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接头连接介导的PCR 扩增马铃薯抗晚疫病基因侧翼序列研究
引用本文:张坤,徐建飞,段绍光,庞万福,卞春松,刘杰,金黎平.接头连接介导的PCR 扩增马铃薯抗晚疫病基因侧翼序列研究[J].中国蔬菜,2013,1(16):29.
作者姓名:张坤  徐建飞  段绍光  庞万福  卞春松  刘杰  金黎平
作者单位:(中国农业科学院蔬菜花卉研究所,农业部薯类作物生物学与遗传育种重点实验室,北京 100081)
基金项目:国家自然科学基金项目(31000738)
摘    要:利用接头连接介导的PCR 技术,以前期NBS profiling 试验获得的1 条马铃薯抗晚疫病基因
片段为基础,设计巢式基因特异性引物,扩增获得两侧序列。结果表明:基因组DNA 经DraⅠ酶切后,
在已有536 bp 片段的左侧和右侧均得到序列延伸,右侧扩增得到2 301 bp,左侧扩增得到820 bp,去除
边界序列后,向左延伸789 bp,向右延伸2 273 bp,拼接后共长3 443 bp。采用GENSCAN 进行基因预测,
发现包含内含子在内的晚疫病抗性基因全长2 413 bp,在该预测基因 的UTR 区域设计特异性引物,在马
铃薯抗病和感病的基因型中扩增包含完整基因在内的2 571 bp 序列,发现该特异候选基因与晚疫病抗性相
连锁。

关 键 词:马铃薯  晚疫病  抗病基因  外源接头介导PCR  

Studies on Flanking Sequence of Potato Late Blight Resistance Gene by
Adapter Ligation-mediated PCR Amplifying
ZHANG Kun,XU Jian-Fei,DUAN Shao-Guang,PANG Wan-Fu,BIAN Chun-Song,LIU Jie,JIN Li-Ping.Studies on Flanking Sequence of Potato Late Blight Resistance Gene by
Adapter Ligation-mediated PCR Amplifying[J].China Vegetables,2013,1(16):29.
Authors:ZHANG Kun  XU Jian-Fei  DUAN Shao-Guang  PANG Wan-Fu  BIAN Chun-Song  LIU Jie  JIN Li-Ping
Institution:(Institute of Vegetables and Flowers, Chinese Academy of Agricultural Sciences, Key Laboratory of Biology and; Genetic Improvement of Tuber and Root Crop, Ministry of Agriculture, Beijing 100081, China)
Abstract:Based on a potato(Solanum tuberosum L.)late blight resistance gene fragment
obtained by NBS profiling,specific nested primers were designed to amplify flanking sequences of the
fragment using adapter ligation-mediated PCR. The results indicated that,after digestion of genomic
DNA by restriction enzyme Dra Ⅰ,2 301 bp and 820 bp length sequence was amplified at the right and
left side of the known gene 536 bp fragment,respectively.Finally,the fragment was elongated 2 273
bp at right and 789 bp at left,which assemble a 3 443 bp full length sequence. A 2 413 bp candidate
gene including intron and extron was predicted with the software GENSCAN.A primer,RDZ,specific
to UTR region of the gene,was developed to amply resistant and susceptible genotypes.The results
showed a 2 571 bp fragment amplified by RDZ is linked to late b light resistance.
Keywords:Potato  Late blight  Resistance gene  Adapter ligation-mediated PC R  
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