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利用BSA-Seq方法鉴定向日葵耐盐候选基因
引用本文:贾秀苹,卯旭辉,岳 云,陈炳东,梁根生,王兴珍.利用BSA-Seq方法鉴定向日葵耐盐候选基因[J].中国油料作物学报,2018,40(6):777.
作者姓名:贾秀苹  卯旭辉  岳 云  陈炳东  梁根生  王兴珍
作者单位:1.甘肃省农业科学院作物研究所,甘肃兰州,730070; 2.甘肃省农业技术推广总站, 甘肃兰州,730070; 3.甘肃省科学技术协会,甘肃兰州,730000
基金项目:国家自然科学基金地区基金(31360343);甘肃省特色作物产业技术体系;甘肃省农业科学院科研条件建设及成果转化项目(2016GAAS35);甘肃省生物技术研究与应用开发项目(GNSW-2016-6);特色油料产业技术体系建设项目(CARS-14-2-22)
摘    要:挖掘向日葵耐盐基因对作物耐盐品种选育具有重要的意义。本研究利用高耐盐自交系Y07-136R(父本)和不耐盐自交系Y05-222A(母本)及其构建的包含600个单株的F2分离群体为试验材料,挑选分离群体中耐盐和不耐盐的极端分离株系各50株单株,分别构建两个DNA池用于高通量测序以分析筛选向日葵耐盐候选基因。通过本研究共发掘到6个耐盐关键候选基因(Ha0_73Ns.730/Ha10.228/Ha12.2377/Ha2.3822/Ha8.182/Ha9.5434),功能注释分别为依赖ATP的RNA解旋酶、热休克蛋白、生长素结合蛋白、溶质运载蛋白家族成员、核糖体蛋白S21家族成员及未知功能蛋白。通过候选基因同源分析、代谢通路分析及共表达基因分析发现,这些基因参与植物逆境胁迫调控,可能具有耐盐的生物学功能。本研究结果为耐盐基因的克隆及功能解析提供了重要候选基因,同时为向日葵耐盐新品种的选育提供了重要的分子标记。

关 键 词:耐盐基因  BSA-Seq  同源分析  功能注释  向日葵  

Identification of major salt-tolerant genes via BSA-Seq method in sunflower
JIA Xiu-ping,MAO Xu-hui,YUE Yun,CHEN Bing-dong,LIANG Gen-sheng,WANG Xing-zhen.Identification of major salt-tolerant genes via BSA-Seq method in sunflower[J].Chinese Journal of Oil Crop Sciences,2018,40(6):777.
Authors:JIA Xiu-ping  MAO Xu-hui  YUE Yun  CHEN Bing-dong  LIANG Gen-sheng  WANG Xing-zhen
Institution:1. Institute of Crops, Gansu Academy of Agriculture Science, Lanzhou 730070,China;  2.Gansu Agricultural Technology Station,Lanzhou 730070, China;  3. Gansu Science and Technology Association, Lanzhou 730000, China
Abstract:Sunflower is known as the pioneer crop in saline soil. Identification of salt-tolerant genes from sunflower has great significance to crop salt-tolerance breeding. In this study, an F2 population with 600 individuals was constructed using salt-tolerant line Y07-136R and salt-sensitive line Y05-222A; 50 F2 salt-tolerant individuals and 50 salt-sensitive individuals were selected respectively to construct 2 DNA pools which were used for high-throughput sequencing. The key candidate genes associated with salt-tolerant genes were identified via BSA-Seq. The results showed that, total 6 key salt-tolerant genes, Ha0_73Ns.730, Ha10.228, Ha12.2377, Ha2.3822, Ha8.182 and Ha9.5434, were identified and the annotation functions were ATP-dependent RNA helicase, heat shock protein, auxin-binding protein, solute carrier family 35 members, putative ribosomal protein S21 family protein and uncharacterized protein. The results of candidate genes homology analysis, metabolic pathway analysis and co-expression analysis showed that these 6 candidate genes may be involved in plant stress regulation. This research provided key salt-tolerant candidate genes and also provides important markers for salt-tolerant breeding in sunflower.
Keywords:salt-tolerant genes  BSA-Seq  homology analysis  function annotation  sunflower  
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