A genetic linkage map in southern‐by‐spring oat identifies multiple quantitative trait loci for adaptation and rust resistance

We developed 178 recombinant inbred lines from a southern‐by‐spring oat population designated as “TxH.” These lines were genotyped to generate a high‐quality linkage map that resolved 6,902 markers into 21 linkage groups that matched closely with the latest hexaploid oat consensus map. Three major quantitative trait loci (QTLs) affecting heading date were found in locations that are consistent with known QTLs and candidate genes, and two other QTLs affecting heading date were found in novel locations. Five QTLs affecting plant height were found. Both sets of QTLs are responsible for transgressive segregation observed for these two traits. Four QTLs affecting resistance to crown rust, caused by the pathogen Puccinia coronata f. sp. avenae, were identified. Two of these QTLs are consistent with known clusters of rust resistance genes, while two may represent new locations of novel rust resistance genes. A complete set of SNP sequences suitable for generating markers for molecular selection is provided.     

Genital Disorders,Linear and Testicular Characteristics in Menz Rams

Clinical examination, bodily condition score (BCS), heart girth (HG), body length (BL), wither height (WH), and scrotal circumference (SC) were assessed on 486 mature Ethiopian Menz rams, on small farms, in local markets, and at the main abattoir in Addis Ababa from December 1994 to April 1995. Almost 27% of the rams were found to be unfit for breeding. Poor general condition, mainly in the form of respiratory disorders, was seen in 1.2% of the rams. Balanoposthitis, epididymitis and orchitis were the most common pathological conditions, affecting the external reproductive organs in 14.6%, 4.5% and 4.1% of the rams, respectively. Testicular calcification, cysts and testicular haemorrhagic lesions were detected in 4, 6 and 8, respectively, of the 60 rams examined at necropsy. The BCS, HG, BL and WH averaged 2.1±0.5, 67.7±5.0 cm, 60.1±4.5 cm and 60.1±4.3 cm, respectively. The mean SC was 25.5±3.9 cm and did not vary significantly with age (p>0.05). Among the linear body measurements, the highest correlation was between BL and WH (r = 0.66). SC was found to be most closely correlated to HG (r = 0.46). More investigations into the relationship between the present findings and actual fertility, and on their practical application in the selection of rams for breeding is recommended.     

Reproductive Performance of Crossbred Dairy Cows in Different Production Systems in the Central Highlands of Ethiopia

The study was conducted to examine the fertility status of crossbred dairy cows in mixed crop-livestock production (MCLP), market-oriented specialized dairy production (MSDP) and urban dairy production (UDP) systems, including the Holetta Agricultural Research Center (HARC). Data on general farm management variables and reproductive histories were collected from study farms by questionnaire and from individual cow records. Age at first service and age at first calving were 29.58 months (n = 424) and 40.6 months (n = 348), respectively. Cows managed under UDP were younger at first service and at first calving (p<0.05). The mean intervals from calving to first service and to conception were 141.98 days (n = 284) and 185.02 days (n = 219), respectively. The mean calving interval for cows was 551.82 days (n = 258). Cows in MCLP had longer intervals from calving to first service and to conception and longer calving intervals than those managed under MSDP, UDP and HARC. First service conception rate (43.42%), number of services per conception (1.75) and pregnancy rate (79.29%) did not differ significantly between production systems. Reproductive performance was best in UDP followed by HARC and MSDP. The difference between MCLP and the rest points to particular difficulties in that system. To improve reproductive performance and economic benefit, there should be conservative stocking rate, sensible year-round feeding, a herd health plan, and sustainable extension service.     

Studies on seasonal dynamics of ticks of ogaden cattle and individual variation in resistance to ticks in eastern Ethiopia

In this study the dominant tick species identified were Amblyomma cohaerens 52.2%, Rhipicephaluspravus 19.3% and A. variegatum 14.6%. A. cohaerens occurred throughout the sampling period and showed a peak during March. Their number declined significantly (P < 0.01) from August to December. R. pravus occurred from July to December only and peaking in September (P < 0.01). A. variegatum occurred in low numbers throughout the study period with a marked seasonal variation (P < 0.01) and abundant numbers of ticks were observed from May to July. The other tick species identified were Boophilus decoloratus, R. bergeoni and R. evertsi evertsi. Individual variation in tick infestation level was observed among the animals (P < 0.05). Since all the animals were of the same breed, age group and were managed similarly the selection of animals with low infestation level can be a component of tick control strategy.     

Tree planting for poverty reduction in less-favoured areas of the Ethiopian highlands

This paper assesses the potential impact of planting of eucalypt trees as a strategy to reduce poverty in a less-favoured area of the highlands of Ethiopia. Results from simulations with a bio-economic model for a less-favoured case study area in the highlands are combined with survey data at community, household and plot level to assess how general the results of the bio-economic model are. Application of the bio-economic model shows clearly that land degradation, population growth, stagnant technology and drought threaten food security. Household welfare and land quality are deteriorating rapidly in the area and interventions are urgently needed to avoid human disaster. Planting of eucalypts on land unsuitable for crop production may substantially increase household incomes if market outlets for trees can be found. Tree planting will not have severe negative effects on food production or land conservation. A policy combining promotion of tree planting and conservation of cropland may achieve win-win benefits in terms of increased household incomes as well as more sustainable land-use. Analysis of survey data from the Amhara Region of Ethiopia reveals that there is a large area of land that is unsuitable for crop production located close to all-weather roads in the less-favoured areas of the region. Few trees have been planted on this type of land up to now. The past policy seems to have discouraged tree planting except on homestead plots that are more suitable for food crops. This paper reports part of the IFPRI/ILRI project ‘Policies for Sustainable Land Management in the East African Highlands’. These two agencies have provided funds and logistical support for the work. The Norwegian Ministry of Foreign Affairs has provided funds for this research in the Amhara Region in Ethiopia. The authors also draw on earlier work funded by Research Council of Norway. Any correspondence should be directed to the first author.     

Molecular characterization of Newcastle disease viruses isolated from rural chicken in northwest Ethiopia reveals the circulation of three distinct genotypes in the country

Newcastle disease (ND) is a highly contagious disease that affects many species of birds and causes significant economic losses to the poultry industry worldwide. Fifteen Newcastle disease virus (NDV) isolates obtained from rural chickens in northwest Ethiopia in 2011 and 2012 were characterized genotypically. The main functional region of the F gene was amplified and sequenced (260 nucleotides). Among the Ethiopian NDV isolates, 2 isolates had the virulent motif ¹¹²R-R-Q-K-R-F¹¹⁷ at the cleavage site of the fusion protein while 13 isolates contained the lentogenic motif ¹¹²G-G/R-Q-G-R-L¹¹⁷. Phylogenetic analysis based on the variable region of the F gene indicated that the two isolates exhibiting the virulent motif belonged to lineage 5 (genotype VII) subgenotype d and the remaining 13 isolates were grouped into lineage 2 (genotype II). The nucleotide sequences of lineage 5 isolates were genetically related to the Sudanese NDV isolates, suggesting potential epidemiological link of ND outbreaks between neighbouring countries. The lentogenic strains shared similarities with La Sota vaccine strain and probably originated from the vaccine strain either through direct exposure of birds to the live vaccine or to infectious La Sota-like strains circulating in rural poultry. This study provides genetic evidence on the existence of different NDV genotypes circulating in the rural poultry in Ethiopia. The virulent NDV continues to be a problem in poultry sector in Ethiopia, and their continuous circulation in rural and commercial poultry calls for improved surveillance and intensified vaccination and other control measures.     

Plant Diversity and Vegetation Structure in Encroached and Non-encroached Areas of Borana Rangelands： The Case of Hallona and Medhacho Pastoralist Associations

The Borana rangelands are important areas of cattle production in Ethiopia. However, these rangelands are threatened by the increasing changes in the natural vegetation from grass and forbs dominated into unpalatable bushy woody vegetation resulting in the loss of some of the highly desirable grass species. This study was conducted to assess the impacts of bush encroachment on the biodiversity, structure and cover of the native vegetation in bush encroached and non-encroached sites. Vegetation data were collected from both sites by laying quadrate plots along transects using a systematic sampling method. According to the results, higher number of species was recorded in the non-encroached sites than that in the encroached sites. The diversity indices for the non-encroached and the encroached sites were 3.16 and 2.67, respectively. The abundance and cover analysis indicated that there was high density and cover of herbaceous species in the non-encroached site. There was a significantly higher density of woody species cover in the encroached site. Generally, the bush encroachment in the Borana rangelands has hampered the diversity of the native vegetation, particularly the grasses and forbs and reduced the ground cover, exposing large parts of the rangelands for soil erosion and other degradation process.     

Mastitis in lactating camels (Camelus dromedarius) in Afar Region, north-eastern Ethiopia.

Quarter milk samples (n = 543) from 152 traditionally managed lactating camels (Camelus dromedarius) in Afar Region, north-eastern Ethiopia were examined to determine the prevalence of camel mastitis and identify its bacterial causes. Out of 152 camels examined, 19 (12.5%) were diagnosed as clinical mastitis cases based on clinical signs and bacteriological examinations. Of the 257 California Mastitis Test (CMT) positive quarter milk samples 162 (63.0%) yielded pathogenic bacteria. A positive correlation was observed between CMT positive results and presence of major pathogens in camel milk samples. The main mastitis pathogens isolated were Staphylococcus aureus, coagulase-negative staphylococci, Streptococcus agalactiae, S. dysgalactiae, and other species of streptococci, Pasteurella haemolytica and E. coli. Results of the present study suggest that mastitis in Afar camels is prevalent, Gram-positive cocci are the major isolates from camel milk samples and the CMT can be used as a screening test for the detection of mastitis in camels.     

Effect of source germplasm and season on the in vivo haploid induction rate in tropical maize

For in vivo production of doubled haploid (DH) lines in maize, the rate of haploid induction is of crucial importance. Maternal haploid induction depends primarily on the inducer used as a pollinator. However, the source germplasm used as a maternal parent and the environmental conditions for induction may also influence haploid induction and these aspects have not been examined in tropical maize so far. The objectives of our study were to (i) monitor the variation for haploid induction rate (HIR) among diverse source germplasm in tropical maize, (ii) determine the relative importance of general (GCA) and specific (SCA) combining abilities for HIR, and (iii) investigate the influence of summer and winter seasons and genotype × season interactions on this trait. Ten inbreds were mated in a half diallel design. The resulting 45 F₁ single crosses were pollinated with the haploid inducer hybrid RWS × UH400 during the summer 2008 and winter 2009 seasons in a lowland tropical environment in Mexico. HIR of the single crosses averaged over seasons ranged from 2.90 to 9.66% with an overall mean of 6.74%. Mean HIR was significantly (P < 0.01) higher during the winter (7.37%) than summer season (6.11%). Significant (P < 0.01) variation was observed due to GCA effects of parental inbreds of single crosses but not for SCA, GCA × season and SCA × season interactions. Our study underpins that a higher HIR in tropical maize can be obtained by selecting appropriate source germplasm and undertaking pollination under favorable environmental conditions.