辽宁地区猪圆环病毒2型全基因克隆与序列分析

本试验旨在为辽宁地区猪圆环病毒2型(PCV2)的流行病学调查及选择同源性高的毒株进行灭活疫苗研制奠定基础。采集辽宁沈阳、朝阳、铁岭、大连等地疑似断奶仔猪多系统衰竭综合征(PMWS)患病仔猪的病料,利用PCR方法进行PCV2特异性检测,对10份阳性病料进行全基因组克隆和测序分析。结果显示,10株PCV2辽宁株全为强毒株,9株全长1767 bp,1株1768 bp,差异是在1039 bp处多了1个T碱基。与GenBank中的两株疫苗株(HM038034、JQ692110)的核苷酸同源性为95.1%~98.5%,在遗传进化树上,JHZ2为PCV2a型,其余9株毒株为PCV2b型,并且DLS38、LYD32、SYX7在同一小分支,都是同年2~3月发病。10株PCV2 ORF2的氨基酸同源性为89.6%~100.0%,变异度大,存在35个变异点,以突变为主,唯一的糖基化位点(NYS)保守。结果表明,10株辽宁株PCV2抗原性没有明显变化,说明近年来辽宁省猪群中PCV2相关疾病(PCVD)不是因PCV2出现变异株引起的,并且PCV2b型为主要流行型,怀疑PCV2的流行与季节性有关。

Cloning and Sequence Analysis of Complete Genome of Porcine Circovirus Type 2 from Liaoning Province

It was aimed to lay a foundation for epidemiological survey of porcine circovirus type 2(PCV2) in Liaoning province and selection of highly homologous strain inactivated vaccine.Some pigs suspected of having postweaning multisystemic wasting syndrome (PMWS) from Shenyang,Chaoyang,Tieling,Dalian and other places in Liaoning province,were detected by PCR method,then the whole genome of 10 positive samples were cloned and sequenced.The result showed that all of them were virulent strains,9 strains were 1767 bp and 1 strain was 1768 bp,and there was a T base additon at 1039 bp.The nucleotide homology was 95.1% to 98.5% with HM038034 and JQ692110.In the phylogenetic tree,JHZ2 was PCV2a type,the other 9 strains were PCV2b type,DLS38,LYD32 and SYX7 were in the same branch and same onset time.The amino acid homology of ORF2 was 89.6% to 100.0%,there were 35 mutation points,large degree of variation,the only glycosylation site (NYS) was conserved.10 strains did not change significantly,mutants were not due to PCVD,PCV2b was the predominant type,and PCV2 was related with seasonality.