Beaver dams,streamflow complexity,and the distribution of a rare minnow,Lepidomeda copei

Freshwater fishes are threatened globally, and often too little is known about threatened species to effectively guide their conservation. Habitat complexity is linked to fish species diversity and persistence, and degraded streams often lack habitat complexity. Beaver Castor spp., in turn, have been used to restore streams and increase habitat complexity. The northern leatherside chub Lepidomeda copei is a rare, small‐bodied, drift‐feeding minnow that has anecdotally been observed to use complex habitats associated with beaver dams in the western United States. To investigate this anecdote, we conducted fish and habitat surveys, the latter focusing on quantifying habitat complexity, in a sub‐basin of the Upper Snake River Basin in the USA. Complementary generalised linear model and path analyses revealed that northern leatherside chub occurred more often at sites with complex streamflows, and streamflows were more complex when beaver dams were present and pools were deeper. Northern leatherside chubs were also more likely to occur when temperatures were warmer, aquatic macrophytes were abundant and stream channels were narrow and deep. The linkage between chubs, complex streamflows and beaver dams needs to be evaluated more broadly to completely understand its role in the rangewide status of the species. However, it does suggests that increased use of beaver reintroductions and dam analogues for stream restoration could be a boon for the northern leatherside chub, but such efforts should be monitored to determine their effectiveness to help adapt beaver‐based restoration approaches to best benefit the species.     

基于P-S-R框架模型试点研究高寒地区生态承载力——以甘肃省迭部县为例

全面客观评价生态资源承载能力,进而为区域可持续发展提供理论依据。以甘肃省迭部县为例,首先,采用压力-状态-响应(P-S-R)模型构建生态承载力评估指标体系,运用层次分析法(Analytic Hierarchy Process,AHP)确定各指标权重,评估生态环境承载力现状;其次,在生态功能区层面对迭部县水源涵养功能及生物多样性功能进行评价;最后,对生态承载力状况进行成因解析。研究结果表明：（1）迭部县整体生态承载力得分为0.239,处于“较强”承载力状态,构成整体生态承载力的生态弹性力、资源和环境承载力和人类社会影响力得分分别为0.222、0.062和0.063。（2）2016年,迭部县单位面积水源涵养量为111.76 mm,水源涵养功能处于“高”状态,其中,水源涵养功能较高地区主要集中在以草地和针阔混交林为主的区域。（3）自然栖息地面积占迭部县总面积的83.67%,其自然栖息质量指数(Natural Habitant Quality Index,NHQI)处于“高”状态。（4）从自然和经济2个因素进行分析,发现迭部县生态环境条件较好,但林草地面积已呈现出逐渐减少状态,因此需要通过合理科学的开发引导,发展文化旅游事业,推动迭部县的可持续发展。     

The microbial diversity and structure in peatland forest in Indonesia

The microbial community structure and function under forest in tropical peatlands are poorly understood. In this study, we investigated the microbial community structure and diversity in natural peat swamp forest soil, disturbed peat soil and mineral soil in Central Kalimantan, Indonesia, using 454 pyrosequencing. The results showed that the natural peat soil had the greatest fungal species richness (Chao1), which was significantly (p < .05) larger than that in the other two soils. Community structure of both fungi and bacteria in natural peat soil differed significantly from that in the disturbed peat soil (p = .039 and p = .045, respectively). Ascomycota (40.5%) was the most abundant phylum across the three soils followed by Basidiomycota (18.8%), Zygomycota (<0.1%) and Glomeromycota (<0.1%). The linear discriminant analysis with effect size (LEfSe) showed that Ascomycota (p < .05) and genus Gliocephalotrichum (p < .05) dominated in natural peat soil. Functionally, pathotrophs were more abundant in disturbed peat soil (p < .05). Proteobacteria (43.8%) were the most abundant phylum followed by Acidobacteria (32.6%), Actinobacteria (9.8%), Planctomycetes (1.7%). Methylocystis, Telmatospirillum, Syntrophobacter, Sorangium and Opitutus were the more abundant genera in disturbed peat soil, whereas Nevskia and Schlesneria were more abundant in mineral soil and natural peat soil, respectively. The natural peat forest soil supported a more diverse microbiology; however, the land use of such a soil can change its microbial community structure. The results provide evidence that the disturbance of tropical peat land could lead to the introduction and spread of a large number of fungal diseases     

Genetic diversity of herbicide-resistant and -susceptible Avena fatua populations in North Dakota and Minnesota

Genetic diversity within and among 20 herbicide-resistant (HR) and 16 herbicide-susceptible (HS) Avena fatua multi-field populations was determined using 82 polymorphic loci resulting from two intersimple sequence repeat (ISSR) primers and one long-primer random amplified polymorphic DNA (LP-RAPD) primer. Collections from the Red River Valley of North Dakota and Minnesota, sampled in 1964 and 2000, represented A. fatua populations before and after intensive exposure to herbicides. A 1995 collection from south-west North Dakota represented A. fatua exposed to low herbicide selection. Despite differences in years of herbicide exposure among collections, both HR and HS populations from every collection maintained nearly similar levels of ISSR and RAPD diversity. Genetic differentiation among populations (G_ST) varied from 11% to 13% among HR populations and from 9% to 16% among HS populations, indicating that 84–91% of total variation remained within HS or within HR populations. Minimal difference in gene diversity between HR and HS is consistent with multiple origins of resistance, where HR A. fatua most likely evolved from diverse founding individuals.     

超级居群：连接生境多样性和生物多样性之桥

在达尔文（1859）看来,新物种只有通过竞争或者自然选择的方式淘汰原有物种才能进入由其他物种占据的生境并成功定居下来。然而,新物种进入生境并成功定居还有另外一个途径,那就是由于超级居群能在全球尺度上改变整个地球环境,从而能在原有环境中创造出一些全新的微环境来,正是这些全新的微环境使新物种避开了和原有定居者的剧烈竞争,很容易地进入了一直由其他物种占据的生境中并成功地定居下来。换句话说,超级居群导致了全球环境的分化,导致了全球尺度上的生境多样性。同时,超级居群通过环境的异质化为新物种准备好了很多全新的微环境,新物种在全新的微环境中的成功定居实现了新物种和原有定居者的长期共存。而这种长期共存导致了整个生物圈的生物多样性的增加。超级居群是地球上很多新环境的创造者,是生境多样性和生物多样性之间的桥梁,据此就能很容易地解释新物种为什么不时能和原有定居者共存甚至依赖于原有定居者,从而导致二者间剧烈竞争缺失的现象。     

豫西山区森林群落结构与物种多样性研究

对栾川、卢氏两地不同森林群落的类型、种类组成与结构,以及物种多样性等进行了分析,结果表明:群落的物种组成比较丰富,在生活型组成上以地上芽植物所占比例较大,物种多样性指数的顺序是阔叶林>混交林>针叶林,通过多样性指数和均匀度指数的分析可以较为客观的评价群落的稳定性。     

Resistance to yellow rust in Triticum dicoccoides. II. Crosses with resistant Triticum dicoccoides sel. G-25

A comparison was made between the genes in 29 new selections of wild emmer wheat resistant to yellow rust over wide geographic areas and the previously extensively studied selectionTriticum dicoccoides G-25. In 23 selections the resistance may be conferred by 1 dominant gene; these include 11 selections in which the gene is different from the dominant gene in sel. G-25 and two others in which the genes were closely linked or allelic to the gene in G-25, differing from sel. G-25 by race-specificity. Two dominant genes different from the gene in sel. G-25, seem to be present in one selection. In five selections the resistance may be conferred by one or two recessive genes, including three instances in which the recessive gene was associated with a dominat gene. Our findings show that at least 19 out of the 29 selections studied possess genes which are different from the gene inT. dicoccoides sel. G-25.Samenvatting In dit onderzoek werden 29 nieuwe resistente wilde-emmer selecties (Triticum dicoccoides) gekruist met de reeds uitvoerig bestudeerde resistente selectie G-25, om na te gaan of de resistentie van de nieuwe selecties wordt veroorzaakt door genen op dezelfde locus als het dominante gen in sel. G-25 of dat er andere loci bij zijn betrokken. De ouders, de F₁-en F₂-populaties van een bepaalade selectie werden in het kiemplantstadium getoetst met één Israëlisch gele-roest isolaat van fysio 2E0 of van fysio 2E18. In de uitsplitsende F₂-populaties werden de niet-sporulerende planten als resistent beschouwd en de sporulerende als vatbaar.In de F₂-populaties van 12 herkomsten werden geen vatbare planten gevonden, hetgeen er op duidt dat de resistentie wordt veroorzaakt door een gen op dezelfde locus als het gen in G-25 of door een gen dat neuw gekoppeld is aan het gen in G-25. Voor twee van deze herkomsten kan op basis van een fysio-specifieke interactie worden vastgesteld dat de resistentie berust op allelen die verschillen van het allel in sel. G-25. In 11 herkomsten werd een uitsplitsing voor twee dominante gene gevonden (RS=151), waarbij het tweede dominante gen uit de getoetste nieuwe selectie afkomstig is. De aanwezigheid van twee dominante genen verschillend van het gen in sel. G-25 werd gevonden in één herkomst (631). In de overige vijf selecties bleek de resistentie te worden veroorzaakt door één of twee recessieve genen waarnaast in drie gevallen ook nog een dominant gen werd gevonden.De resultaten tonen aan dat tenminste 19 van de 29 bestudeerde selecties resistentiegenen bezitten die verschillen van het gen inT. dicoccoides sel. G-25. Slechts in twee van deze selecties kan het gen allel zijn met het gen in sel. G-25.     

Molecular genetics of behaviour: research strategies and perspectives for animal production

Genetic factors are undoubtedly involved in inter-individual variability of the behaviours that may be important for livestock production, as shown by pedigree studies, comparison of genetic stocks raised in the same environment, and selection experiments. The knowledge of gene polymorphisms responsible for genetic variability would increase the efficiency of selection, as shown for instance by the identification of the ryanodine receptor gene that harbours the mutations responsible for the porcine stress syndrome, that allows the eradication of the susceptibility allele. One strategy is to screen systematically the genes that are known to be involved in regulation of behaviour (functional candidate genes). This strategy is however very difficult for most behavioural traits, since behaviour is an emerging function from the whole brain/body and the molecular pathways involved in genetic variability are very poorly understood. Another strategy is to investigate linkage between trait variation and genetic markers in a segregating population (usually an intercross or backcross between two strains or breeds contrasting for the trait under study). It allows the detection of genomic regions influencing that trait (quantitative trait loci or QTL), and further investigation aims at the identification of the gene(s) located in each of these regions and the molecular polymorphisms involved in phenotypic variation. Although many QTL have been published for behavioural traits in experimental animals, very few examples are available where strong candidate genes have been identified. Further progress will be very much dependent upon the careful definition of behavioural traits to be studied (including their importance for animal production), on the reliability of their measurement in a large number of animals and on the efficient mastering of environmental factors of variability. The fast increase in the knowledge of genome sequence in several species will undoubtedly facilitate the application to farm animal species of the knowledge obtained in model organisms, as well as the use of model organisms to explore candidate genes detected by QTL studies in farm animals.     

中国山羊品种资源及其遗传多样性研究

本文论述了中国山羊的起源、品种遗传资源及其遗传多样性的研究进展。最新调查 显示中国的山羊品种达50个,其中43个为地方品种,4个培育品种,3个引入品种,许多品种 具有独特的生产性能或适应能力。大量研究表明,我国山羊遗传多样性较为丰富。     

新疆山地鸟类和哺乳类多样性及其区系特征

新疆各类陆栖脊椎动物近 70 0种 ,占中国这一类动物种数的 32 %,其中鸟兽资源尤其丰富 ,计有 42 5种鸟类和 1 5 5种兽类 (哺乳类 ) ,占中国鸟兽种数的 31 %。本文主要以新疆三大山区———阿尔泰山、天山、昆仑 -阿尔金山地区鸟类和哺乳类动物的多样性及区系分布作综合性介绍和分析。根据实地考察和以往文献资料 ,新疆阿尔泰山区记录在 1 2 4种鸟类 ,其中古北界北方型鸟类 5 1种 (占 41 .1 %) ,中亚型鸟类 31种 (占 2 5 .0 %) ,广布种鸟类 2 7种 (占 2 1 .8%) ,其他类型1 5种 (占 1 2 .1 %) ,显出以北方型泰加林鸟类为主的鸟类区系特征 ;分布的 5 0种兽类 ,区系上以古北界北方泰加林为主 ,即北方型兽类占该山区种数的 5 2 %。天山山区记录的鸟类大约2 81种 ,北方型种类占绝对优势 ,即北方型 1 0 6种 (占 37.72 %) ,北方广布型 76种 (占 2 7.0 4 %) ,中亚型 39种 (占 1 3.88%) ,高地型 1 8种 (占 6.41 %) ,广布型 33种 (占 1 1 .74%) ,东北型 9种 (占 3.2 1 %)。兽类分布有 62种 ,北方型兽类区系占优势 ,有 30种 (占 48.40 %) ,广布型 1 2种 (占 1 9.40 %) ,中亚型 1 1种 (占 1 7.70 %) ,特有种 9种 (占 1 4.5 0 %)。昆仑—阿尔金山地区 96种鸟类中 ,中亚类型成份占 2 8.1 %,高地型成分占 2 6%,北方型成?