几种绢丝昆虫遗传多样性的RAPD研究

选用重复性较好的 10个引物对 6种绢丝昆虫 2 3个个体进行扩增 ,共得到 2 45个RAPD标记。RAPD分析结果表明 :家蚕及野桑蚕种内各品种材料的遗传距离较大 ,天蚕、蓖麻蚕及柞蚕较小 ;家蚕与野桑蚕两者之间遗传距离小 ,反映出家蚕和野桑蚕亲缘关系较近 ;而天蚕、蓖麻蚕和柞蚕三者之间以及分别与家蚕和野桑蚕之间的遗传距离较大 ,亲缘关系远。聚类分析的结果与之相同。并且对家蚕的起源及绢丝昆虫遗传多样性的保护利用做了探讨。     

我国部分地区ＮＤＶ的分子流行病学研究

本研究根据新城疫病毒（ＮＤＶ）Ｆ基因编码区１－３７４位核苷酸序列计算其遗传距离并给出了ＮＤＶ的系统发育进化树，将６８株ＮＤＶ分为９个基因型（３０株为国内分离株），其中Ⅰ－Ⅵ是早已存在的老基因型，Ⅶ、Ⅷ、Ⅸ为新发现的基因型，特别是Ⅸ为我国特有的基因型（Ｆ４８ＥＯ、Ｍ３、ＨＬＪ－３、ＨeB-1P和ＮＭ－５）。１９９７－１９９９年我国云南、广西、甘肃、陕西、新疆等地分离的ＹＮ－１Ｐ、ＧＸ－３、Ｈ１、Ｈ２、Ｐ１、ＧＸ－１、ＧＸ－２、ＧＳ－３、ＳＨＸ－２、ＳＨＸ－３、ＳＨＸ－６、ＳＨＸ－７、ＸＪ－２和１９９１年分离的ＨuB-1均属于Ⅶ基因型，该基因型的病毒是９０年以来引起新城疫发生的主要病原。根据遗传距离和分离年代可将此基因型进一步划分为５个基因亚型，分别是Ⅶa、Ⅶb、Ⅶc、Ⅶd和Ⅶe。此外ＨuN-1/98、HLJ-4/95和ＨeH-1P属一个老的基因Ⅵ，１９７９－１９８５年分离自青海的ＱＨ－１、ＱＨ－２、ＱＨ－４属于一个新的基因型－Ⅷ型。可见在我国新城疫的流行是极其复杂的，既有老基因型的危害（Ⅰ－Ⅵ），又有新基因型（Ⅶ）的流行，更有我国独特Ⅷ和Ⅸ基因潜伏。     

阿魏蘑、白灵菇及杏鲍菇亲缘关系的研究

利用PCR产物克隆测序测定了阿魏蘑、白灵菇与杏鲍菇rDNA内转录间隔区(ITS)的序列,并对所测序列进行分析.结果表明,阿魏蘑、白灵菇和杏鲍菇三者之间具有较近的亲缘关系,白灵菇与杏鲍菇具有非常近的亲缘关系,但阿魏蘑、白灵菇和杏鲍菇为3个不同的种.     

鸭流感病毒4/2004-H6N2亚型毒株的血凝素基因全序列克隆与分析

2004初从正常鸭群中分离到一株鸭源禽流感病毒，命名为A／Duck／HN／4／2004(H6N2)。经对血凝素基因(HA)序列分析发现HA基因全长为1744bp，共编码566个氨基酸，在裂解位点仅含一个碱性氨基酸-精氨酸(R)，符合LPAIV的标准。将所得基因序列与已发表的同一亚型参考序列分析表明，与H6亚型流感HA基因同源性为89．2％-97．1％，经分子遗传演化分析表明本次分离株与香港分离株A／Duck／Hong Kong／3600／99(H6N2)、A／Duck／Hong Kong／3600／99(H6N2)最近。     

我国部分地区猪繁殖与呼吸综合征病毒分离株ORF5基因的遗传变异分析

参考Genbank发表的猪繁殖与呼吸综合征病毒（PKRSV）ATCC VR-2332的ORF5基因序列，设计并合成了一对引物．对来自福建、浙江、山东等地的PRRSV分离毒株进行RT-PCR扩增．获得约748bp的DNA片断，将其分别克隆入pMD18-T载体中，并进行测序。应用DNAStar软件分析所测序列，并与ATCCVR-2332、CH-1a、MLV、Lv等毒株的ORF5序列进行比较，结果表明：SHDl与F114、MLV、ATCCVR-2332同源性高达98．5％，与CH-1a同源性为91．0％，与其它毒株同源性为86．6％~88．4％；F114与MLV、ATCCVR-2332同源性为99．3％～99．7％．其余分离毒株在遗传关系上和CH-1a又分为明显的两个群．显示近年来各地PRRSV分离毒株与cH-1a株的遗传差异越来越大。     

Prevalence,molecular characterization and risk factor analysis of Ehrlichia canis and Anaplasma platys in domestic dogs from Paraguay

This is the first study to investigate the prevalence and risk factors associated with Ehrlichia canis and Anaplasma platys positivity in dogs from Paraguay. Conventional PCR assays for the E. canis 16SrRNA gene and A. platys p44 gene were carried out in blood samples from 384 dogs from Asunción city, Paraguay. Sequencing and phylogenetic analysis were performed in selected positive E. canis and (16SrRNA gene) and A. platys (16S and p44 genes) samples. The overall prevalence of E. canis and A. platys in dogs in Paraguay was 10.41% (40/384) and 10.67% (41/384), respectively. Older dogs without veterinary care had higher odds for E. canis positivity and a higher number of dogs in the same household, as well as absence of anti-tick treatment were considered risk factors for A. platys. Ehrlichia canis and A. platys circulate in the dog population from Asunción, and are described for the first time in Paraguay.     

Seroprevalence,associated risk factors analysis and first molecular characterization of chlamydia abortus among Egyptian sheep

Chlamydia abortus is one of the most common abortive agents worldwide in sheep. Few studies have been reported C. abortus infection among sheep in Egypt but the available data is scarce. The objective of the present study was to determine the seroprevalence of C. abortus among sheep, the associated risk factors and its molecular characterization. The present study was conducted on 675 sheep in six Governorates at Northern Egypt. Data analysis confirmed the presence of antibodies against C. abortus in 93 out of 675 sheep. The logistic regression model was fitted to identify the associated risk factors with C. abortus infection. The results revealed that C. abortus increased significantly in ewes (OR = 4.04, 95 %CI: 1.44−11.28) during autumn season (OR = 3.6, 95 %CI: 1.64–8.28), in ewes with a history of abortion (OR = 1.4, 95 %CI: 0.87–2.50) and in farm where no lambing pen (OR = 2.2, 95 %CI: 1.30–3.94) or abscence of post abortion measures (OR = 1.96, 95%CI: 1.23-3.12). In addition, age, flock size and exchange of breeding ram had no significant effect on prevalence of chlamydiosis. Also, PCR assay was confirmed presence of C. abortus as accusative pathogen in aborted ewe and the genetic characterization of Egyptian C. abortus strain revealed 100 % identity with another strain from Iraq. A control program should be applied to reduce economic losses and risk of human infection.     

Phylogenetic relationships in Origanum spp. based on rDNA sequences and intra-genetic variation of Greek O. vulgare subsp. hirtum revealed by RAPD

Origanum species are among the most widely spread herbs in the Mediterranean basin. Eventhough they are used as a spice, evaluation of their genetic diversity and evolution has only recently drawn attention. In order to study phylogenetic relationships, 14 ITS1-5.8S-ITS2 clones belonging to the most common Origanum species were sequenced and a parsimony tree was constructed, using the approximate likelihood ratio test. All Origanum species were clearly separated from allied genera of the Mentheae tribe while a clear distinction between the Greek and the Spanish accessions was revealed. In addition the germplasm variability of the most common Greek oregano (O. vulgare subsp. hirtum) was investigated using the RAPD markers. The use of 10 random decamers resulted in 133 unambiguous and reproducible bands detected across 27 entries. Two main groups were identified by the UPGMA clustering using Jaccard's similarity coefficient, and major genetic dissimilarities among Greek O. vulgare subsp. hirtum populations and O. onites/O. virens species were detected. Analysis of molecular variance revealed that genetic variability is distributed mainly within populations; however, significant Φ_st values were detected between different geographical localities, supporting noteworthy genetic differentiation among O. vulgare subsp. hirtum populations.     

糖化酶工业株的鉴定及糖化酶基因的克隆

对4种糖化酶工业株的rDNA片段进行克隆,在对比其rDNA-ITS1序列与GenBank数据库的基础上,结合形态学观察对菌株进行了鉴定。结果显示,4种菌株分别为黑曲霉、无花果曲霉、米曲霉和灰色小克银汉霉。通过Me-gAlign得到的进化树表明,前3种菌株亲缘关系较近,三者与灰色小克银汉霉的亲缘关系较远。进一步克隆了黑曲霉、无花果曲霉和米曲霉的糖化酶基因,并在毕赤酵母中实现了分泌表达。     

叶甲科部分种类 Cyt b基因序列及系统发育关系初探

测定分析了叶甲科(Chrysomelidae)15种昆虫mtDNA_Cyt b基因部分序列,结果显示,在获得的390 bp序列中,198个核苷酸位点为多态性位点(约占50.8%),序列间碱基差异平均值为18.9%,A T含量为72.7%,碱基转换呈现明显的TC偏向性,颠换主要以TA为主,转换/颠换(R)值为0.8。依据分子数据建立了该15种昆虫的系统发育关系,结果表明:跳甲亚科(Alticinae)和叶甲亚科(Chrysomelinae)的亲缘关系较近,萤叶甲亚科(Galerucinae)与前两者的关系较远。萤叶甲亚科中瓢萤叶甲为最早分化的类群,长跗萤叶甲属(Monolepta)、凹翅萤叶甲属(Paleosepharia)、长刺萤叶甲属(Atrachya)能形成姊妹群。克萤叶甲属(Cneorane)和守瓜属(Aulacophora)的亲缘关系较近。基于蛋白质序列构建的系统树的置信值高于核苷酸序列建立的系统发育树。