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中华鲟GH蛋白二级结构和B细胞抗原表位的预测
引用本文:刘红艳,杨东,张繁荣,余来宁. 中华鲟GH蛋白二级结构和B细胞抗原表位的预测[J]. 农业科学与技术, 2009, 10(2): 46-48,58
作者姓名:刘红艳  杨东  张繁荣  余来宁
作者单位:江汉大学生命科学学院,湖北武汉,430056  
摘    要:笔者采用RT—PCR技术从中华鲟脑垂体中克隆出了生长激素(GH)基因,该文根据已获得的GH氨基酸序列一级结构,运用计算机技术和分子生物学软件对中华鲟GH蛋白二级结构和B细胞表位进行分析和预测,为中华鲟GH蛋白单克隆抗体的制备提供依据,为探讨中华鲟分子调控机理提供参考。

关 键 词:蛋白二级结构  B细胞表位  中华鲟  GH  抗原表位  预测  分子生物学软件  单克隆抗体

Prediction of Secondary Structure and B Cell Epitope of GH Protein from Acipenser sinensis
LIU Hong-yan,YANG Dong,ZHANG Fan-rong,YU Lai-ning. Prediction of Secondary Structure and B Cell Epitope of GH Protein from Acipenser sinensis[J]. Agricultural Science & Technology, 2009, 10(2): 46-48,58
Authors:LIU Hong-yan  YANG Dong  ZHANG Fan-rong  YU Lai-ning
Affiliation:(College of Life Science, Jianghan University, Wuhan 430056)
Abstract:[Objective] The aim was to predict the secondary structure and B cell epitope of growth hormone (GH) protein from Acipenser sinensis. [Method] With the amino acid sequence of GH protein from A.sinensis as the base, the secondary structure of GH protein from A.sinensis was predicted by the method of Garnier-Robson, Chou-Fasman and Karplus-Schulz, and its cell epitope was predicted by the method of Kyte-Doolittle, Emini and Jameson-Wolf. [Result] The sections of 18-23, 55-56, 67-73, 83-86, 112-114, 151-157 and 209-211 in the N terminal of GH protein molecule had softer structure and these sections could sway or fold to produce more complex tertiary structure. The sections of 19-23, 51-71, 84-95, 128-139, 164-176 and 189-196 in the N terminal of GH protein could be the epitope of B cell and there were flexible regions in these sections or near these sections of GH protein molecule. So the dominant regions could be in these sections or near these sections. [Conclusion] The research provided the basis for the preparation of monoclonal antibody of GH protein from A.sinensis and provided the reference for the discussion for the molecular regulation mechanism of A.sinensis.
Keywords:Acipenser sinensis  GH protein  Secondary structure  Cell epitope
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