Relationships between fish assemblages and habitat characteristics in Iowa’s non‐wadeable rivers

Abstract Non‐wadeable river systems are some of the most diverse aquatic ecosystems, but little work has been conducted to quantify the relationships between fish assemblages and habitat characteristics in them. In 2007 and 2008, 21 reaches were sampled on 16 non‐wadeable rivers across Iowa, USA. Fish were sampled in each reach with three different gears, and habitat characteristics (channel morphology, current velocity, instream cover) were measured using standard procedures. Fish assemblages were structured based on drainage basin and reaches and could be categorised as belonging to one of three groups. Reaches in the Missouri River basin group were narrow and had a high proportion of fine substrate. Reaches in the Mississippi River A group were also narrow but had a high proportion of large rocky substrate. Reaches in the Mississippi River B group tended to be wider, deeper and have higher proportions of fine substrate than the other groups. Fish assemblages were closely related to habitat characteristics and reflected differences among the three groups. Results of this study suggest that stream geomorphology may have a substantial influence on fish assemblage structure in large rivers.