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甜菜TRAP-PCR反应体系的建立及引物开发策略
引用本文:吴则东,刘乃新,秦浩东,倪洪涛,马龙彪.甜菜TRAP-PCR反应体系的建立及引物开发策略[J].中国农学通报,2016,32(6):96-101.
作者姓名:吴则东  刘乃新  秦浩东  倪洪涛  马龙彪
作者单位:(;1.黑龙江省普通高校甜菜遗传育种重点实验室/黑龙江大学,哈尔滨 150080;;2.黑龙江大学农作物研究院,哈尔滨 150080;;3.农业部糖料产品质量安全风险评估实验室/中国农业科学院甜菜研究所,哈尔滨 150080)
基金项目:甜菜现代产业技术体系建设项目“甜菜丰产抗病种质创新及新品种选育”(CARS-210104-01)。
摘    要:以糖用甜菜为材料,利用单因素实验探讨甜菜TRAP-PCR反应体系中dNTPs、引物、模板以及DNA聚合酶等4个因素的浓度变化对扩增结果的影响,最终建立糖用甜菜的最佳TRAP-PCR反应体系。结果表明,在20 μL反应体系中,甜菜TRAP-PCR最优反应体系包含2.0 μL的10×PCR buffer(含Mg2+)、10 ng的模板DNA、0.75 U的Taqase、10 μmol/L固定引物及随机引物各0.8 μL以及0.5 μL的dNTPs (2.5 mmol/L each)。并建立了一种快速开发甜菜TRAP-PCR引物的方法,利用优化后的程序对15份糖甜菜品种进行扩增。结果表明,该体系扩增结果稳定、条带清晰,部分引物多态性丰富,可用于糖用甜菜品种指纹图谱的构建以及其他分子生物学领域的研究。

关 键 词:光波  光波  光强  昆虫趋光性  农业害虫  趋光节律  
收稿时间:8/5/2015 12:00:00 AM
修稿时间:2015/12/24 0:00:00

Establishment of TRAP-PCR Reaction System and Development Strategy of Primers for Beet
Wu Zedong,Liu Naixin,Qin Haodong,Ni Hongtao and Ma Longbiao.Establishment of TRAP-PCR Reaction System and Development Strategy of Primers for Beet[J].Chinese Agricultural Science Bulletin,2016,32(6):96-101.
Authors:Wu Zedong  Liu Naixin  Qin Haodong  Ni Hongtao and Ma Longbiao
Institution:(;1.Key Laboratory of Sugar Beet Genetic Breeding/ Heilongjiang University, Harbin 150080;2.Crop Academy of Heilongjiang University, Harbin 150080;3.Laboratory of Quality & Safety Risk Assessment for Sugar Crops Products, Ministry of Agriculture, P.R.China/Sugar Beet Research Institute of Chinese Academy of Agricultural Sciences, Harbin 150080)
Abstract:With sugar beet as the material, the influence of concentration changes of the four factors of dNTPs, primer, template and DNA polymerase in the beet TRAP-PCR reaction system on the amplification results was discussed with single-factor experiment, and finally the optimal TRAP-PCR reaction system of sugar beet was established. The results showed that in the 20 μL reaction system, the beet TRAP-PCR optimal reaction system contained 2.0 μL of 10×PCR buffer (including Mg2 ), 10 ng of template DNA, 0.75 U of Taqase, respectively 0.8 μL of 10 μmol/L fixed primer and random primer, and 0.5 μL of dNTPs (2.5 mmol/L each). In addition, a method for rapid development of beet TRAP-PCR primer was proposed, 15 varieties of sugar beer were amplified with the optimized program. The results show that the system has stable amplification results, clear bans and abundant polymorphism of partial primer, and can be used for the construction of sugar beet variety fingerprint and research in other fields of molecular biology.
Keywords:sugar beet  TRAP-PCR  optimization  primer development strategy
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