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Emilie Laurin Krishna Thakur Peter G. Mohr Paul Hick Mark St. J. Crane Ian A. Gardner Nicholas J. G. Moody Axel Colling Ingo Ernst 《Journal of fish diseases》2019,42(11):1471-1491
Samples from multiple animals may be pooled and tested to reduce costs of surveillance for infectious agents in aquatic animal populations. The primary advantage of pooling is increased population‐level coverage when prevalence is low (<10%) and the number of tests is fixed, because of increased likelihood of including target analyte from at least one infected animal in a tested pool. Important questions and a priori design considerations need to be addressed. Unfortunately, pooling recommendations in disease‐specific chapters of the 2018 OIE Aquatic Manual are incomplete and, except for amphibian chytrid fungus, are not supported by peer‐reviewed research. A systematic review identified only 12 peer‐reviewed aquatic diagnostic accuracy and surveillance studies using pooled samples. No clear patterns for pooling methods and characteristics were evident across reviewed studies, although most authors agreed there is a negative effect on detection. Therefore, our purpose was to review pooling procedures used in published aquatic infectious disease research, present evidence‐based guidelines, and provide simulated data examples for white spot syndrome virus in shrimp. A decision tree of pooling guidelines was developed for use by peer‐reviewed journals and research institutions for the design, statistical analysis and reporting of comparative accuracy studies of individual and pooled tests for surveillance purposes. 相似文献
3.
Mazumder S Morvan C Thakur S Ray B 《Journal of agricultural and food chemistry》2004,52(11):3556-3562
Pectic polysaccharides were obtained from chalkumra (Benincasa hispida) fruit by sequential extraction with ammonium oxalate (fraction BOX), dilute acid (fraction BHCl), and cold dilute alkali (fraction BOH). The highest yield of polysaccharides was obtained with oxalate and HCl. BOX was enriched in partly methyl-esterified galacturonic acid, whereas BHCl and BOH contained mostly galactose. All of the extracts showed similar elution patterns in size exclusion chromatography although the intrinsic viscosities (eta) were different (132 +/- 6, 100 +/- 5, and 285 + 10 mL/g for BOX, BHCl, and BOH, respectively). From fractionation by anion exchange chromatography, homogalacturonan (as seen from sugar analysis and Fourier transform infrared spectrum) accounted for more than half of BOX and 11% of BHCl. Methylation analyses and hydrolysis of BHCl with endo-beta-(1-->4)-d-galactanase showed the presence of beta-(1-->4)-d-galactan. The neutral galactan represented more than 76% of BHCl and approximately 40% of BOH. The other polysaccharides were complex galactans in BOH and an acidic arabinan (<1%) in BOX and BHCl. 相似文献
4.
A. K. Thakur S. Rath S. Roychowdhury N. Uphoff 《Journal of Agronomy and Crop Science》2010,196(2):146-159
The System of Rice Intensification (SRI) reportedly enhances the yields of rice (Oryza sativa L.) through synergy among several agronomic management practices. This study was conducted to investigate the effects on rice plant characteristics and yield by comparing the plants grown with different methods of cultivation – SRI vs. recommended management practices (RMP) focusing on the impact of different plant spacings. Performance of individual hills was significantly improved with wider spacing compared with closer‐spaced hills in terms of root growth and xylem exudation rates, leaf number and leaf sizes, canopy angle, tiller and panicle number, panicle length and grain number per panicle, grain filling and 1000‐grain weight and straw weight, irrespective of whether SRI or RMP was employed. Both sets of practices gave their highest grain yield with the spacing of 20 × 20 cm; however, SRI yielded 40 % more than the recommended practice. At this spacing, canopies also had the highest leaf area index (LAI) and light interception during flowering stage. The lowest yield was recorded at 30 × 30 cm spacing under both the practices, as a result of less plant population (11 m?2), despite improved hill performance. During the ripening stage, hills with wider spacing had larger root dry weight, produced greater xylem exudates, and transported these towards shoot at faster rates. These features contributed to the maintenance of higher chlorophyll levels, enhanced fluorescence and photosynthesis rates of leaves and supported more favourable yield attributes and grain yield in individual hills than in closely‐spaced plants. Moreover, these parameters further improved in SRI, apart from the enhanced percentage of effective tillers and showed substantial and positive impacts on grain yield (17 %) compared with recommended practice. In conclusion, wide spacing beyond optimum plant density, however, does not give higher grain yield on an area basis and for achieving this, a combination of improved hills with optimum plant population must be worked out for SRI. 相似文献
5.
Thakur Shikha Verma Subhash Chander Sharma Prem Lal Chandel Rajeshwar Singh Sharma Priyanka Sharma Shubham Sharma Prajjwal 《Phytoparasitica》2023,51(2):189-198
Phytoparasitica - Diaeretiella rapae (McIntosh) (Hymenoptera: Braconidae) is one of the most promising, effective and a common endoparasitoid of different aphid species including cabbage aphid,... 相似文献
6.
Thakur Manisha Luharch Rakshandha Sharma Vishal Sharma Dharam Paul 《Genetic Resources and Crop Evolution》2022,69(2):567-575
Genetic Resources and Crop Evolution - Santa Rosa and Frontier are the major Japanese plum (Prunus salicina Lindl.) cultivars grown throughout the world. The present investigation was performed to... 相似文献
7.
Summary Studies on the inheritance pattern of bacterial leaf spot (BLS), yellow mosaic (YM) and Cercospora leaf spot (CLS) reactions in crosses of BLS and YM resistant/tolerant but CLS susceptible × CLS resistant but BLS and YM susceptible parents indicated that resistances to BLS and CLS were governed by single dominant genes, whereas YM tolerance was a monogenic recessive character. The studies also indicated that these three genes were inherited independently. The simple inheritance pattern and independent assortment of the genes governing resistance/tolerance to these diseases suggest that the usual breeding methods will be adequate to develop multi-disease resistant mungbean cultivars.Paper XII in the series Studies on resistance in crops to bacterial diseases in India. 相似文献
8.
Summary In a comparison of methods to study inheritance of plant elongation ability, 15-, 20-, 25-, 30-, and 35-day-old F2 populations of a cross between Baisbish (floating variety) and IR42 (nonelongating semidwarf modern variety) of rice, (Oryza sativa L.) were subjected to 65 cm water depth for 7 days. Frequency distribution of plant height before and after submergence was obtained. Bimodal curves in 15-, 20- and 25-day-old populations gave good fits to 9:7 elongating: nonelongating plants, suggesting that elongation was due to two dominant complementary genes. Segregation in the 30-day-old population was not clear-cut. A seedling age of 20 days was subsequently chosen for further studies.Two F2's involving floating rice and a nonelongating semidwarf; four F2's involving floating rice and an elongating semidwarf; and two F2's involving elongating and nonelongating semidwarf parents were studied with 20-day-old seedlings in the same way. Floating rice combinations with nonelongating semidwarf parents as well as with elongating semidwarf parents segregated into 9:7 elongating: nonelongating ratio. It is possible that because elongating and nonelongating dwarf parents did not differ much in elongation ability at seedling age, their combination with floating rice parents provided similar segregation. The F2 distributions for height in elongating and nonelongating dwarf cross combinations were continuous with one peak.Genetic constitution of parents proposed are Sd1 Sd1 El El for floating parents, sd1 sd1 El El for semidwarf elongating, and sd1 sd1 el el for dwarf nonelongating. 相似文献
9.
Thirty-six Fusarium strains were grown on cracked yellow corn and evaluated for optimum fusaproliferin production, with Fusarium subglutinans E-1583 producing the highest levels (1600 microg/g). Three solvent systems were tested for extracting fusaproliferin from the cultures of F. subglutinans E-1583. Methanol gave the highest fusaproliferin recovery, followed by methanol/1% aqueous NaCl (55:45, v/v) and acetonitrile/methanol/H(2)O (16:3:1, v/v/v). Hexane partitioning was effective in removing many impurities from the crude fusaproliferin extracts prior to the liquid chromatography step. Fusaproliferin samples were further purified by high-performance liquid chromatography (HPLC) with a C18 preparatory column using a mobile phase of acetonitrile/H(2)O (80:20, v/v). The purity of the fusaproliferin was verified by analytical HPLC, GC/MS, (1)H NMR spectroscopy, and electrospray ionization (ESI) MS. The isolated fusaproliferin was shown to be free of impurities and can be used as a standard for routine analysis. Fusaproliferin was shown to be temperature-sensitive when samples were stored at room temperature (20-24 degrees C) for more than several days. After 30 days at 4 degrees C, approximately 8% of the fusaproliferin had been transformed to deacetyl-fusaproliferin; however, samples stored at -20 degrees C for 1 year contained only trace amounts of the deacetylated form. 相似文献
10.
Deb Manas Kanti Thakur Manisha Mishra R. K. Bodhankar Ninad 《Water, air, and soil pollution》2002,140(1-4):57-71
An assessment of arsenic contamination in Raipur city (21°14′N, 18°38′E) of Chhattisgarh in the central part of India is reported here, for a monitoring period between November 1996 to June 1997, in airborne dust particulates. The concentration level of As were higher in the industrial site, followed by heavy traffic as compared to other sites. The monthly atmospheric arsenic deposition, in μg As per g of dust fall, of 6 sites are in the range of 0.100(μ0.020)–4.00(μ0.020); site no. 1 industrial area, 0.100(μ0.020)–0.320(μ0.020); site no. 2 residential area, 0.044(μ0.070)–0.337(μ0.030); site no. 3 commercial area, 0.093(μ0.068)–1.870(μ0.020); site no. 4 residential area, 0.111(μ0.020)–1.912(μ0.010); site no. 5 residential area and 0.068(μ0.040)–3.037(μ0.060); site no. 6 heavy traffic area. The total annual flux of As in the fall-out at different zones is in the range 0.033–1.12 kg km-2 yr-1. The month wise collection and analysis of dust fall out rate between 3.0(μ0.10)–91.3(μ1.4) mt (metric tonnes) km-2 month-1 were observed at all 6 sampling sites. Anthropogenic and environmental factors play important roles in the contribution of arsenic in airborne particulate matters. 相似文献