科学与农林学院,黑龙江 齐齐哈尔 161000;2.北京市密云区农业农村局,北京 101500
基金项目:国家自然科学基金项目(31402061);黑龙江省自然科学基金项目(YQ2019C025);黑龙江省省属高等学校基本科研业务费科研项目(植物性食品加工技术特色学科专项) (YSTSXK201875)
摘    要:目的构建鸡快骨骼肌亚型肌钙蛋白I 基因(fast skeletal muscle troponin I,TNNI2)的真核表达载体,并在永生化鸡前脂肪细胞系(immortalized chicken preadipocyte cell line,ICP1)细胞中转染和鉴定。方法利用RT-PCR方法获得鸡TNNI2基因的全长CDS区序列,采用定向克隆的方法构建该基因的真核表达载体,并对基因序列进行功能生物信息学分析,构建系统发育树。结果TNNI2基因ORF全长552 bp,编码183个氨基酸,蛋白质分子量大小为21.24 ku,理论等电点(pI)为9.19;fsTnI蛋白无信号肽和跨膜区,亚细胞定位于细胞核,属于亲水性不稳定蛋白质;磷酸化预测含有14个磷酸化位点;二级结构主要以α螺旋的形式存在;同源性比对结果表明:不同物种间的TNNI2基因具有较高的同源性。结论本研究成功构建了TNNI2基因的真核表达载体pCMV-HA-TNNI2,并成功转染ICP1细胞系,本结果可为进一步研究鸡TNNI2基因的功能奠定基础。

关 键 词:真核表达载体  TNNI2  前脂肪细胞  生物信息学分析
收稿时间:2020-08-31
修稿时间:2021-01-12

TNNI1, TNNI2 and TNNI3: evolution,regulation, and protein structure-function relationships
Jinwei LI, Hongyan SHI, Ming TAN, et al. Constructing Eukaryotic Expression Vector and Functional Bioinformatics Analysis of Chicken TNNI2 Gene[J]. JOURNAL OF YUNNAN AGRICULTURAL UNIVERSITY(Natural Science), 2021, 36(3): 430-437. DOI: 10.12101/j.issn.1004-390X(n).202008072
Authors:Jinwei LI  Hongyan SHI  Ming TAN  Shanshan ZHANG  Weiwei ZHANG  Xiaoqing GONG  Jingqiu XIA  Yingning SUN
Affiliation:1.College of Life Science and Agriculture Forestry, Qiqihar University, Qiqihar 161000, China;2.Miyun District Bureau of Agriculture and Rural Affairs of Beijing Municipality, Beijing 101500, China
Abstract:PurposeTo construct the eukaryotic expression vector of fast skeletal muscle troponin I (TNNI2) gene, and to transfect and identify in immortalized chicken preadipocyte cell line (ICP1).MethodsThe RT-PCR was used to clone the whole length of CDS sequence of chicken TNNI2 gene. The eukaryotic expression vector of TNNI2 was constructed by one-step cloning method. The functional bioinformatics analysis was applied to construct the phylogeny tree and study the nucleic acid and the protein of TNNI2.ResultsThe full-length ORF of TNNI2 was 552 bp, and it encodes 183 amino acids, the theoretical size of the protein was 21.24 ku, the theoretical isoelectric point (pI) was 9.19. Furthermore, the protein had no transmembrane region and no signal peptide region, and was mainly located in the nucleus. It belongs to hydrophilic protein. The protein contains 14 phosphorylation sites, secondary structure of this protein is mainly composed of α-helix. In addition, the TNNI2 gene shares highly homology among different species.ConclusionWe constructed the pCMV-HA-TNNI2 eukaryotic recombinant vector and transfected it into ICP1 cells successfully, which lays a foundation for further study of TNNI2 function in chicken.
Keywords:eukaryotic expression vector  TNNI2  preadipocyte  bioinformatics analysis
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