Soil organic carbon allocation and dynamics under perennial energy crops and their feedbacks with soil microbial biomass and activity

The cultivation of perennial instead of annual energy crops has received growing interest. Previous studies identified numerous beneficial effects of perennial energy crop (PEC) cultivation for the agricultural landscape such as promotion of agrobiodiversity, reduced requirements for agrochemicals and fertilizers as well as a large potential for carbon accumulation in soil. However, the mere presence of soil organic matter (SOM) accumulation gives no indication about the persistence of the SOM for example after a recultivation of the stands. Therefore, this study focused on SOM pools of different density fractions and soil microbial parameters. Six different PECs were tested against a typical benchmark system as feedstock for anaerobic digestion. The study has shown that all PEC species increased soil microbial activity and provided an insight how they sequester carbon in soil. Moreover, significant modifications in basic soil properties caused by plant growth were observed. For example, the cultivation of giant knotweed has lowered the soil pH by more than 0.5 pH units compared to the benchmark system. After 5 years of PEC cultivation, total soil organic carbon stocks were increased between 1,500 ± 400 and 4,500 ± 1,500 kg C ha^-1 for the upper 10 centimetres of soil. The distribution among different soil fractions showed species-specific patterns. Tall wheatgrass and Virginia mallow showed particular high accumulation rates in the mineral-associated SOM fraction which indicates long residence times of the SOM after a possible recultivation of the fields.     

Investigation of a possible chain of Streptococcus suis infection in a pig breeding community using PCR-based genotyping

Streptococcus (S.) suis plays an important role in pig breeding causing invasive diseases such as meningitis and polyarthritis. Herd problems with Streptococcus suis are common in many pig farms and are frequently characterised by disease outbreaks. In this context, it is often important to identify chains of infection, e.g. between a farrow-to-wean and a grower farm. In the following case report a possible chain of infection among the different farms of a farrow-to-finish system was investigated. In two grower units herd problems with S. suis were present; the mortality was higher than 5 %. It appeared likely, that the streptococci causing these problems were transmitted from a single farrow-to-wean unit to the two different grower farms. In the respective farms swabs were taken from different healthy animals and, in the case of the grower farms, also from the infected animals. Genotypic profiling of strains by a multiplex-PCR and AFLP typing method revealed that two different S. suis pathotypes were responsible for the herd problems. Both pathotypes could not be detected in the farrow-to-wean farm.Thus, a chain of infection originating from the farrow-to-wean farm appeared unlikely. The multiplex PCR was in this case sufficient to elucidate the described problem.     

Conversion of a tropical forest into agroforest alters the fine root-related carbon flux to the soil

Large areas of remaining tropical forests are affected by anthropogenic disturbances of various intensities. These disturbances alter the structure of the forest ecosystem and consequently its carbon budget. We analysed the role of fine root dynamics in the soil carbon budget of tropical moist forests in South-east Asia along a gradient of increasing disturbance intensity. Fine root production, fine root turnover, and the associated carbon fluxes from the fine root system to the soil were estimated with three different approaches in five stands ranging from an old growth forest with negligible anthropogenic disturbance to a cacao agroforestry system with planted shade trees. Annual fine root production and mortality in three natural forest sites with increasing canopy openness decreased continuously with increasing forest disturbance, with a reduction of more than 45% between the undisturbed forest and the forest with large timber extraction. Cacao agroforestry stands had higher fine root production and mortality rates than forest with large timber extraction but less than undisturbed forest. The amount of carbon annually transferred to the soil carbon pool through fine root mortality was highest in the undisturbed forest and generally decreased with increasing forest use intensity. However, root-related C flux was also relatively high in the plantation with planted shading trees. In contrast, the relative importance of C transfer from root death in the total above- and below-ground C input to the soil increased with increasing forest use intensity and was even similar to the C input via leaf litter fall in the more intensively managed agroforest. We conclude that moderate to heavy disturbance in South-east Asian tropical moist forests has a profound impact on fine root turnover and the related carbon transfer to the soil.     

Effects of biochar compared to organic and inorganic fertilizers on soil quality and plant growth in a greenhouse experiment

Our contemporary society is struggling with soil degradation due to overuse and climate change. Pre‐Columbian people left behind sustainably fertile soils rich in organic matter and nutrients well known as terra preta (de Indio) by adding charred residues (biochar) together with organic and inorganic wastes such as excrements and household garbage being a model for sustainable agriculture today. This is the reason why new studies on biochar effects on ecosystem services rapidly emerge. Beneficial effects of biochar amendment on plant growth, soil nutrient content, and C storage were repeatedly observed although a number of negative effects were reported, too. In addition, there is no consensus on benefits of biochar when combined with fertilizers. Therefore, the objective of this study was to test whether biochar effects on soil quality and plant growth could be improved by addition of mineral and organic fertilizers. For this purpose, two growth periods of oat (Avena sativa L.) were studied under tropical conditions (26°C and 2600 mm annual rainfall) on an infertile sandy soil in the greenhouse in fivefold replication. Treatments comprised control (only water), mineral fertilizer (111.5 kg N ha^–1, 111.5 kg P ha^–1, and 82.9 kg K ha^–1), compost (5% by weight), biochar (5% by weight), and combinations of biochar (5% by weight) plus mineral fertilizer (111.5 kg N ha^–1, 111.5 kg P ha^–1, and 82.9 kg K ha^–1), and biochar (2.5% by weight) plus compost (2.5% by weight). Pure compost application showed highest yield during the two growth periods, followed by the biochar + compost mixture. biochar addition to mineral fertilizer significantly increased plant growth compared to mineral fertilizer alone. During the second growth period, plant yields were significantly smaller compared to the first growth period. biochar and compost additions significantly increased total organic C content during the two growth periods. Cation‐exchange capacity (CEC) could not be increased upon biochar addition while base saturation (BS) was significantly increased due to ash addition with biochar. On the other hand, compost addition significantly increased CEC. Biochar addition significantly increased soil pH but pH value was generally lower during the second growth period probably due to leaching of base cations. Biochar addition did not reduce ammonium, nitrate, and phosphate leaching during the experiment but it reduced nitrification. The overall plant growth and soil fertility decreased in the order compost > biochar + compost > mineral fertilizer + biochar > mineral fertilizer > control. Further experiments should optimize biochar–organic fertilizer systems.     

Relation between soil organic matter and yield levels of nonlegume crops in organic and conventional farming systems

The aim of this study was to evaluate the interaction between yield levels of nonleguminous crops and soil organic matter (SOM) under the specific conditions of organic and conventional farming, respectively, and to identify implications for SOM management in arable farming considering the farming system (organic vs. conventional). For that purpose, correlations between yield levels of nonlegume crops and actual SOM level (C_org, N_t, C_hwe, N_hwe) as well as SOM‐level development were examined including primary data from selected treatments of seven long‐term field experiments in Germany and Switzerland. Yield levels of nonlegume crops were positively correlated with SOM levels, but the correlation was significant only under conditions of organic farming, and not with conventional farming treatments. While absolute SOM levels had a positive impact on yield levels of nonlegumes, the yield levels of nonlegumes and SOM‐level development over time correlated negatively. Due to an increased demand of N from SOM mineralization, higher yield levels of nonlegumes obviously indicate an increased demand for OM supply to maintain SOM levels. Since this observation is highly significant for farming without mineral‐N fertilization but not for farming with such fertilization, we conclude that the demand of SOM‐level maintenance or enhancement and thus adequate SOM management is highly relevant for crop production in organic farming both from an agronomical and ecological point of view. Under conventional management, the agronomic relevance of SOM with regard to nutrient supply is much lower than under organic management. However, it has to be considered that we excluded other possible benefits of SOM in our survey that may be highly relevant for conventional farming as well.     

Enhanced micropropagation of Dendrobium huoshanense C.Z. Tang et S.J. Cheng through protocorm-like bodies: The effects of cytokinins,carbohydrate sources and cold pretreatment

The effects of cytokinins, carbohydrate sources and cold pretreatment on the conversion of protocorm-like bodies (PLBs) to shoots were investigated for the enhancement of micropropagation of Dendrobium huoshanense C.Z. Tang et S.J. Cheng, an endangered medicinal plant in China. The effects of cytokinins and carbohydrate sources on the conversion of PLBs to shoots depended on their types and concentrations. The best results in terms of shoot development from PLBs occurred on 1/2 MS medium supplemented with 20 μM kinetin and 10 g l⁻¹ maltose. Cold pretreatment at 10 °C for 1–2 weeks significantly enhanced the conversion of PLBs to shoots, and over 1300 shoots were obtained from one gram of PLBs after 3 months of culture. The developed shoots were rooted on growth regulator-free MS medium supplemented with 8 g/l banana paste to give complete plantlets, which were successfully acclimatized with a survival rate of approximately 65%. The results indicate that a suitable cold pretreatment (10 °C for 1 week) followed by the use of 20 μM kinetin and 10 g/l maltose in 1/2 MS medium would produce a large number of shoots from PLBs for plantlet regeneration of D. huoshanense.     

Consequences of a large-scale fragmentation experiment for Neotropical bats: disentangling the relative importance of local and landscape-scale effects

Context

Habitat loss, fragmentation and degradation are widespread drivers of biodiversity decline. Understanding how habitat quality interacts with landscape context, and how they jointly affect species in human-modified landscapes, is of great importance for informing conservation and management.

Objectives

We used a whole-ecosystem manipulation experiment in the Brazilian Amazon to investigate the relative roles of local and landscape attributes in affecting bat assemblages at an interior-edge-matrix disturbance gradient.

Methods

We surveyed bats in 39 sites, comprising continuous forest (CF), fragments, forest edges and intervening secondary regrowth. For each site, we assessed vegetation structure (local-scale variable) and, for five focal scales, quantified habitat amount and four landscape configuration metrics.

Results

Smaller fragments, edges and regrowth sites had fewer species and higher levels of dominance than CF. Regardless of the landscape scale analysed, species richness and evenness were mostly related to the amount of forest cover. Vegetation structure and configurational metrics were important predictors of abundance, whereby the magnitude and direction of response to configurational metrics were scale-dependent. Responses were ensemble-specific with local-scale vegetation structure being more important for frugivorous than for gleaning animalivorous bats.

Conclusions

Our study indicates that scale-sensitive measures of landscape structure are needed for a more comprehensive understanding of the effects of fragmentation on tropical biota. Although forest fragments and regrowth habitats can be of conservation significance for tropical bats our results further emphasize that primary forest is of irreplaceable value, underlining that their conservation can only be achieved by the preservation of large expanses of pristine habitat.