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A simple method for a mini-preparation of fungal DNA
Authors:Ken-ichiro Saitoh  Kana Togashi  Tsutomu Arie  Tohru Teraoka
Affiliation:(1) Graduate School of Agriculture, Tokyo University of Agriculture and Technology, Tokyo, Japan;(2) Laboratory of Plant Pathology, Faculty of Agriculture, Tokyo University of Agriculture and Technology, 3-5-8 Saiwai-cho, Fuchu, Tokyo 183-8509, Japan
Abstract:A simple method was established to prepare DNA from fungal mycelia cultured on an agar plate. The fungi tested successfully with this method contained Zygomycetes, Ascomycetes, Basidiomycetes, and Oomycetes. This method did not require any time-consuming steps to crush or digest mycelia or fractionation in a phenol–chloroform mixture. The DNA was easily extracted by immersing and dispersing the mycelial plugs in a specific buffer (200 mM Tris-HCl, 50 mM ethylenediaminetetraacetic acid, 200 mM NaCl, 1% n-lauroylsarcosine, pH 8.0), then concentrated by ethanol precipitation. The total time to complete the whole procedure was less than 1 h. The quality and quantity were sufficient for polymerase chain reaction amplification and Southern blot analysis.
Keywords:Fungal DNA extraction  Zygomycetes  Ascomycetes  Basidiomycetes  Oomycetes
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