利用亚硝基胍诱变和高通量测序技术分析疯草内生真菌产SW生物合成通路

阐明产苦马豆素(swainsonine,SW)疯草内生真菌Alternaria Section Undifilum oxytropis中SW的生物合成通路,可以为生物发酵获得大量SW用于抗肿瘤应用和疯草的脱毒育种奠定理论基础和技术支撑。采用不同作用剂量的化学诱变剂亚硝基胍,在28℃,120r·min^-1与Alternaria Section Undifilum oxytropis孢子悬液分别作用5、10、15、20、25、30min,选取生长良好的菌株接种PDA培养基,连续培养发酵24d,应用α-甘露糖苷酶活性分析法检测菌丝及发酵液中SW含量,评价其传代及产SW稳定性。联合使用玻璃珠、液氮破壁法预处理菌丝,选用真菌基因组提取试剂盒提取原始菌株和突变株D4基因组DNA,经纯化、酶切、构建菌株DNA文库,并应用荧光定量PCR法检测评价文库构建质量,利用Ion torrent PGM^TM测序平台进行突变株和原始株高通量全基因组测序。结果表明,经化学诱变成功获得1株突变株D4,利用MIRA软件对高通量测序序列拼接、组装,分别获得突变株D4和原始株相关基因组片段19、21条,经BLAST、GO分析,注释到AlternariaSection Undifilum oxytropis生物合成SW的关键基因SwnK、SwnH2、SwnH1、SwnR和关键酶putative amino acid transporter、pyrroline-5-carboxylate reductase、formate/glycerate dehydrogenase catalytic、saccharopine reductase-like protein,并结合KEGG数据库,预测了AlternariaSection Undifilum oxytropis产SW可能的生物合成通路。本研究为揭示AlternariaSection Undifilum oxytropis生物合成SW机制作出了新的探索尝试。

Analysis of the Biosynthesis Pathway of Produced SW by Endophytic Fungi from Locoweed Using Nitrosoguanidine Mutation and High Throughput Sequencing Technology

HAO Baocheng;SONG Xiangdong;GAO Yan;WANG Xuehong;LIU Yu;CHEN Keyuan;LIANG Yan;HU Yuyao;XING Xiaoyong;WEN Fengqin;HU Yonghao;LIANG Jianping(Key Laboratory of New Animal Drug Project,Gansu Province,Key Laboratory of Veterinary Pharmaceutics Discovery,Ministry of Agriculture,Lanzhou Institute of Husbandry and Pharmaceutical Sciences,Chinese Academy of Agriculture Sciences,Lanzhou 730050,China;College of Veterinary Medicine,Gansu Agricultural University,Lanzhou 730070,China)