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从福尔马林保存的牙鲆中克隆的18S rDNA进行系统发育分析的可靠性
引用本文:鲍宝龙,杨桂梅,龚小玲,黄连安,任大明.从福尔马林保存的牙鲆中克隆的18S rDNA进行系统发育分析的可靠性[J].上海海洋大学学报,2004(3):193-197.
作者姓名:鲍宝龙  杨桂梅  龚小玲  黄连安  任大明
作者单位:[1]上海水产大学生命科学与技术学院,上海200090 [2]复旦大学生命科学学院,上海200433
基金项目:上海市高等学校发展基金项目(科2000-104),上海市科委重点学科项目资助
摘    要:从福尔马林保存的牙鲆和活体牙鲆肌肉组织中,利用基因拼接的方法首次克隆到1205bp和1295bp的长片段序列。福尔马林保存标本与活体标本DNA序列的同源率为82%;和活体标本的18S rDNA序列相比,标本DNA的碱基缺失率为7%,碱基替换比例为11%。利用福尔马林标本的18S rDNA同源性高的区域进行系统发育分析,表明其结果是可信的。

关 键 词:牙鲆  18S  rDNA  福尔马林保存  系统发育分析
修稿时间:2004/2/24 0:00:00

On the rationality of phylogenetic analyses of 18S rDNA cloned from formalin-fixed Paralichthys olivaceus
BAO Bao-long,YANG Gui-mei,GONG Xiao-ling,HUANG Lian-an,REN Da-ming.On the rationality of phylogenetic analyses of 18S rDNA cloned from formalin-fixed Paralichthys olivaceus[J].Journal of Shanghai Ocean University,2004(3):193-197.
Authors:BAO Bao-long~  YANG Gui-mei~  GONG Xiao-ling~  HUANG Lian-an~  REN Da-ming~
Institution:BAO Bao-long~,YANG Gui-mei~,GONG Xiao-ling~,HUANG Lian-an~,REN Da-ming~
Abstract:Because some species of fishes have been becoming more and more difficult to be collected, many phylogenetic researchers have no other choice but adopt formalin-fixed specimens. There are many reports on molecular phylogenetic analyses based on DNA sequences from formalin-fixed specimens, but seldom researches have discussed the reliability about the DNA sequences from formalin-fixed specimens in applying phylogenetic analysis. Here the partial sequences, 1205bp and 1295bp 18S rDNA we reported, were first cloned form muscle of formalin-fixed and live Paralichthys olivaceus by using gene overlap strategy. Compared with live specimen, 80% bases of 18S rDNA sequence are identical, 7% are deleted, and 11% are replaced in formalin-fixed specimen. The DNA sequences from formalin-fixed and live specimens were used simultaneously in phylogenetic analysis based on high homology area. We think it is reliable in high-class molecular phylogenetic analysis.
Keywords:Paralichthys olivaceus  18S rDNA  formalin-fixed  phylogenetic analyses
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