Comparison of different classical and molecular methods to identify superior self-compatible almond (Prunus dulcis Mill.) genotypes and evaluation of their traits

Almond Prunus amygdalus Batsch syn. Prunus dulcis (Mill.) D.A.Webb] trees are either self- or cross-incompatible, which results in lower fruit set and yields. Flower bagging, fluorescence microscopy, and polymerase chain reaction (PCR) were used to discriminate between self-compatible genotypes obtained from crosses of the self-incompatible female parents (‘121’ and ‘4’) with the self-compatible male parent (‘Tuono’). This study was performed on 80 almond genotypes. The results of this study showed that, in the first cross (‘121’ × ‘Tuono’), genotypes 5, 11, 13, 14, 17, 20, 27, 29, 31, 35, and 38 were identified as being self-compatible and, in the second cross (‘4’ × ‘Tuono’), genotypes 1, 2, 10, 11, 12, 15, 21, 23, 25, 32, 37, 38, and 40 were found to be self-compatible. There were some promising genotypes based on self-compatibility and nut and kernel characteristics; for example, genotype 40 had the highest mean fruit and kernel weights at 2.9 and 1.3 g, respectively. PCR can be used to identify self-compatible genotypes at the juvenile stage. Flower bagging under favourable climatic conditions not only discriminated between self-compatible almond genotypes, but can also be used to measure fruit set percentages. Flower bagging and fluorescence microscopy can be used to determine the level of self-incompatibility. Fluorescence microscopy identified self-incompatible genotypes, even under unfavourable conditions. In general, a combination of all three methods is recommended to increase the accuracy of detecting self-compatible genotypes of almond.