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Are stock assessment methods too complicated?
Authors:A J R Cotter,L Burt,C G M Paxton,C Fernandez,S T Buckland,&   J-X Pan
Affiliation:Centre for Environment, Fisheries and Aquaculture Science, Lowestoft NR33 0HT;;School of Mathematics and Statistics, University of St Andrews, St Andrews KY16 9SS;;Department of Mathematics and Statistics, Fylde College, Lancaster University, Lancaster LA1 4YF;;Department of Mathematics, The University of Keele, Staffordshire ST5 5BG, UK
Abstract:This critical review argues that several methods for the estimation and prediction of numbers‐at‐age, fishing mortality coefficients F, and recruitment for a stock of fish are too hard to explain to customers (the fishing industry, managers, etc.) and do not pay enough attention to weaknesses in the supporting data, assumptions and theory. The review is linked to North Sea demersal stocks. First, weaknesses in the various types of data used in North Sea assessments are summarized, i.e. total landings, discards, commercial and research vessel abundance indices, age‐length keys and natural mortality (M). A list of features that an ideal assessment should have is put forward as a basis for comparing different methods. The importance of independence and weighting when combining different types of data in an assessment is stressed. Assessment methods considered are Virtual Population Analysis, ad hoc tuning, extended survivors analysis (XSA), year‐class curves, catch‐at‐age modelling, and state‐space models fitted by Kalman filter or Bayesian methods. Year‐class curves (not to be confused with ‘catch‐curves’) are the favoured method because of their applicability to data sets separately, their visual appeal, simple statistical basis, minimal assumptions, the availability of confidence limits, and the ease with which estimates can be combined from different data sets after separate analyses. They do not estimate absolute stock numbers or F but neither do other methods unless M is accurately known, as is seldom true.
Keywords:catch-at-age modelling    fisheries data    natural mortality    stock assessment    virtual population analysis    year-class curves
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