西藏低温放线菌的多样性及其生物活性

【目的】研究西藏低温环境下放线菌的组成及其抑菌效果和酶活性,为放线菌新药物先导化合物和高活性酶的筛选提供资源。【方法】从西藏低温地区采集16份土样,用平板稀释法分离放线菌,经形态学和培养特征初步鉴定后得到有代表性的低温放线菌,对这些代表性菌株的16S rRNA基因序列进行系统发育分析,对其进行鉴定;采用菌丝生长速率法测定代表性低温放线菌菌株发酵液对11种农作物真菌的抑菌活性,并对其纤维素酶、蛋白酶、淀粉酶等活性进行测定。【结果】从16份土样中共分离到22株有代表性的低温放线菌,其在10~25℃均能生长。16S rRNA基因序列分析表明,这22株菌分布于放线菌门放线菌纲2个亚目3个科的3个属,即链霉菌亚目(Streptomycineae)链霉菌科(Streptomycetaceae)链霉菌属(Streptomyces)、假诺卡氏亚目(Pseudonocardineae)束丝放线菌科(Actinosynnemataceae)伦茨氏菌属(Lentzea)和假诺卡氏亚目(Pseudonocardineae)假诺卡氏菌科(Pseudonocardiaceae)拟无支酸菌属(Amycolatopsis),其中以链霉菌属最多,占分离菌的91%。在分离的22株代表性低温放线菌菌株中,27.3%的菌株有抑菌活性;40.9%的菌株具有纤维素酶活性,22.7%的菌株具有淀粉酶活性,18.2%的菌株具有蛋白酶活性。【结论】西藏低温生境中蕴藏着丰富的低温放线菌资源,其中一些菌株具有拮抗活性和酶活性。     

Anti-Mycobacterial Nucleoside Antibiotics from a Marine-Derived Streptomyces sp. TPU1236A

Five new nucleoside antibiotics, named streptcytosines A–E (1–5), and six known compounds, de-amosaminyl-cytosamine (6), plicacetin (7), bamicetin (8), amicetin (9), collismycin B (10), and SF2738 C (11), were isolated from a culture broth of Streptomyces sp. TPU1236A collected in Okinawa, Japan. The structures of new compounds were elucidated on the basis of their spectroscopic data (HRFABMS, IR, UV, and 2D NMR experiments including ¹H-¹H COSY, HMQC, HMBC, and NOESY spectra). Streptcytosine A (1) belonged to the amicetin group antibiotics, and streptcytosines B–E (2–5) were derivatives of de-amosaminyl-cytosamine (6), 2,3,6-trideoxyglucopyranosyl cytosine. Compound 1 inhibited the growth of Mycobacterium smegmatis (MIC = 32 µg/mL), while compounds 2–5 were not active at 50 µg/disc. Bamicetin (8) and amicetin (9) showed the MICs of 16 and 8 µg/mL, respectively.     

Biosynthetic Modularity Rules in the Bisintercalator Family of Antitumor Compounds

Diverse actinomycetes produce a family of structurally and biosynthetically related non-ribosomal peptide compounds which belong to the chromodepsipeptide family. These compounds act as bisintercalators into the DNA helix. They give rise to antitumor, antiparasitic, antibacterial and antiviral bioactivities. These compounds show a high degree of conserved modularity (chromophores, number and type of amino acids). This modularity and their high sequence similarities at the genetic level imply a common biosynthetic origin for these pathways. Here, we describe insights about rules governing this modular biosynthesis, taking advantage of the fact that nowadays five of these gene clusters have been made public (thiocoraline, triostin, SW-163 and echinomycin/quinomycin). This modularity has potential application for designing and producing novel genetic engineered derivatives, as well as for developing new chemical synthesis strategies. These would facilitate their clinical development.     

Diazaquinomycins E–G,Novel Diaza-Anthracene Analogs from a Marine-Derived Streptomyces sp.

As part of our program to identify novel secondary metabolites that target drug-resistant ovarian cancers, a screening of our aquatic-derived actinomycete fraction library against a cisplatin-resistant ovarian cancer cell line (OVCAR5) led to the isolation of novel diaza-anthracene antibiotic diazaquinomycin E (DAQE; 1), the isomeric mixture of diazaquinomycin F (DAQF; 2) and diazaquinomycin G (DAQG; 3), and known analog diazaquinomycin A (DAQA; 4). The structures of DAQF and DAQG were solved through deconvolution of X-Ray diffraction data of their corresponding co-crystal. DAQE and DAQA exhibited moderate LC₅₀ values against OVCAR5 of 9.0 and 8.8 μM, respectively. At lethal concentrations of DAQA, evidence of DNA damage was observed via induction of apoptosis through cleaved-PARP. Herein, we will discuss the isolation, structure elucidation, and biological activity of these secondary metabolites.     

6株野生植物内生放线菌防病促生作用的初步研究

为了寻找具有内生习性的植病生防放线菌,从采自秦岭的14种野生植物中分离得到29株内生放线菌,对其进行了皿内拮抗试验、发酵液抑菌试验和温室防病促生试验。结果发现,有6株菌表现出显著的抑菌活性,其中菌株SF1对粉红聚端孢、SF4对苹果炭疽菌、SF20对灰葡萄孢均有较强的抑制作用;菌株SG2的代谢产物具有很高的抑菌活性,其发酵滤液对茄链格孢的抑菌圈直径达到35 mm;菌株SG2对温室番茄早疫病的防治效果达到89.72%,菌株SF4对黄瓜白粉病的温室防效达到89.61%,菌株SF20对番茄和黄瓜具有明显的促生作用。可见,从野生植物中分离具有内生习性和抑菌作用的放线菌,直接用于生物防治是可行的。     

根结线虫拮抗放线菌的筛选及菌株HA10002的鉴定与活性物质分析

为了筛选获得对根结线虫具有拮抗能力的强活性放线菌菌株,并从菌株中发现新的杀线虫活性化合物,从海南东寨港红树林采集海泥样品9份,从五指山原始森林等地采集土壤样品51份,用平板稀释法对海泥和土壤样品进行分离;以南方根结线虫2龄幼虫为靶标线虫,采用24孔细胞培养板液体线虫法进行初筛和复筛;根据形态特征、培养特征、生理生化特征和16S rDNA序列对复筛出的活性菌株进行鉴定;菌株发酵液经溶媒萃取、硅胶柱层析、Sephadex LH 20凝胶过滤和制备薄层板层析,采用活性跟踪法从中分离纯化杀线虫活性化合物;化合物经光谱及波谱分析和文献对照,进行结构鉴定。从60份样品中分离得到356株菌落形态有差异的放线菌。初筛得到16株对根结线虫校正死亡率在80%以上的菌株,复筛获得3株线虫校正死亡率在95%以上的菌株,其中分离自海泥样品中的菌株HA10002抗线虫活性最强,发酵原液的校正死亡率达100%。HA10002经鉴定为白浅灰链霉菌,从其发酵液中分离获得2个活性化合物,其中A26 3为Nocardamine,A22 1的结构正在进一步鉴定中。上述结果表明,筛选出的放线菌HA10002能合成2种以上杀根结线虫的活性代谢产物,是一株遗传稳定且具有开发潜力的活性菌株。     

云南榧内生放线菌FTY2的分子鉴定及其抑菌活性

为探明菌株FTY2的分类地位及其发酵液的抑菌活性,采用改进的CTAB法和抑制菌丝生长速率法对从云南榧新鲜茎叶上分离得到的1株内生放线菌FTY2进行分子鉴定及其发酵液的抑菌活性研究。结果表明:FTY2初步鉴定为链霉菌属(Streptomyces sp.)放线菌,其发酵液对小麦雪腐病菌、油菜菌核病菌、淡色生赤壳菌、腐皮镰刀菌、尖孢炭疽菌和水稻稻瘟病菌等6株植物病原真菌的EC50分别为5.90mL/L、9.48mL/L、11.56mL/L、227.19mL/L、12.35mL/L和61.87mL/L;在121℃下处理30min后,对尖孢炭疽菌的抑菌活性开始大幅下降,抑制率从93.79%(4℃)降至26.73%(121℃);不同pH处理发酵液的抑菌率基本不变,均达92%以上。     

广谱拮抗放线菌C28的鉴定及其对甜瓜蔓枯病的防治效果

【目的】研究放线菌C28对12种植物病原真菌的抑菌作用及对盆栽甜瓜蔓枯病的防治效果,并对该放线菌进行分类鉴定。【方法】采用琼脂块法、生长速率法研究放线菌C28对靶标病原真菌的抑菌作用;通过盆栽试验研究C28对甜瓜蔓枯病的防治效果;根据形态特征、生理生化特性及16S rDNA序列分析确定C28的分类地位。【结果】①放线菌C28对供试病原真菌具有一定的广谱拮抗性,拮抗圈直径为10.0～22.5 mm;其无菌发酵滤液对病原真菌菌丝生长具有明显的抑制作用,无菌发酵滤液原液对木贼镰刀菌（Fusarium equiseti）、层出镰刀菌（F.proliferatum）及葡萄座腔菌（Botryosphaeria dothidea）的抑菌率分别高达95.0%,90.0%及93.1%。②用放线菌C28无菌发酵滤液稀释10⁴倍处理甜瓜种子后,甜瓜胚轴、胚根长度较对照（无菌水处理）增加37.1%和12.5%;种子简明活力指数高达141.7,与对照差异显著（P<0.05）。③用C28无菌发酵滤液原液喷施处理后,甜瓜蔓枯病病情指数较对照显著下降（P<0.05）,预防和治疗效果分别为42.4%和40.0%。④根据形态特征、生理生化特性及16S rDNA序列分析,将放线菌C28鉴定为球孢链霉菌球孢亚种（Streptomyces globisporus subsp.globisporus）。【结论】球孢链霉菌球孢亚种C28对多种病原真菌具有广谱拮抗性,对甜瓜蔓枯病具有良好的抑菌和生防效果,对瓜类种子萌发和生长具有一定的促进作用。     

Isolation,Characterization, and Bioactivity Evaluation of 3-((6-Methylpyrazin-2-yl)methyl)-1H-indole,a New Alkaloid from a Deep-Sea-Derived Actinomycete Serinicoccus profundi sp. nov

One new alkaloid, 3-((6-methylpyrazin-2-yl)methyl)-1H-indole (1) was obtained from the deep-sea actinomycete Serinicoccus profundi sp. nov., along with five known compounds (2–6). Their structures were determined on the basis of detailed analysis of the 1D and 2D NMR as well as MS data. The new indole alkaloid displayed weak antimicrobial activity against Staphylococcus aureus ATCC 25923 with an MIC value of 96 μg/mL. It showed no cytotoxicity on a normal human liver cell line (BEL7402) and a human liver tumor cell line (HL-7702).     

海洋弗氏链霉菌HNM0089抗真菌活性成分研究

为了从海洋微生物中寻找农药先导化合物,本研究通过16S rRNA基因序列分析对具有抗真菌活性的海洋放线菌HNM0089的种属进行鉴定,并对其抗真菌的活性成分进行研究。结果表明:海洋放线菌HNM0089被鉴定为弗氏链霉菌(Streptomyces fradiae)。利用高分辨质谱、一维和二维核磁波谱技术,将其主要活性成分鉴定为星形孢菌素(Staurosporine)。该化合物对芒果炭疽病菌、水稻稻瘟病菌、香蕉枯萎病菌、薯蓣炭疽病菌和橡胶炭疽病菌均有抑制活性,具有开发成农用抗菌素的潜力。