Risk factors for occupational brucellosis among veterinary personnel in Turkey

Veterinarians and veterinary technicians are at risk for occupational brucellosis. We described the risk factors of occupational brucellosis among veterinary personnel in Turkey. A multicenter retrospective survey was performed among veterinary personnel who were actively working in the field. Of 712 veterinary personnel, 84 (11.8%) had occupational brucellosis. The median number of years since graduation was 7 (interquartile ranges [IQR], 4–11) years in the occupational brucellosis group, whereas this number was 9 (IQR, 4–16) years in the non-brucellosis group (p < 0.001). In multivariable analysis, working in the private sector (odds ratio [OR], 2.8; 95% confidence interval [95% CI], 1.55–5.28, p = 0.001), being male (OR, 4.5; 95% CI, 1.05–18.84, p = 0.041), number of performed deliveries (OR, 1.01; 95% CI, 1.002–1.02, p = 0.014), and injury during Brucella vaccine administration (OR, 5.4; 95% CI, 3.16–9.3, p < 0.001) were found to be risk factors for occupational brucellosis. We suggest that all veterinary personnel should be trained on brucellosis and the importance of using personal protective equipment in order to avoid this infection.     

Correlated bursts of activity in the neonatal hippocampus in vivo

The behavior of immature cortical networks in vivo remains largely unknown. Using multisite extracellular and patch-clamp recordings, we observed recurrent bursts of synchronized neuronal activity lasting 0.5 to 3 seconds that occurred spontaneously in the hippocampus of freely moving and anesthetized rat pups. The influence of slow rhythms (0.33 and 0.1 hertz) and the contribution of both gamma-aminobutyric acid A-mediated and glutamate receptor-mediated synaptic signals in the generation of hippocampal bursts was reminiscent of giant depolarizing potentials observed in vitro. This earliest pattern, which diversifies during the second postnatal week, could provide correlated activity for immature neurons and may underlie activity-dependent maturation of the hippocampal network.     

Activation of integrin alphaIIbbeta3 by modulation of transmembrane helix associations

Transmembrane helices of integrin alpha and beta subunits have been implicated in the regulation of integrin activity. Two mutations, glycine-708 to asparagine-708 (G708N)and methionine-701 to asparagine-701, in the transmembrane helix of the beta3 subunit enabled integrin alphaIIbbeta3 to constitutively bind soluble fibrinogen. Further characterization of the G708N mutant revealed that it induced alphaIIbbeta3 clustering and constitutive phosphorylation of focal adhesion kinase. This mutation also enhanced the tendency of the transmembrane helix to form homotrimers. These results suggest that homomeric associations involving transmembrane domains provide a driving force for integrin activation. They also suggest a structural basis for the coincidence of integrin activation and clustering.     

Effect of freezing and thawing processes on some physical properties of saline–sodic soils mixed with sewage sludge or fly ash

Dispersion of saline–sodic soils was rather difficult to leach. Therefore, negative effects of freeze–thaw on soil physical properties should be reduced by inexpensive and practical methods. This study investigates the effect of freeze–thaw cycles (3, 6, and 9) on wet aggregate stability, bulk density, and permeability coefficient in three soils with different electrical conductivity and exchangeable sodium percentage levels (soil I: 5.30 dS m⁻¹, 47.51%; soil II: 42.80 dS m⁻¹, 55.45%; soil III: 36.30 dS m⁻¹, 59.34%) which consist of different proportions of sewage sludge and fly ash by volume (10%, 20%, and 30%). The experiment was conducted under laboratory conditions using disturbed and non-cropped soil samples mixed with sewage sludge and fly ash. Soils mixed with sewage sludge produced higher aggregate stability and permeability coefficients and lower bulk density values as compared to the soils mixed with fly ash. Sewage sludge added with a rate of 30% eliminated the negative effects of freeze–thaw processes on wet aggregate stability. Freeze–thaw processes did not affect the bulk density of the soils II and III, which were mixed with sewage sludge. However, fly ash addition decreased the bulk density of these soils very significantly after nine freeze–thaw cycles. Addition of sewage sludge or fly ash with rates of 20% and 30% significantly increased the permeability coefficients in soil I after nine freeze–thaw cycles. Results indicated that addition of sewage sludge and/or fly ash to saline–sodic soils could be alternative way for reducing negative effects of freezing–thawing on soil wet aggregate stability, bulk density, and permeability coefficient.     

Is metoclopramide an alternative to tramadol in management of post-operative pain? An experimental study

In this study, metoclopramide was compared with other pharmacological agents for preventing post-operative pain. Sixty Sprague-Dawley male rats, weighing 310-345 g were included in the study; 1 cm surgical incision, including skin, facia, and muscle was made to the plantar surface of rear foot of all anaesthetized rats. Rats were randomized into four groups. In group 1 (group S) 2 cm3 saline, in group 2 (group M) 2 cm3 metoclopramide (5 mg/kg) in group 3 (group T) 2 cm3 tramadol (45 mg/kg), in group 4 (group M+T) half doses of group M and group T was given intraperitoneally. Post-operative pain was assessed after 2 h, first and second days of incision. Post-operative pain scores were found to be significantly lower in group M, group T and group M+T when compared with the control group. But there was no significant difference between these groups. We concluded that metoclopramide, with low cost, fewer side-effects and being significantly effective for preventing post-operative pain, can be an alternative to tramadol.     

Computational design of peptides that target transmembrane helices

A variety of methods exist for the design or selection of antibodies and other proteins that recognize the water-soluble regions of proteins; however, companion methods for targeting transmembrane (TM) regions are not available. Here, we describe a method for the computational design of peptides that target TM helices in a sequence-specific manner. To illustrate the method, peptides were designed that specifically recognize the TM helices of two closely related integrins (alphaIIbbeta3 and alphavbeta3) in micelles, bacterial membranes, and mammalian cells. These data show that sequence-specific recognition of helices in TM proteins can be achieved through optimization of the geometric complementarity of the target-host complex.     

Quantitative trait loci for agronomic and seed quality traits in an F2 and F4:6 soybean population

Molecular breeding is becoming more practical as better technology emerges. The use of molecular markers in plant breeding for indirect selection of important traits can favorably impact breeding efficiency. The purpose of this research is to identify quantitative trait loci (QTL) on molecular linkage groups (MLG) which are associated with seed protein concentration, seed oil concentration, seed size, plant height, lodging, and maturity, in a population from a cross between the soybean cultivars ‘Essex’ and ‘Williams.’ DNA was extracted from F₂ generation soybean leaves and amplified via polymerase chain reaction (PCR) using simple sequence repeat (SSR) markers. Markers that were polymorphic between the parents were analyzed against phenotypic trait data from the F₂ and F_4:6 generation. For the F₂ population, significant additive QTL were Satt540 (MLG M, maturity, r² = 0.11; height, r² = 0.04, seed size, r²= 0.06], Satt373 (MLG L, seed size, r² = 0.04; height, r² = 0.14), Satt50 (MLG A1, maturity r² = 0.07), Satt14 (MLG D2, oil, r² = 0.05), and Satt251 (protein r² = 0.03, oil, r² =0.04). Significant dominant QTL for the F₂ population were Satt540 (MLG M,height, r² = 0.04; seed size, r² = 0.06) and Satt14 (MLG D2, oil, r² = 0.05). In the F_4:6 generation significant additive QTL were Satt239 (MLGI, height, r² = 0.02 at Knoxville, TN and r² = 0.03 at Springfield, TN), Satt14 (MLG D2, seed size, r² = 0.14 at Knoxville, TN), Satt373 (MLG L, protein, r² = 0.04 at Knoxville, TN) and Satt251 (MLG B1, lodging r² = 0.04 at Springfield, TN). Averaged over both environments in the F_4:6 generation, significant additive QTL were identified as Satt251 (MLG B1, protein, r² = 0.03), and Satt239 (MLG I, height, r² = 0.03). The results found in this study indicate that selections based solely on these QTL would produce limited gains (based on low r² values). Few QTL were detected to be stable across environments. Further research to identify stable QTL over environments is needed to make marker-assisted approaches more widely adopted by soybean breeders. This revised version was published online in July 2006 with corrections to the Cover Date.     

Effects of consecutive applications of gypsum in equal,increasing, and decreasing quantities on soil hydraulic conductivity of a saline‐sodic soil

The objective of this study was to determine the effects of consecutive application of gypsum dissolved in leaching water on hydraulic conductivity of a saline‐sodic soil. Drainage type plastic columns with a 10 cm diameter were used in this laboratory experiment. Soil depth within columns was 30 cm with an average bulk density of 1.38 g cm^–3. Leaching water was applied in six equal portions. Total gypsum was applied at 1, 3, and 5 portions after dissolving in leaching water. In dissolution, equal (1.273 + 1.273 + 1.273 Mg ha^–1), increasing (0.637 + 1.273 + 1.910 Mg ha^–1) and decreasing (1.910 + 1.273 + 0.637 Mg ha^–1) quantities of gypsum were used. Results were compared with the control treatment, in which total amount of gypsum were mixed with surface layer of soil column before leaching. Hydraulic conductivity of soil increased in all treatments. The maximum hydraulic conductivity value was obtained at consecutive application of gypsum at decreasing quantities.     

Molecular cloning, nucleotide sequence and characteristics of a xylanase gene (xynA) from Ruminococcus albus 7

A 2.6-kb DNA fragment encoding a xylanase gene ( xyn A) was cloned from the rumen hemicellulolytic bacterium Ruminococcus albus 7. The deduced primary structure of the protein (XynA) was divided into a signal peptide region and 3 domains. Domain A was identified as a family 11 (G) catalytic domain, but one amino acid residue was replaced by another in an active site signature 1 of family 11. Domain B is a stabilizing domain for the catalytic domains of families 10 and 11. Deletion of domain B reduced stability of the xylanase at high temperature and at high and low pH. Domain B may be useful for protein engineering of xylanase. Domain C has sequence similarity to deacetylases and NodB proteins.