Classification of guppies’ (Poecilia reticulata) gender by computer vision

Labor costs of guppy growers and breeders are largely those of manual sorting (by strain, quality and gender) and counting fish. In most farms, female and male fish are grown together and sold either separately or together. Sorting fish according to gender is important for marketing as well as for breeding programs, so that a device for sorting and counting fish can potentially reduce production costs and improve quality.

A project aiming to develop sorting and counting technologies for ornamental fish growers included development and testing of image-processing algorithms for sorting guppy fish (Poecilia reticulata) by gender. The algorithms are derived from shape and color differences between female and male guppies. An algorithm for the determination of landmarks on fish contours was developed and found to be accurate in accordance with human judgment, enabling extraction of specific shape and color features of the tail and the body.

The algorithms were applied to three sets of images of guppies of the “Red-Blond” strain. Gender identification accuracy was approximately 90% using shape features, approximately 96% using color features and was slightly improved when both color and shape features were used.

Some of the components used are essential for future development of a computer vision based system for sorting and grading ornamental fish by strain and quality.     

Guidance of groups of guppies (Poecilia reticulata) to allow sorting by computer vision

Prior to marketing, ornamental tropical fish are currently sorted, graded and counted manually; a process that is labor intensive, stressful to fish and inaccurate. Manipulation of fish movements at our will is a key element in the development of a device for automatically sorting, grading and counting fish by a computer vision system, and the present study is one step towards the development of such a fish-friendly sorting device. The positive phototactic and rheotactic innate responses of guppies (Poecilia reticulata) were exploited to induce them to swim through transparent pipes or narrow channels, to render them ready for inspection by a computer vision system. Water flow direction and velocity, water level, and illumination were effective in inducing fish to move from one container into the other via a narrow transparent pipe. It was attempted to separate guppies moving in groups into individually spaced fish, by introducing an obstacle into a narrow channel or narrowing the transparent pipe.     

Ultra‐long‐acting recombinant insulin for the treatment of diabetes mellitus in dogs

BackgroundFor the treatment of diabetes mellitus (DM) in dogs, novel insulins with decreased injection frequency while maintaining safety and efficacy are desirable. Insulin fused with immunoglobulin‐fragment‐crystallizable (Fc) has an ultra‐long plasma half‐life because it recycles through cells, protected from proteolysis.HypothesisGlycemic control can be achieved in diabetic dogs with a recombinant fusion protein of a synthetic insulin and canine Fc (AKS‐218d) administered subcutaneously once‐weekly.AnimalsFive client‐owned dogs with naturally occurring DM.MethodsProspective clinical trial in dogs with DM that were recruited from the UC Davis Veterinary Teaching Hospital and local veterinary clinics. Dogs previously controlled using intermediate‐acting insulin q12h were transitioned to once‐weekly injections of a preliminary construct identified as AKS‐218d. The dose of AKS‐218d was titrated weekly for 8 weeks based on clinical response and continuous interstitial glucose monitoring. Clinical signs, body weight, serum fructosamine concentrations, and mean interstitial glucose concentrations (IG) over the preceding week were compared between baseline (before AKS‐218d) and during the last week of treatment. Data were compared using nonparametric paired tests.ResultsOnce‐weekly AKS‐218d, compared to baseline twice‐daily insulin therapy, resulted in no significant changes in clinical signs, median (range) body weight (+0.4 kg [−0.5‐1.1]; P = .6), fructosamine concentration (−75 mmol/L [−215 to +126]; P = .4), or mean IG (+81 mg/dL [−282 to +144]; P = .8). No adverse reactions were reported.ConclusionControl of clinical signs, body weight, and maintenance of glycemia was achieved with this once‐weekly novel insulin construct in 4 of 5 dogs.     

Cyperus rotundus control using a mechanical digger and solar radiation

Cyperus rotundus (purple nutsedge) is considered one of the most noxious weeds affecting agricultural areas worldwide. With its fast growth rate, it competes with annual crops for water, minerals, light and space. It excretes allelopathic materials that impede crop development. Controlling this weed is difficult and is done mostly by manual weeding, cultivation and herbicides, with limited effectiveness. A method was developed for the control of C. rotundus. A machine penetrates the soil and rearranges it, so that the tubers are lifted to the upper soil layer, where they are left exposed to the hot summer climate, dehydrate and die. The method was tested in seven field experiments on various soil types. Two months after the experimental plots were irrigated, 70–100% weed control was observed. The machine's speed (at 1.2 or 1.8 km h^?1) and the number of treatments (one, or two treatments a month apart) did not influence the level of weed control. The method has a very high potential to replace manual weeding and application of herbicides. Further work will test whether the treatment has a long‐term effect or should be repeated every season.     

Triggering a cell shape change by exploiting preexisting actomyosin contractions

Apical constriction changes cell shapes, driving critical morphogenetic events, including gastrulation in diverse organisms and neural tube closure in vertebrates. Apical constriction is thought to be triggered by contraction of apical actomyosin networks. We found that apical actomyosin contractions began before cell shape changes in both Caenorhabitis elegans and Drosophila. In C. elegans, actomyosin networks were initially dynamic, contracting and generating cortical tension without substantial shrinking of apical surfaces. Apical cell-cell contact zones and actomyosin only later moved increasingly in concert, with no detectable change in actomyosin dynamics or cortical tension. Thus, apical constriction appears to be triggered not by a change in cortical tension, but by dynamic linking of apical cell-cell contact zones to an already contractile apical cortex.     

Photodegradation of 3,5,6-trichloro-2-pyridinol in aqueous solution

A medium-pressure mercury lamp, emitting strongly in the 200–400 nm range was applied for the degradation of 3,5,6-trichloro-2-pyridinol (TCP), a hydrolysis product of chlorpyrifos. Photodegradation of TCP in aqueous solution exhibited pseudo-first order kinetics with a rate constant that was wavelength dependent and increased below 300 nm. The TCP degradation rate and quantum yield increased with solution pH up to a constant maximum value of (6.40 ± 0.046) × 10^?3 cm² mJ^{? 1} and 0.178 ± 0.002 mol E^?1 respectively, at pH 5 and above. Addition of 5 mg L^{? 1} H₂O₂ to generate OH radicals led to an increase in removal rates by a factor of 1.5. Addition of phosphate buffer resulted in decreased photolysis at 3 < pH < 6.     

Effects of day length on flowering and yield production of Salicornia and Sarcocornia species

Salicornia is a new vegetable crop that can be irrigated with highly saline water, even at salt concentrations equivalent to full-strength seawater. During leafy vegetable cultivation, the onset of the reproductive phase is an undesired phenomenon that reduces yield and quality and prevents year-round cultivation. Knowledge about the regulation of floral induction in the members of the tribe Salicornieae, however, is lacking. To establish year-round cultivation, we studied the flower induction of five Salicornia and two Sarcocornia varieties. Plants were grown under two day lengths, 13.5 h and 18 h, and harvested by a repetitive harvest regime. A 13.5-h day length prevented flower induction in the Israeli Salicornia varieties, but a longer day length was required to prevent flower induction in two species originating from more northern latitudes. The onset of the reproductive phase under suboptimal short day length conditions severely reduced vegetative growth and yields in Salicornia. In Sarcocornia, the repetitive harvest regime prevented flowering, making it a promising candidate for year-round cultivation. Irrigating the plants with full-strength seawater (electrical conductivity 48 dS m⁻¹) vs. water with moderate salinity (electrical conductivity 10 dS m⁻¹) did not change the general flowering pattern of the studied Salicornieae members.     

Detection of <Emphasis Type="Italic">Potato virus Y</Emphasis> in industrial quantities of seed potatoes by TaqMan Real Time PCR

Potato (Solanum tuberosum) is the largest crop in Israel. Production is based on the import of seed tubers from Europe for the spring crop. Imported tubers are generally free from virus infection. The most important virus infecting potato is Potato virus Y (PVY), which may cause severe damage to marketable yields. In Israel, tubers from the spring harvest are stored over the summer for planting in the autumn. It is important to be able to determine the infection rate of seed tuber lots from the spring harvest prior to storage. Commonly, infection is measured by sprouting tubers and measuring virus titre in the leaves using ELISA (the “Growing-On test”), which takes at least 6 weeks to give results. There is a need for a faster method to produce results, such as Taqman Real Time PCR (qPCR), for direct analysis of viral infection in tubers at harvest. To use qPCR as a diagnostic tool, it is necessary to demonstrate that both techniques give comparable results on batches of field-grown tubers. Such a comparison was performed on potential seed tuber lots of 14 different cultivars over three Israeli spring harvests (2013–2015). The agreement between the results of the two techniques was not of high statistical significance. However, the qPCR technique can distinguish well, by binary classification, between tuber lots with a low PVY infection rate (<5% by Growing On test; suitable for seed) and those unsuitable for seed (≥5% by Growing On test). Therefore, qPCR is an appropriate technique for determination of the PVY infection rate of seed tuber lots in Israel.     

An automatic fishing machine based on acoustic conditioning

An automatic fishing machine based on acoustic conditioning was developed and tested in a reservoir. The floating fishing machine is remotely and automatically controlled to operate an underwater speaker, a feeder and underwater cameras that monitor fish behavior in real time. An open net pen installed under the system can be automatically closed to capture gathering fish. The dynamics of fish populations in the open net pen was monitored and discussed. Fish were conditioned to associate an acoustic signal with food by classical conditioning. Periodic retraining was used to reinforce the conditioned behavior of fish freely swimming in the reservoir. Fish were captured by calling them to the fishing machine using the acoustic signal and automatically closing the net pen around them: 2.5 times more fish were captured in such capture events than in control events, in which the net pen was automatically closed without calling the fish.     

Aerobic bacteria from mucous membranes, ear canals, and skin wounds of feral cats in Grenada, and the antimicrobial drug susceptibility of major isolates

In a 2-year period 54 feral cats were captured in Grenada, West Indies, and a total of 383 samples consisting of swabs from rectum, vagina, ears, eyes, mouth, nose and wounds/abscesses, were cultured for aerobic bacteria and campylobacters. A total of 251 bacterial isolates were obtained, of which 205 were identified to species level and 46 to genus level. A commercial bacterial identification system (API/Biomerieux), was used for this purpose. The most common species was Escherichia coli (N = 60), followed by Staphylococcus felis/simulans (40), S. hominis (16), S. haemolyticus (12), Streptococcus canis (9), Proteus mirabilis (8), Pasteurella multocida (7), Streptococcus mitis (7), Staphylococcus xylosus (7), S. capitis (6), S. chromogenes (4), S. sciuri (3), S. auricularis (2), S. lentus (2), S. hyicus (2), Streptococcus suis (2) and Pseudomonas argentinensis (2). Sixteen other isolates were identified to species level. A molecular method using 16S rRNA sequencing was used to confirm/identify 22 isolates. Salmonella or campylobacters were not isolated from rectal swabs. E. coli and S. felis/simulans together constituted 50% of isolates from vagina. S. felis/simulans was the most common species from culture positive ear and eye samples. P. multocida was isolated from 15% of mouth samples. Coagulase-negative staphylococci were the most common isolates from nose and wound swabs. Staphylococcus aureus, or S. intemedius/S. pseudintermedius were not isolated from any sample. Antimicrobial drug resistance was minimal, most isolates being susceptible to all drugs tested against, including tetracycline.