Comparing the behavioural thermoregulation response to heat stress by Atlantic salmon parr (Salmo salar) in two rivers

Climate change is expected to increase the frequency and magnitude of extreme thermal events in rivers. The Little Southwest Miramichi River (LSWM) and the Ouelle River (OR) are two Atlantic salmon (Salmo salar) rivers located in eastern Canada, where in recent years, water temperatures have exceeded known thermal limits (~23°C). Once temperature surpasses this threshold, juvenile salmon exploit thermal heterogeneity to behaviourally thermoregulate, forming aggregations in coolwater refuges. This study aimed to determine whether the behavioural thermoregulation response is universal across rivers, arising from common thermal cues. We detailed the temperature and discharge patterns of two geographically distinct rivers from 2010 to 2012 and compared these with aggregation onset temperature. PIT telemetry and snorkelling were used to confirm the presence of aggregations. Mean daily maximum temperature in 2010 was significantly greater in the OR versus the LSWM (p = 0.005), but not in other years (p = 0.090–0.353). Aggregations occurred on 14 and 9 occasions in the OR and LSWM respectively. Temperature at onset of aggregation was significantly greater in the OR (T_onset = 28.3°C) than in the LSWM (T_onset = 27.3°C; p = 0.049). Logistic regression models varied by river and were able to predict the probability of aggregation based on the preceding number of hours >23°C (R² = 0.61 & 0.65; P₅₀ = 27.4°C & 28.9°C; in the OR and LSWM respectively). These results imply the preceding local thermal regime may influence behaviour and indicate a degree of phenotypic plasticity, illustrating a need for localised management strategies.     

Cohort‐specific variation in juvenile coho salmon habitat use

In this study, we examined summer and fall freshwater rearing habitat use by juvenile coho salmon (Oncorhynchus kisutch) in the quickly urbanising Big Lake drainage in south‐central Alaska. Habitat use was assessed by regressing fish count data against habitat survey information across thirty study sites using generalised linear mixed models. Habitat associations were examined by age‐0 and age‐1+ cohorts separately, providing an opportunity to compare habitat use across different juvenile coho salmon life stages during freshwater rearing. Regression results indicated that the age‐0 cohorts were strongly associated with shallow, wide stream reaches with in‐stream vegetation, whereas age‐1+ cohorts were associated with deeper stream reaches. Furthermore, associations between fork length and habitat characteristics suggest cohort‐specific habitat use patterns are distinct from those attributable to fish size. Habitat use information generated from this study is being used to guide optimal fish passage restoration planning in the Big Lake drainage. Evidence for habitat use partitioning by age cohort during freshwater juvenile rearing indicates that pooling age cohorts into a single “juvenile” stage for the purposes of watershed management may mask important habitat use dynamics.     

聚丙烯酰胺凝胶电泳法鉴定禽呼肠孤病毒

从感染禽呼肠孤病毒的细胞中,以SDS和酚提取病毒核酸,通过聚丙烯酰胺凝胶电泳(PAGE)法将分节段的核酸分开,经银染色显示,呈3-3-1-3分布,此法可用于禽呼肠孤病毒的快速检测、鉴定。同样方法未能使传染性法氏囊病毒核酸显示。     

Seasonal growth and diet of juvenile chinook salmon (Oncorhynchus tshawytscha) in demonstration channels and the main channel of the Waitaki River, New Zealand, 1982–1983

Abstract– Juvenile chinook salmon in the Waitaki River, New Zealand and demonstration channels, living at about 16°C, increased in length by 0.32 mm day⁻¹ between 4 November and 4 March. They gained weight quickly, accumulated large visceral fat deposits and had high conditions factors. At 1600 h, stomachs averaged half full. The number of prey tended to decline as the fish grew and consumed larger items. Initially the diet was based mainly on chironomid larvae, but by December it included a diversity of prey in more equal proportions. These included Deleatidium in the Waitaki; amphipods in the demonstration channels; various trichopterans, hemipterans, elmid beetles, zooplankton. terrestrial dipterans and a variety of other prey. There were significant differences between sites in numbers of prey consumed and these probably reflected differences in the benthos. Diets in the Waitaki differ from those in the Rakaia River and the food of juvenile salmon appears closely linked to the availability of a diverse range of possible prey.     

抗鸡传染性腺胃炎酶标抗体的制备和应用

在前期从患病鸡腺胃内分离到呼肠孤病毒的基础上，以该病毒为免疫原对兔进行免疫制备高免血清，分离纯化IgG，进行辣根过氧化物酶（HRP）标记，并用ELISA双抗体夹心法对山东省青岛、枣庄、泰安等地区采集的传染性腺胃炎的腺胃样品进行检测，结果表明制备的抗鸡传染性腺胃炎呼肠孤病毒的酶标抗体检测传染性腺胃炎特异性强、灵敏度高、较简便。     

A reovirus disease in cultured mud crab, Scylla serrata, in southern China

A reovirus, designated mud crab reovirus (MCRV), associated with large economic losses was recently isolated from marine cultured mud crab, Scylla serrata, in southern China. The complete viral particle is 70 nm in diameter, icosahedral and non-enveloped. The virus infects connective tissue cells of the hepatopancreas, gills and intestine in mud crab and develops in the cytoplasm. Hundred per cent mortality was observed in mud crab experimentally infected by intramuscular injection, bath inoculation and oral inoculation, while cohabitation infection caused 80% mortality. The viral genome consists of 13 linear dsRNA segments, with an electrophoretic pattern 1/5/7. The results of this study suggest that the virus is highly pathogenic and can be transmitted enterically as well as via the body surface of mud crab. Although the genomic organization of this virus is different from that of the other crab reoviruses, CcRV-W2 and DpPV, all three of these reoviruses have similar electrophoresis patterns. Therefore, MCRV may be a new member of the DpPV and CcRV-W2 group.     

禽呼肠病毒P10、P17非结构蛋白基因的克隆及序列分析

根据GenBank上的禽呼肠病毒(ARV)S1基因序列,设计并合成了一对跨越P10和P17非结构蛋白基因的特异性引物,对13个ARV毒株进行RT-PCR扩增、克隆及序列测定。结果显示,13个ARV毒株的P10蛋白基因ORF全长均为297bp,编码98个氨基酸;P17蛋白基因ORF全长为441bp,编码146个氨基酸。这13个ARV毒株P10、P17蛋白基因核苷酸同源性分别在96.6%~100%和95.2%~99.3%之间,推导的氨基酸同源性分别在98.2%~100%和91.9%~99.0%之间。将这13个ARV毒株与GenBank上其他正呼肠病毒毒株,包括番鸭株(DRV)和飞狐上分离到的内尔森海湾病毒(NelsonBayvirus,NBV)及两个澳洲分离株(ARM-1和SOM-4)进行同源性比较和遗传进化树分析,结果表明,呼肠病毒有地域和种类的差别。     

禽呼肠孤病毒P17蛋白基因在大肠杆菌中的表达及其ELISA检测方法的建立

用设计合成的1对跨越禽呼肠孤病毒（ARV）P17非结构蛋白基因完整开放阅读框（ORF）的特异性引物，对ARVS1133株进行了RT-PCR扩增。扩增产物与pGEX-4T-1原核表达载体连接后，转化大肠杆菌BL21感受态细胞。经0．2mmol／LIPTG诱导，表达的融合蛋白分子质量为42.4ku，占茵体总蛋白的34％。表达产物P17蛋白经不同浓度尿素纯化后，纯度达到85％。Western-blotting显示，纯化的P17蛋白能与感染ARV的阳性血清反应，说明其具有抗原性。以此重组蛋白为包被抗原初步建立了用于鉴别检测ARV活病毒感染与灭活疫苗免疫的SPF鸡血清的ELISA。     

禽呼肠孤病毒C-98分离株S3基因的克隆及序列分析

参考GenBank中禽呼肠孤病毒S3基因序列设计一对引物,以禽呼肠孤病毒内蒙古分离株(C-98)基因组RNA为模板,应用RT-PCR方法获得病毒的S3基因,并克隆到pMD19-T载体后测序。应用计算机软件将所测定序列与参考毒株ARV 176、ARV S1133、ARV 138的S3基因序列进行比较,核苷酸同源性分别为99.8%,99.6%,87.7%,推导其氨基酸同源性分别为99.5%,98.9%,94.8%。应用PHD程序和DNAStar软件,对S3基因所编码的σB蛋白结构进行预测,结果表明,σB蛋白为结构紧密的球状蛋白分子。