Spatial variability in the growth of direct-seeded rainfed lowland rice (Oryza sativa L.) in northeast Thailand

Large within-field variation in rice growth often causes production loss in broadcast-seeded (BC) rainfed lowland rice. The spatial variability of direct-seeded rainfed lowland rice was evaluated in 2004, 2005, and 2007 in on-station experiments at Ubon Ratchathani, northeast Thailand, in relation to soil water content and weed infestation, by adopting semivariogram and block kriging, including comparisons among BC with harrowing (BCH; no weeding), BC with no harrowing (BCNH; no weeding), and row-seeded (RS; interrow weeding once) fields. BCH and BCNH were also compared in 11 farmers’ fields in 2006 and 2007, to assess the effect of harrowing on rice growth and weed infestation. During most of the rice growing periods, flooded and non-flooded portions existed simultaneously in the fields, with different proportions among years and among seeding methods in the on-station experiment. BCH and BCNH rice had large within-field variation in seedling density, heading date, shoot dry matter, grain yield, harvest index, panicle density, and filled spikelet per panicle, as well as in weed infestation, measured by a quick visual estimation. Many of the measured variables (except mean soil water content in RS in 2007, seedling density in BCH in 2005 and 2007, shoot dry matter in BCH and BCNH in 2007, and panicle density in BCH in 2007) were spatially dependent (i.e., data from nearby locations were most similar) by geostatistical analysis. Analysis of correlations using the 420 data sets of BCH plots in 2005 and BCH, BCNH, and RS plots in 2007 revealed a positive correlation between soil water content and grain yield and negative correlations between weed infestation and soil water content and grain yield. Compared with BCH, in 2007 BCNH had much lower grain yield because of lower soil water content after establishment and more weed infestation. BCH had higher grain yield than BCNH in weedy fields in the farmers’ fields experiment. RS with interrow weeding resulted in a smaller coefficient of variation, smaller sill value, and higher grain yield than BCH, due to less weed infestation and a higher proportion of flooded water. These results indicated that reducing the spatial variability in rice growth requires careful field preparation, such as harrowing to level the soil surface and to reduce the uneven distribution of standing water and the variability in soil water content, combined with effective crop and weed management (i.e., harrowing and row-seeding). This is the first study that examined spatial variability in the growth of direct-seeded rice as a function of soil water content and weed infestation in a rainfed lowland environment.     

Quantitative structure-activity relationships of herbicidal N′-substituted phenyl-N-methoxy-N-methylureas

Relationships between three types of herbicidal activity of N′-substituted phenyl-N-methoxy-N-methylureas and substitution at the benzene ring were analyzed by the Hansch-Fujita method. First, the Hill inhibitory activity was correlated with electronic (σ) as well as hydrophobic (π) substituent constants. The existence of an optimum value of hydrophobicity for substituents was suggested to reach the target site of action. Second, bliaching activity observed for the 3-substituted but not for 4-substituted compounds was correlated with π, σ, and steric substituent constant, E_s. Third, the postemergent herbicidal activity was shown to correlate linearly with the Hill inhibitory activity, pI₅₀, and hydrophobic parameter, π.     

Improvement of rice (Oryza sativa L.) growth in upland conditions with deep tillage and mulch

The productivity of upland rice in Japan as well as in the world is low and unstable owing to scarce and unpredictable rainfall. The objective of this study was to examine whether agronomic methods could enhance grain yield of upland rice. Four field experiments were conducted from 2001 to 2003 in Nishitokyo, Japan, under upland conditions with different water supplies, in order to quantify the effects of deep tillage combined with deep placement of manure (50-cm depth), straw mulch (6 t ha⁻¹), or their combinations on the growth and grain yield of rice. Mulch kept surface soil moisture higher than without mulch even at reproductive stage, and it increased yield to the greatest extent under the most favourable conditions with much rainfall before heading (i.e., 2003). Deep tillage with deep placement of manure induced deep root proliferation and higher nitrogen uptake, increasing biomass production, and panicle number, and consequently grain yield was enhanced under the two lowest yielding environments with less rainfall before heading. Rice plants with deep tillage with deep manure application without mulch tended to have lower leaf water potential and higher diffusion resistance during drought, and negative effects on grain filling and harvest index in some experiments compared with the control. When deep tillage with deep placement of manure was combined with mulching in two experiments in 2002 and 2003, grain yield always enhanced compared with the control (P < 0.10, 6.0 t ha⁻¹ versus 5.4 t ha⁻¹ on average), suggesting their synergetic mechanisms for yield increase and stabilization. The results showed that deep tillage or mulching can improve grain yield of rice under drought-prone rainfed upland conditions in a temperate climate on an Andosol, and their combination had more consistent and greater positive effects.     

On the soil colour,determined by spectrophotometer

Results, here published, are from the determination of the colour, by the use of spectrophotometer (Shimazu, QR-50) with the soils from pedogenic horizons of principal soil types In Japan.     

Knockout of targeted gene in porcine somatic cells using zinc‐finger nuclease

Targeted genome editing is a widely applicable approach for efficiently modifying any sequence of interest in animals. It is very difficult to generate knock‐out and knock‐in animals except for mice up to now. Very recently, a method of genome editing using zinc‐finger nucleases (ZFNs) has been developed to produce knockout rats. Since only injection of ZFNs into the pronuclear (PN) embryo is required, it seems to be useful for generating gene‐targeted animals, including domestic species. However, no one has reported the successful production of knockout pigs by direct injection of ZFNs into PN embryos. We examined whether ZFN works on editing the genome of porcine growth hormone receptor in two kinds of cell lines (ST and PT‐K75) derived from the pig as a preliminary study. Our data showed that pZFN1/2 vectors were efficiently transfected into both ST and PT‐K75 cells. In both cell lines, results from Cel‐I assay showed that modification of the targeted gene was confirmed. We injected ZFN1/2 mRNAs into the nucleus of PN stage embryos and then they were transferred to the recipients. However, pups were not delivered. Taken together, ZFN can be an available technology of genome editing even in the pig but further improvement will be required for generating genome‐modified pigs.     

Principal soil types (Great soil groups) in Japan

Classified into three types, zonal, intra-zonal, and azonal, Japanese soil type may be explained as follows (see “General map of principal soil types”).     

Vitrification procedure decreases inositol 1,4,5‐trisphophate receptor expression,resulting in low fertility of pig oocytes

Although cryopreservation of mammalian oocytes is an important technology, it is well known that unfertilized oocytes, especially in pigs, are highly sensitive to low temperature and that cryopreserved oocytes show low fertility and developmental ability. The aim of the present study was to clarify why porcine in vitro matured (IVM) oocytes at the metaphase II (MII) stage showed low fertility and developmental ability after vitrification. In vitro matured cumulus oocyte complexes (COCs) were vitrified with Cryotop and then evaluated for fertility through in vitro fertilization (IVF). Although sperm‐penetrated oocytes were observed to some extent (30–40%), the rate of pronuclear formation was low (9%) and none of them progressed to the two‐cell stage. The results suggest that activation ability of cryopreserved oocytes was decreased by vitrification. We examined the localization and expression level of the type 1 inositol 1,4,5 trisphosphate receptor (IP₃R1), the channel responsible for Ca²⁺ release during IVF in porcine oocytes. Localization of IP₃R1 close to the plasma membrane and total expression level of IP₃R1 protein were both decreased by vitrification. In conclusion, our present study indicates that vitrified‐warmed porcine COCs showed a high survival rate but low fertility after IVF. This low fertility seems to be due to the decrease in IP₃R1 by the vitrification procedure.     

Generation of rats from vitrified oocytes with surrounding cumulus cells via in vitro fertilization with cryopreserved sperm

The objective of this study was to evaluate fertility and full‐term development of rat vitrified oocytes after in vitro fertilization (IVF) with cryopreserved sperm. Oocytes with or without surrounding cumulus cells were vitrified with 30% ethylene glycol + 0.5 mol/L sucrose + 20% fetal calf serum by using the Cryotop method. The warmed oocytes were co‐cultured with sperm. Although the denuded/vitrified oocytes were not fertilized, some of the oocytes vitrified with cumulus cells were fertilized (32.7%) after IVF with fresh sperm. When IVF was performed with cryopreserved sperm, vitrified or fresh oocytes with cumulus cells were fertilized (62.9% or 41.1%, respectively). In addition, to confirm the full‐term development of the vitrified oocytes with surrounding cumulus cells after IVF with cryopreserved sperm, 108 vitrified oocytes with two pronuclei (2PN) were transferred into eight pseudopregnant females, and eight pups were obtained from three recipients. The present work demonstrates that vitrified rat oocytes surrounded by cumulus cells can be fertilized in vitro with cryopreserved sperm, and that 2PN embryos derived from cryopreserved gametes can develop to term. To our knowledge, this is the first report of successful generation of rat offspring derived from vitrified oocytes that were fertilized in vitro with cryopreserved sperm.     

Assessment of management of direct seeded rice production under different water conditions in Cambodia

In order to assess direct seeding of rice technology to cope with future agricultural labor shortage in Cambodia, agronomic experiments were conducted in 2005 and 2006 to compare direct seeding with transplanting under three water conditions (non-flooded, shallow flooded, and deep flooded conditions) with/without weed control by herbicides (bentazone and cyhalofop-butyl) for two Cambodian rice varieties (shorter stature and early maturity Sen Pidao, taller stature and longer maturity Phka Rumduol). Average rice yield in 2 years was lower in direct seeding (341 g m⁻²) than transplanting (404 g m⁻²), but interaction components with year, varieties, water conditions, and weed management were significant, and the attained maximum yield of direct seeding (510 and 464 g m⁻² for Phka Rumduol variety in shallow flooded condition with weeding in 2005 and 2006, respectively) was similar to that of transplanting. Plant length and dry weight of rice were reduced in non-flooded and deep flooded conditions compared with shallow flooded condition, and grain yield was the highest in shallow flooded condition. Yield advantage of Phka Rumduol over Sen Pidao increased under direct seeding, particularly under non-flooded conditions in 2005 because weed infestation was more suppressed in Phka Rumduol even without weeding. Increase in 100 g m⁻² of weed infestation prior to heading (dry weight basis) reduced about 20% of attainable yield with weed control. This study identified importance of stature and growth duration of rice varieties and presence of standing water as well as the weed control, in order to develop and extend direct seeding in the Cambodia.     

Photometric soil color determination

The characteristic soil colors of some principal soil types in Japan and its neighbourhood, were determined by the use of photocolorimeter (see Table 1).