Genetic diversity,anti‐microbial resistance,plasmid profile and frequency of the Vi antigen in Salmonella Dublin strains isolated in Brazil

Salmonella Dublin is strongly adapted to cattle causing enteritis and/or systemic disease with high rates of mortality. However, it can be sporadically isolated from humans, usually causing serious disease, especially in patients with underlying chronic diseases. The aim of this study was to molecularly type S. Dublin strains isolated from humans and animals in Brazil to verify the diversity of these strains as well as to ascertain possible differences between strains isolated from humans and animals. Moreover, the presence of the capsular antigen Vi and the plasmid profile was characterized in addition to the anti‐microbial resistance against 15 drugs. For this reason, 113 S. Dublin strains isolated between 1983 and 2016 from humans (83) and animals (30) in Brazil were typed by PFGE and MLVA. The presence of the capsular antigen Vi was verified by PCR, and the phenotypic expression of the capsular antigen was determined serologically. Also, a plasmid analysis for each strain was carried out. The strains studied were divided into 35 different PFGE types and 89 MLVA‐types with a similarity of ≥80% and ≥17.5%, respectively. The plasmid sizes found ranged from 2 to >150 kb and none of the strains studied presented the capsular antigen Vi. Resistance or intermediate resistance was found in 23 strains (20.3%) that were resistant to ampicillin, ciprofloxacin, chloramphenicol, imipenem, nalidixic acid, piperacillin, streptomycin and/or tetracycline. The majority of the S. Dublin strains studied and isolated over a 33‐year period may descend from a common subtype that has been contaminating humans and animals in Brazil and able to cause invasive disease even in the absence of the capsular antigen. The higher diversity of resistance phenotypes in human isolates, as compared with animal strains, may be a reflection of the different anti‐microbial treatments used to control S. Dublin infections in humans in Brazil.     

2000-2017年中国农村水资源贫困与经济贫困的耦合协调状态及其影响因素

[目的] 测算中国农村水资源贫困指数和经济贫困指数的耦合度和耦合协调度,为减轻农村水贫困与经济贫困提供理论依据和政策启示。[方法] 以中国31个省（市、区）为研究对象,运用层次分析法、熵值法、系统耦合协调度模型、空间杜宾面板数据模型等方法,研究了2000—2017年农村水资源贫困与经济贫困耦合协调度的时空分布特征和影响因素。[结果] ①从整体来看,虽然中国农村水资源贫困与经济贫困的耦合协调度不高,但大致呈上升趋势,且中国31个省（市、区）均表现为耦合度大于耦合协调度。②就空间角度而言,中国农村水资源贫困与经济贫困的耦合协调度呈现由东南部向东北、西南部扩散的态势,东部沿海地区的江苏和浙江、南部沿海地区的福建与广东、地处长江中游地带的湖南省的耦合协调度最高。③农村水资源贫困与农村经济贫困耦合协调程度存在明显的负向溢出效应。财政农林水事务支出对农业生产具有较大的促进作用,而农产品价格和第二、三产业比例提高会抑制其发展。[结论] 国家应加大或维持对农村原有的财政支持力度,充分发挥政府和市场在资源配置中的调节作用。合理调整农产品价格的同时,加大农业技术投入,加强地区间分工合作,促进产业升级,从而推保农村水资源与农村经济协调发展。     

Pathogen translocation and histopathological lesions in an experimental model of Salmonella Dublin infection in calves receiving lactic acid bacteria and lactose supplements

The purpose of this study was to evaluate the capacity of a lactic acid bacteria (LAB) inoculum to protect calves with or without lactose supplements against Salmonella Dublin infection by evaluating histopathological lesions and pathogen translocation. Fifteen calves were divided into three groups [control group (C-G), a group inoculated with LAB (LAB-G), and a group inoculated with LAB and given lactose supplements (L-LAB-G)] with five, six, and four animals, respectively. The inoculum, composed of Lactobacillus (L.) casei DSPV 318T, L. salivarius DSPV 315T, and Pediococcus acidilactici DSPV 006T, was administered with milk replacer. The LAB-G and L-LAB-G received a daily dose of 10⁹ CFU/kg body weight of each strain throughout the experiment. Lactose was provided to the L-LAB-G in doses of 100 g/day. Salmonella Dublin (2 × 10¹⁰ CFU) was orally administered to all animals on day 11 of the experiment. The microscopic lesion index values in target organs were 83%, 70%, and 64.3% (p < 0.05) for the C-G, LAB-G, and L-LAB-G, respectively. Administration of the probiotic inoculum was not fully effective against infection caused by Salmonella. Although probiotic treatment was unable to delay the arrival of pathogen to target organs, it was evident that the inoculum altered the response of animals against pathogen infection.     

Factors associated with variation in bulk-tank-milk Salmonella Dublin ELISA ODC% in dairy herds

Our objective was to determine factors that contribute to variation in bulk-tank-milk Salmonella Dublin enzyme-linked immunosorbent assays (ELISA) corrected optic-density measurements (ODC%) in dairy herds. We constructed hierarchical mixed models with repeated bulk-tank-milk ELISA ODC% in 31 Danish dairy herds. Four models included different combinations of explanatory factors, and we compared how well these models described the variation in the data. Herd was included as a random effect nested within Salmonella status and barn type.

Detection of Salmonella Dublin or Salmonella Typhimurium by bacteriological culture of individual faecal samples or of slurry samples was associated with higher bulk-tank-milk ELISA ODC%, as was apparent Salmonella prevalence, the mean ELISA ODC% or mean-yield-corrected ELISA ODC% in milk samples collected from all individual cows. However, combinations of risk factors that included number or prevalence of cows with a very high ELISA ODC% provided better models, indicating that the effect of the cow-level explanatory variables on the bulk-tank-milk ELISA ODC% was related to the activity of the infection in the herd. Barn type (loose housing or tie stalls) was not associated with the variation in bulk-tank-milk ELISA ODC% in these models, which might be useful in planning of surveillance programs and intervention strategies.     

都柏林核心元数据集在国外图书馆的应用研究

本文从分析国外图书馆界比较流行的、普遍使用的都柏林元数据的基本结构和优点着手,研究了英语国家和非英语国家在都柏林元数据应用的具体做法,并指出了其在应用中的局限性。     

Review of pathogenesis and diagnostic methods of immediate relevance for epidemiology and control of Salmonella Dublin in cattle

Salmonella enterica subsp. enterica serovar Dublin (S. Dublin) receives increasing attention in cattle production. It is host-adapted to cattle, and leads to unacceptable levels of morbidity, mortality and production losses in both newly and persistently infected herds. Cattle health promoting institutions in several countries are currently constructing active surveillance programmes or voluntary certification programmes, and encourage control and eradication of S. Dublin infected cattle herds. There is a need to understand the underlying pathogenesis of the infection at both animal and herd level to design successful programmes. Furthermore, knowledge about and access to diagnostic tests for use in practice including information about test accuracy and interpretation of available diagnostic test methods are requested.     

The range of influence between cattle herds is of importance for the local spread of Salmonella Dublin in Denmark

The objective of the study was to estimate the range of influence between cattle herds with positive Salmonella Dublin herd status. Herd status was a binary outcome of high/low antibody levels to Salmonella Dublin in bulk-tank milk and blood samples collected from all cattle herds in Denmark for surveillance purposes. Two methods were used. Initially, a spatial generalised linear mixed model was developed with an exponential correlation function to estimate the range of influence simultaneously with the effect of potential risk factors. An iteratively reweighted generalised least squares procedure was used as a second method for verifying the range of influence estimates. With this iterative procedure, deviance residuals were calculated based on a generalised linear model and the range of influence was estimated based on the residuals using an exponential semivariogram. The range of influence was estimated for six different regions in Denmark using both methods. The analyses were performed on data collected during 1 year after initiation of the Salmonella Dublin surveillance program providing herd classifications for the 4th year-quarter of 2003 and 2 years later for the 4th year-quarter of 2005. The prevalence of dairy herds with a positive Salmonella Dublin herd classification status in this period had decreased from 22.1 to 17.0%. In non-dairy herds, the prevalence was nearly unchanged during the same period (3.4 and 3.7% in 4th quarter of 2003 and 2005, respectively). For all cattle herds, the range of influence was 2.3–6.4 km in 2003 and 1.5–8.3 km in 2005. There seemed to be no association between the range of influence and the density of herds in the different regions.     

DC元数据在数字图书馆中的应用

 

从元数据的概念入手，介绍了DC元数据的产生和发展，体系结构及其在电子资

源描述中的优势等，并从五个方面介绍了DC元数据在数字图书馆中的应用，包括信息资源的

组织，解决系统互操作问题，为用户实现知识导航，用户管理，数据库的设计与维护。

     

网络信息资源的Dublin Core元数据编目

讨论了用DC元数据对网络信息资源的编目问题,以及与MARC格式的关联。     

Whole‐genome sequencing reveals resistome of highly drug‐resistant retail meat and human Salmonella Dublin

Non‐typhoidal Salmonella (NTS) are a significant source of foodborne illness worldwide, with disease symptoms most often presenting as self‐limiting gastroenteritis; however, occasionally the infection spreads and becomes invasive, frequently requiring anti‐microbial treatment. The cattle‐adapted Dublin serovar of NTS has commonly been associated with invasive illness and anti‐microbial resistance (AMR). Here, the enhanced resolution conferred by whole‐genome sequencing was utilized to elucidate and compare the resistome and genetic relatedness of 14 multidrug‐resistant (MDR) and one pan‐susceptible S. Dublin, isolated primarily in Pennsylvania, from fresh retail meat (one isolate) and humans (14 isolates). Twelve different genetic AMR determinants, including both acquired and chromosomal, were identified. Furthermore, comparative plasmid analysis indicated that AMR was primarily conferred by a putative IncA/C2 plasmid. A single pan‐susceptible S. Dublin isolate, collected from the same timeframe and geographical region as the MDR isolates, did not carry an IncA/C2 replicon sequence within its genome. Moreover, the pan‐susceptible isolate was genetically distinct from its MDR counterparts, as it was separated by ≥267 single nucleotide polymorphisms (SNPs), whereas there was a ≤38 SNP distance between the MDR isolates. Collectively, this data set advances our understanding of the genetic basis of the highly drug‐resistant nature of S. Dublin, a serovar with significant public health implications.