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三倍体胚乳性状遗传模型的上位性分析
引用本文:程君奇,吴建国,石春海,朱军. 三倍体胚乳性状遗传模型的上位性分析[J]. 浙江大学学报(农业与生命科学版), 2007, 33(1): 1-7
作者姓名:程君奇  吴建国  石春海  朱军
作者单位:1. 浙江大学,生物信息学研究所,浙江,杭州,310029
2. 浙江大学,农学系,浙江,杭州,310029
基金项目:国家高技术研究发展计划(863计划)
摘    要:    基于双列杂交体系提出一个遗传模型分析三倍体胚乳性状直接和母体上位性效应,直接加性、显性效应,细胞质效应,以及母体加性和显性效应.并运用混合线形模型分析该遗传模型.用最小范数二阶无偏估算法 (MINQUE) 估算单性状的方差分量和性状间的协方差分量.用蒙特卡罗模拟检测遗传参数的估算和模型的稳定性.模拟分析同时应用于双列杂交的平衡设计和非平衡设计.模拟结果显示在估算单性状的方差和性状间的协方差时,平衡设计和非平衡设计没有显著差异.通过估算实际水稻种子性状数据,说明在经典数量遗传研究中,加加上位变异分析是可行的.

关 键 词:上位性效应  双列杂交  蒙特卡罗模拟  方差  协方差  MINQUE
文章编号:1008-9209(2007)01-0001-07
修稿时间:2006-05-30

Analysis of epistasis: A genetic model for triploid endosperm traits
CHENG Jun-qi,WU Jian-guo,SHI Chun-hai,ZHU Jun. Analysis of epistasis: A genetic model for triploid endosperm traits[J]. Journal of Zhejiang University(Agriculture & Life Sciences), 2007, 33(1): 1-7
Authors:CHENG Jun-qi  WU Jian-guo  SHI Chun-hai  ZHU Jun
Affiliation:1. Institute of Bioinformaties, Zhejiang University, Hangzhou 310029, China; 2. Department of Agronomy, Zhejiang University, Hangzhou 310029, China
Abstract:A genetic model for triploid endosperm traits was proposed on the basis of diallel cross system to analyze additive by additive epistasis of direct effect (AA) and maternal effect (AmAm) along with direct additive effect, dominance effect, cytoplasm effect, as well as maternal additive and dominance effects. Monte Carlo simulations were conducted to test the estimation of genetic parameters and robust of this genetic model. Unbiased estimation of the variance components for single trait and covariance components between two traits can be obtained by using minimum norm quadratic unbiased estimation (MINQUE) method for both balanced design and unbalanced design without significant difference. A worked example was used to illuminate the application of analyzing additive by additive epistatic variation.
Keywords:MINQUE  epistatic effect  diallel cross  Monte Carlo simulation  variance  covariance  MINQUE
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