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Two-year surveillance of tilapia lake virus (TiLV) reveals its wide circulation in tilapia farms and hatcheries from multiple districts of Bangladesh
Authors:Partho Pratim Debnath  Jerome Delamare-Deboutteville  Mona Dverdal Jansen  Kornsunee Phiwsaiya  Afsana Dalia  Md Abir Hasan  Saengchan Senapin  Chadag Vishnumurthy Mohan  Ha Thanh Dong  Channarong Rodkhum
Institution:1. The International Graduate Course of Veterinary Science and Technology (VST), Faculty of Veterinary Science, Chulalongkorn University, Bangkok, Thailand;2. WorldFish, Penang, Malaysia;3. Norwegian Veterinary Institute, Oslo, Norway;4. Fish Health Platform, Center of Excellence for Shrimp Molecular Biology and Biotechnology Centex Shrimp, Faculty of Science, Mahidol University, Bangkok, Thailand

National Center for Genetic Engineering and Biotechnology (BIOTEC), National Science and Technology Development Agency (NSTDA), Pathum Thani, Thailand;5. WorldFish, Dhaka, Bangladesh;6. Fish Health Platform, Center of Excellence for Shrimp Molecular Biology and Biotechnology Centex Shrimp, Faculty of Science, Mahidol University, Bangkok, Thailand;7. Faculty of Science and Technology, Suan Sunandha Rajabhat University, Bangkok, Thailand

Abstract:Tilapia lake virus (TiLV) is an emerging pathogen in aquaculture, reportedly affecting farmed tilapia in 16 countries across multiple continents. Following an early warning in 2017 that TiLV might be widespread, we executed a surveillance programme on tilapia grow-out farms and hatcheries from 10 districts of Bangladesh in 2017 and 2019. Among farms experiencing unusual mortality, eight out of 11 farms tested positive for TiLV in 2017, and two out of seven tested positive in 2019. Investigation of asymptomatic broodstock collected from 16 tilapia hatcheries revealed that six hatcheries tested positive for TiLV. Representative samples subjected to histopathology confirmed pathognomonic lesions of syncytial hepatitis. We recovered three complete genomes of TiLV from infected fish, one from 2017 and two from 2019. Phylogenetic analyses based on both the concatenated coding sequences of 10 segments and only segment 1 consistently revealed that Bangladeshi TiLV isolates formed a unique cluster within Thai clade, suggesting a close genetic relation. In summary, this study revealed the circulation of TiLV in 10 farms and six hatcheries located in eight districts of Bangladesh. We recommend continuing TiLV-targeted surveillance efforts to identify contaminated sources to minimize the countrywide spread and severity of TiLV infection.
Keywords:Bangladesh  disease surveillance  genome  Nile tilapia  TiLV
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