Fatty acid, triacylglycerol, phytosterol, and tocopherol variations in kernel oil of Malatya apricots from Turkey

The fatty acid, sn-2 fatty acid, triacyglycerol (TAG), tocopherol, and phytosterol compositions of kernel oils obtained from nine apricot varieties grown in the Malatya region of Turkey were determined ( P<0.05). The names of the apricot varieties were Alyanak (ALY), Cataloglu (CAT), C?loglu (COL), Hacihaliloglu (HAC), Hacikiz (HKI), Hasanbey (HSB), Kabaasi (KAB), Soganci (SOG), and Tokaloglu (TOK). The total oil contents of apricot kernels ranged from 40.23 to 53.19%. Oleic acid contributed 70.83% to the total fatty acids, followed by linoleic (21.96%), palmitic (4.92%), and stearic (1.21%) acids. The s n-2 position is mainly occupied with oleic acid (63.54%), linoleic acid (35.0%), and palmitic acid (0.96%). Eight TAG species were identified: LLL, OLL, PLL, OOL+POL, OOO+POO, and SOO (where P, palmitoyl; S, stearoyl; O, oleoyl; and L, linoleoyl), among which mainly OOO+POO contributed to 48.64% of the total, followed by OOL+POL at 32.63% and OLL at 14.33%. Four tocopherol and six phytosterol isomers were identified and quantified; among these, gamma-tocopherol (475.11 mg/kg of oil) and beta-sitosterol (273.67 mg/100 g of oil) were predominant. Principal component analysis (PCA) was applied to the data from lipid components of apricot kernel oil in order to explore the distribution of the apricot variety according to their kernel's lipid components. PCA separated some varieties including ALY, COL, KAB, CAT, SOG, and HSB in one group and varieties TOK, HAC, and HKI in another group based on their lipid components of apricot kernel oil. So, in the present study, PCA was found to be a powerful tool for classification of the samples.     

Arsenic in Human and Cow's Milk: a Reflection of Environmental Pollution

Arsenic, an environmental pollutant, is present in minute but invariable amounts in food, drinking water and ambient air. Izmir is founded on a land of long extinct volcanoes, with vast areas of lava ground suitable for agriculture. It is located at close vicinity to high thermal activity, e.g., hot springs and thermal baths. In the present study, total arsenic level in breast milk was assessed in randomly chosen 35 lactating women of different socioeconomic levels who live downtown in Izmir and in milk of 36 cows grazing on shoulder grass of highways with heavy traffic. Total arsenic was assessed on an atomic absorption spectrophotometer (AA-680 Shimadzu). Mean (± SEM) arsenic was found to be 4.219 ± 0.079 µg L^-1 in breast milk, and 4.932 ± 0.38 µg L^-1 in cow's milk. Conclusion: in Izmir, arsenic contamination of breast milk was not found so as to be considered noxious for suckling infants, whereas was found relatively higher in cow's milk. It would be prudent to remember breast and cow's milk arsenic contamination in breast fed or milk fed babies living in areas with higher thermal activity or in regions where ground water is with high arsenic content.     

Proteome profiling of the compatible interaction between wheat and stripe rust

Over the last decade, comparative molecular profiling studies between compatible and incompatible plant-pathogen interactions have shown that susceptible response of the host to a pathogen requires factors that promote disease development. In this study, we examined proteome profiles during a compatible interaction between wheat and stripe rust. A 2D-LC system (ProteomeLab PF2D) was used for protein separation and to compare the proteome from infected and control samples. More than 700 protein peaks at each time point were compared between pathogen- and mock-inoculated samples. Selected proteins, with significant differences in abundance were identified by nanoLC-ESI- MS/MS and generated spectra were searched against the wheat protein databases from UniProt, and NCBI and the Puccinia database from The Broad Institute. In total, the identified proteins comprised of 62 % wheat and 38 % Pst proteins. All identified proteins were searched by bioinformatics-based algorithms to detect their subcellular localization and signal peptide motifs which have the potential to catch the candidate effector proteins. The wheat proteins were classified based on their function. Although a compatible interaction, many wheat proteins, such as antioxidants, PRs and cold-responsive proteins, are implicated in defense and stress tolerance. On the pathogen side, 64 proteins were identified, and included some important pathogenicity proteins that can play role in pathogen virulence and suppress the host defense. In addition, we discovered that nine proteins have a signal sequence and three of the hypothetical fungal proteins, PGTG_11681T0, PGTG_07231T0 and CBH50687.1, have been tentatively identified as candidate effectors.     

Adaptation of endemic mediterranean Sternbergia candida Mathew Et T. Baytop in the continental climate of central anatolia

Sternbergia candida is an important endemic bulbous plant with beautiful white flowers. It grows on the rock slopes of Baba mountains under Lebanon Cedars in the Mugla province of Turkey with Mediterranean climate. The plant is vulnerable and endangered due to illegal collection for local and foreign flower industry. Fast developing tourism industry and rapid urbanization has also shown negative implications on its population. The study reports three years successful adaptation results of S. candida in the continental climate of Ankara in the Central Anatolia. Four groups of bulbs based on diameter (>2.45, 2.15–2.44, 1.85–2.14 and <1.84 cm) were collected from its natural habitat during March, April and May 1998 and were evaluated for frequency (%) of emergence, mean number of leaves per plant, mean plant height, frequency (%) of flowering, frequency (%) of fruit setting. mean number of bulbs per plant, and mean diameter (cm) of regenerated bulbs. All categories of bulbs could be multiplied and adapted successfully with variable frequency of fruit setting. However, the highest fruit set was recorded from 2.15–2.44 cm April collected bulbs. This indicated that the bulb diameter and collection time had clear implications on multiplication, propagation and adaptation of the plant.     

Ozone concentrations at a rural mountain site of Northwestern Turkey

Average ozone concentrations at a remote site in the Uludag Mountain of Northwestern Turkey was 29 ppb for a 12 month period. Only 11% of the time 1-h average values exceed 50 ppb. The US Air Quality Standard of 0.12 ppm was not exceeded. The diurnal variations of O₃ and NO₂ were 27 and 2.3 ppb respectively, during summer 1993, indicating the impact of urban and industrial sources. Highest O₃ concentrations were observed under southerly and northerly winds, suggestive of the transport of photochemically produced oxidants from Bursa city and industries and a power plant located downwind of the sampling site.     

Morphological and molecular evaluation of Turkish rice (Oryza sativa L.) landraces

Genetic Resources and Crop Evolution - This study was carried out to evaluate Turkish rice landraces, in 2016 and 2017. Twenty-nine morphological traits were used for morphological evolution and 10...     

Responses of some different pepper (Capsicum annuum L.) genotypes to inoculation with two different arbuscular mycorrhizal fungi

Eight different pepper genotypes inoculated by two different arbuscular mycorrhizal fungi (AMF) [Glomus intraradices (Gi) and Gigaspora margarita (Gm)] in a growth chamber experiment under normal seedling growing conditions were evaluated for seedling traits, colonization and relative mycorrhizal dependency (RMD). In general, inoculated plants had greater dry weights compared to non-inoculated plants. Five cultivars responded positively to inoculation with AM fungi and three responded negatively. A great variation in mycorrhizal colonization dependency was observed among the pepper genotypes, with the N52 genotype showing the highest RMD and the Karaisali genotype the lowest. RMD and dry weights of pepper genotypes were inversely correlated.     

The effect of Arbuscular Mycorrhizal Fungi (AMF) applications on the silage maize (Zea mays L.) yield in different irrigation regimes

In this study the effect of AMF (Arbuscular Mycorrhizal Fungi) Glomus intraradices on the silage yield of maize (Zea mays L.) under five different irrigation regimes was studied. Plant height, green herbage yield, dry matter yield, leaf, stem and ear ratios were evaluated as yield criteria in the study. It was found that AMF inoculation increased the silage yield in the whole irrigation when compared to those which were not applied with AMF. In addition, it was particularly established that AMF application brought about significant increase even in restricted irrigation conditions in green and dry matter yield. It was also realised that, with AMF application, there was an increase in leaf and stem ratios but a decrease in ear ratios.     

Maedi-visna virus infection in Karayaka and Amasya Herik breed sheep from provinces in northern Turkey

Maedi-visna is an important virus infection of sheep having prolonged incubation period (slow disease) and reflecting two distinct forms clinically and pathologically. In this study, the presence of MVV was investigated serologically in 58 Amasya Herik sheep breed and 525 Karayaka sheep breed. Seropositivity rates in Amasya Herik sheep breed and Karayaka sheep breed were detected as 69.0% and 18.5%, respectively. MVV antibodies were found in 137 of 583 serum samples (23.5%). Positivity rates for the provinces varied and were as follows: Samsun 19.4%, Sinop 15.4%, Ordu 25.8%, Trabzon 26.7%, Rize 36.7%, Amasya 69.0% and Tokat 35.0%, however no antibody response was detected in all of the sheep in Giresun province.