Analysis of a Secreted Aspartic Peptidase Disruption Mutant of Glomerella cingulata

Peptidases have been implicated in the pathogenicity of fungi that cause disease in plants. Expression of the secreted aspartic peptidase gene (gcsap), of a Glomerella cingulata isolate pathogenic on apples, is induced during appressorium formation. To determine whether the secreted aspartic peptidase (GcSAP) is essential to pathogenicity, gcsap was disrupted using a vector containing a 637 bp fragment of genomic DNA that encodes the sequence spanning the two active site aspartic acid (Asp) residues. To ensure that the truncated gcsap gene products could not have residual peptidase activity the codons for the active site residues Asp¹¹² and Asp²⁹⁷ were both mutated to histidine residues. Both PCR and Southern analysis confirmed disruption of gcsap. Neither gcsap mRNA nor GcSAP activity was detected in the disruption mutant. Pathogenicity tests on fruit from three apple cultivars showed that GcSAP was not required for pathogenicity. The disruption mutant grew on medium containing protein as the sole source of nitrogen because G. cingulata secretes a previously undetected peptidase(s). A serine peptidase that had a pH optimum between pH 7.0 and 8.0 and a K _m of 0.25 mM for the synthetic substrate succinyl-Ala–Ala–Pro–Phe-p-nitroanilide was identified.     

Sex‐dependent responses of perch to changes in water clarity and temperature

Rising temperatures and decreasing water transparency of lakes have strong wide ranging effects on fish. Fish responses to various changes in the environment are usually species‐dependent, but responses may also vary within species. In general, large individuals are considered to be more sensitive to environmental variation due to higher energy demand, than smaller individuals. Similarly, large individuals require more food to maintain bodily functions and are thus more sensitive to resource and food scarcity. These size‐specific responses to environmental gradients are also sex‐dependent in species that exhibit sexual size dimorphism (SSD). We studied in enclosures with short‐term experiments how rising temperatures and decreasing water transparency regulate the feeding rates of female and male European perch (Perca fluviatilis L.). To explore experimental results, we calculated perch SSD in nine lakes with varying environmental conditions using previously collected field data. The results of the experiments revealed that the combined effect of water transparency and temperature on the feeding rate of fish is gender‐dependent: feeding rate of females decreased more than that of males. The experimental results were also supported by field data that revealed a negative relation between water transparency and the magnitude of SSD in perch. Our results suggest that rising temperatures and decreasing water transparency may potentially decrease fish size in a sex‐dependent manner. As female size is one of the main demographic traits determining the reproductive success of a fish population, changing environments may have unexpected and far‐reaching consequences on fish population dynamics.     

An analysis of the effects of water stress on leaf growth and yield of three barley cultivars

The main objective of the study was to evaluate the sensitivity of Iraqi local barley cultivar (Black) to soil water deficit as compared to other barley cultivars, namely: CM-72 and Arivat. The local cultivar proved to be susceptible during germination and emergence, but it developed resistance during the vegetative growth and yield formation stages. Growth analysis of individual leaves clearly showed that Black barley produced leaves of long growth duration which could affect the growth processes especially cell division. Thus, the reduction in the number of cells composing those leaves was small in the cultivar Black. Leaf growth rates as soil matric potential decreased, were reduced considerably, although, no clear trends were observed between cultivars. On the other hand, the smaller cell volume of local cultivar may have a role in its ability to tolerate water deficit. Some evidence that the local cultivar is post-flowering resistant is discussed.     

The ecosystem services concept: a new Esperanto to facilitate participatory planning processes?

Landscape Ecology - Several case studies investigated the role of ecosystem services in participatory planning processes. However, no systematic study exists that cuts across a large number of...     

Carbon,nitrogen and phosphorus leaching after site preparation at a boreal forest clear-cut area

Clear-cutting followed by mechanical site preparation is the major disturbance influencing nutrient and water fluxes in Fennoscandian boreal forests. The effects of soil harrowing on the fluxes of dissolved organic carbon (DOC), dissolved nitrogen compounds (organic N, NH₄⁺ and NO₃⁻) and water soluble phosphorus (PO₄³⁻) through a podzolic soil were studied in a clear-cut in eastern Finland for 5 years. The old, mixed coniferous stand was clear-cut and stem only harvested in 1996 followed by soil harrowing in 1998 and planting in June 1999. Zero-tension lysimeters were used to collect soil water from below different soil horizons in the three types of microsites that resulted from site preparation treatment: low ridges (25% of clear-cut area), shallow furrows (30%) and the undisturbed soil (45%). After soil harrowing, the leaching of DOC, N and P from below the B-horizon increased compared to pre-treatment levels. However, the increases were short-lasting; 1–2 years for inorganic N and P, and 5 years for DOC and organic N. The highest concentrations were associated with the ridges and lowest with the furrows, reflecting the differences in amount of organic matter present in each microsite type and, for N, to enhanced mineralization and nitrification. Leaching from below the B-horizon over the 5 years following soil harrowing for the whole clear-cut area was 36.5 kg ha⁻¹ for DOC, 0.88 kg ha⁻¹ for NH₄-N, 0.46 kg ha⁻¹ for NO₃-N, 1.24 kg ha⁻¹ for organic N and 0.09 kg ha⁻¹ for PO₄-P. Site preparation increased temporarily the risk for nutrient leaching into watercourses and groundwater from the clear-cut area but soil fertility was not affected since the leached amounts remained small. The main reasons for the observed low leaching values were the rapid recovery of ground vegetation and low N deposition loads.     

Pharmacokinetics of Amoxicillin Trihydrate in Desert Sheep and Nubian Goats

The pharmacokinetics of amoxicillin were studied in five Desert sheep and five Nubian goats after intravenous (i.v.) or intramuscular (i.m.) administration of a single dose of 10 mg/kg body weight. Following i.v. injection, the plasma concentration-versus-time data were best described by a two-compartment open model. The kinetic variables were similar in both species except for the volume of the central compartment (V_c), which was larger in sheep (p<0.05). Following i.m. injection, except for the longer half-life time of absorption in goats (p<0.05), there were no significant differences in other pharmacokinetic parameters between sheep and goats. The route of amoxicillin administration had no significant effect on the terminal elimination half-life in either species. The bioavailability of the drug (F) after i.m. administration was high (>0.90) in both species. These results indicate that the pharmacokinetics of amoxicillin did not differ between sheep and goats; furthermore, because of the high availability and short half-life of absorption, the i.m. route gives similar results to the i.v. route. Therefore, identical intramuscular and intravenous dose regimens should be applicable to both species.     

Polymerisation of added coniferyl alcohol by inherent xylem peroxidases and its effect on fungal decay resistance of Norway spruce

It is known that active peroxidase isozymes exist in mature wood of Norway spruce (Picea abies L. Karst.) and that they remain active for years and are found even in the heartwood (in Scots pine), where all cellular activity has ceased. This peroxidase activity was utilised in the impregnation of wood blocks with a natural monolignol, coniferyl alcohol and hydrogen peroxide. The hypothesis was that the internal wood peroxidases would oxidise the added monolignol and bind it stably into the cell wall matrix, which could hinder fungal decay. Since coniferyl alcohol is not very soluble in water, the impregnation was done under vacuum with an acetone–water solution containing 10% coniferyl alcohol and 0.4 mM H₂O₂ at room temperature (ca. 0.02 g of coniferyl alcohol was added to 1 g of wood). After impregnation, dimers of coniferyl alcohol and free coniferyl alcohol were found in acetone extracts with GC–MS analysis. Penetration of coniferyl alcohol and non-extractable reaction products were studied from the wood blocks with FTIR PAS technique. The wood samples treated were also subjected to a fungal decay test with Coriolus versicolor. This treatment hindered fungal decay in a 60-day experiment and led to a dry weight loss of 8.8% in comparison with 19.9% in the control. The reactions of coniferyl alcohol and H₂O₂ in the presence of peroxidases are discussed as well as the use of monolignols to increase wood decay resistance.     

Contrasting effects of elevated carbon dioxide concentration and temperature on Rubisco activity,chlorophyll fluorescence,needle ultrastructure and secondary metabolites in conifer seedlings

Scots pine (Pinus sylvestris L.) and Norway spruce (Picea abies (L.) Karst.) seedlings were grown for 50 days in growth chambers in an ambient or twice ambient carbon dioxide concentration ([CO2]) at a day/night temperature of 19/12 degrees C or 23/16 degrees C. Although elevated [CO2] (EC) had only slight effects on the growth parameters measured, elevated temperature (ET) increased above ground dry mass of both species. Among treatments, biomass accumulation of both species was greatest in the combined EC + ET treatment. The EC treatment induced thylakoid swelling and increased numbers of plastoglobuli observed in Scots pine needles. Although EC had little effect on Rubisco protein or N concentration of needles, ET had a large effect on N-containing compounds and enhanced N allocation from 1-year-old needles. Terpenoids were more responsive to EC and ET than total phenolics. Generally, terpene concentrations were reduced by EC and increased by ET. Increased terpenoid concentrations in response to ET might be associated with thermotolerance of photosynthesis. In Norway spruce, EC decreased total phenolic concentrations in needles, probably as a result of increased growth. We conclude that, in seedlings of these boreal species, the effects of elevated [CO2] on the studied parameters were small compared with the effects of elevated temperature.     

Questionnaire study and postmortem findings in backyard chicken flocks in Finland

Background

Although modern commercial poultry production today is based on large farms and intensive husbandry, keeping backyard poultry has regained popularity in industrialized countries. However, the health status of backyard flocks is still relatively poorly documented. A questionnaire was sent to the owners of 376 backyard poultry flocks (<500 birds) in order to study health management procedures and characterize backyard poultry populations in Finland. Information was also collected on the postmortem findings from non-commercial flocks using necropsy data from the Finnish Food Safety Authority (Evira).

Results

Backyard flocks in Finland are small in size (<50 birds), comprising mainly chickens. Based on the results of the questionnaire, the health of such flocks is good, mortality low and vaccinations are not commonly used. Most of the flocks were registered in the national poultry register. The standard biosecurity practices are not generally applied and contact with wild birds, pets and farm animals is frequent, which can make the flocks more prone to infectious diseases. We conducted an 11-year retrospective study of the postmortem necropsy findings of the Evira in order to document the diseases, which caused mortality in backyard chickens in Finland. Necropsy was performed on a total of 132 non-commercial laying hens during 2000 – 2011. The most common postmortem findings were Marek’s disease (27%) and colibacillosis (17%).

Conclusions

This study is the first to report data on characteristics of and management practices for backyard chicken flocks in Finland. Close connections with commercial flocks are rare and farms are usually distantly located suggesting that the risk that these backyard flocks pose to commercial poultry is low.     

Longer migration not necessarily the costliest strategy for migrating humpback whales

1. Long‐distance migration is a demanding physical activity, and how well animals manage the associated costs will have important implications for their fitness.
2. The Oceania humpback whale (Megaptera novaeangliae) population is recovering from past exploitation markedly slower than the neighbouring east Australian whales. The reasons for this are unknown, although higher energetic costs of longer migratory distances could be a possible explanation. Due to their fully aquatic lives, studying the energy expenditure of these large animals requires methods that do not rely on capturing the animal, such as bioenergetic models.
3. A state‐space model was fitted to satellite data to infer behavioural states for southern migrating whales. Travel speeds and behavioural states were used in a bioenergetic model to estimate the energetic cost of the migration phase. Relative differences in average duration, distance, and energetic costs were compared between migratory routes and distances.
4. Total energy used during migration was a trade‐off between cost of transport (determined by travel speed) and daily maintenance (determined by daily basal metabolic costs). Oceania whales migrating to the Amundsen and Bellingshausen Seas travelled fastest and furthest, 15 and 21% further than whales migrating to the d'Urville Sea (east Australian whales) and Ross Sea, respectively. Therefore, they had the highest cost of transport, 25 and 85% higher than for d'Urville Sea and Ross Sea whales, respectively. However, energy saved in terms of daily maintenance by using fewer days to complete a longer migration resulted in only a 6–7% increase in total energetic cost.
5. The results highlight that travelling further does not necessarily translate into an increase in total energy expenditure for migratory whales, since they can compensate for longer distance by travelling faster. Further research on the energetics of different whale populations could provide insight into the productivity of Southern Ocean feeding regions and help understand the environmental and anthropogenic effects on the whales' energy budgets.