Growth changes in bighand thornyhead <Emphasis Type="Italic">Sebastolobus macrochir</Emphasis> off the Pacific coast of northern Honshu,Japan

ABSTRACT:     The biomass of bighand thornyhead Sebastolobus macrochir was increased by the high recruitment success of the 1999–2002 year classes off the Pacific coast of northern Honshu, Japan. In this study, the growth of bighand thornyhead was examined over a 9-year period from 1996 to 2004 in this area. The growth of the 1999 year class and the 2000–2002 year classes was reduced at 3 and 2 years old, respectively, while the 1999–2002 year classes were smaller than the 1993–1998 year classes. In 2-, 3- and 4-year-old fish, the relationship between abundance and mean standard length was expressed by negative linear regressions, while fish became smaller when abundance of the year class was larger. Mean bottom temperatures were stable at depths of 350–900 m; variations in water temperature were small in the main distribution area of bighand thornyhead. We discuss the factors affecting the growth of bighand thornyhead via changes in the demersal fish community and feeding habits.     

At5g54160 gene encodes <Emphasis Type="Italic">Arabidopsis thaliana</Emphasis> 5-hydroxyconiferaldehyde <Emphasis Type="Italic">O</Emphasis>-methyltransferase

The function of an Arabidopsis thaliana gene, At5g54160 annotated as a caffeic acid O-methyltransferase CAOMT gene was characterized. The recombinant enzyme of this gene (AtOMT1) catalyzed the O-methylation of phenylpropanoid and flavonoid substrates. The specificity constants (k _cat/K _m) for 5-hydroxyconiferaldehyde (5-HCAld) and quercetin were both 0.11 μM⁻¹·min⁻¹. On the other hand, lignins of At5g54160-knockout Arabidopsis mutants lacked syringyl units. In addition, we showed that the gene silencing also resulted in significant accumulation of caffeyl alcohol (CaAlc). These results strongly suggested that At5g54160 gene is involved in syringyl lignin synthesis for the methylation of both 5-hydroxyconiferaldehyde and 3,4-dihydroxyphenyl compound(s). Part of this work was presented at the Annual Meeting of Japan Society for Bioscience, Biotechnology, and Agrochemistry, March 24–27, 2007     

Length of Incubation for the Estimation of the Most Probable Number of Nitrifying Bacteria in Soil

Abstract

The Zn content in 8 soil chemical fractions was determined for 21 greenhouse soils and for 8 reference (open field) soils from Kochi Prefecture, Japan to investigate the forms of spontaneously accumulated Zn in the greenhouse soils associated with heavy application of fertilizers and manures. Sequential extraction method was applied to every soil and each Zn fraction was designated as exchangeable (Ex-Zn), Pb-displaceable (Pb-Zn), acid soluble (Aci-Zn), Mn oxide-occluded (MnO-Zn), organically bound (OM-Zn), amorphous Fe oxide-occluded (AFeO-Zn), crystalline Fe oxide-occluded (CFeO-Zn), and residual (Res-Zn) fractions. The Zn content of the greenhouse soils was significantly higher than that of the reference soils in every fraction, except for the CFeO-Zn, and Res-Zn fractions. The Pb-Zn, Aci-Zn, and MnO-Zn fractions showed a difference of more than 60% in the total Zn content between the two soil groups. The amounts of Zn extracted in the Pb-Zn, Aci-Zn, MnO-Zn, AFeO-Zn, and CFeO-Zn fractions of the greenhouse soils increased con-comitantly with the accumulation of applied macro-nutrients. These results indicated that the accumulation of Zn in greenhouse soils caused by intensive fertilization had proceeded through specific adsorption onto or occlusion by the oxides and hydroxides of Fe and Mn in soils.     

Bacteriological studies on the mineralization of organic nitrogen in paddy soils

In this report we studied the effects of mechanical grinding of paddy soils on nitrogen mineralization and bacterial number when soils were incubated under a submerged condition after grinding.

Nitrogen mineralization was increased by grinding soil samples as compared with those without grinding. The value of (Nd-Nu)/Nu, where Nd is the amount of ammonia-nitrogen formed by incubation of disrupted samples and Nu those of the undisrupted soils, was in good correlation with clay/humus ratio.

Although significant difference was not observed between the number of aerobic bacteria with undisrupted and disrupted soil samples, higher anaerobic bacterial numbers were found with disrupted than with undisrupted ones.

A significant correlation was also obtained between the amounts of nitrogen mineralization increased by the grinding of soil and the numbers of anaerobic bacteria.     

Silicon Application by Sorghum Through the Alleviation of Stress-Induced Increase in Hydraulic Resistance

In this study, it was verified whether silicon (Si) affected plant hydraulic resistance, which was one of the significant factors affecting water uptake. Sorghum bicolor (L.) Moench. was grown hydroponically under varying silicon levels and exposed to osmotic stresses. Under osmotic stress, reduction in growth, photosynthesis, and transpiration were alleviated as supplied silicon levels increased. These alleviative effects were ascribed to enhancement of water uptake. Although shoot/root ratio was not affected by silicon, estimated apparent hydraulic resistance was lower in silicon-supplied sorghum than silicon-deficient one under osmotic stress. Simultaneous measurement of transpiration and water uptake rates indicated that under osmotic stress silicon-deficient sorghums showed unbalanced water relation that transpiration rate exceeded water uptake rate, while they were balanced in silicon-supplied sorghums. The results indicated that silicon improved hydraulic resistance, allowing sorghum to avoid from decrease in water uptake rate that happens to silicon-deficient sorghum under water stress.     

Functional changes in beta-lactoglobulin by conjugation with cationic saccharides

Bovine beta-lactoglobulin (beta-LG) was conjugated to each of three cationic saccharides [glucosamine (GlcN), chitopentaose (CPO), and chitosan (CHS)] by means of a water-soluble carbodiimide or by the Maillard reaction in an effort to improve the functional properties of beta-LG. The molar ratios of beta-LG to the cationic saccharide in the beta-LG-GlcN, beta-LG-CPO, and beta-LG-CHS conjugates were 2:1, 2:5, and 2:1, respectively. Fluorescence studies indicated that the conformation around Trp had changed in each conjugate and that the surface of each of the conjugates was covered with a saccharide chain. Structural analysis using monoclonal antibodies indicated that the conformation around (15)Val-(29)Ile (beta-sheet region) in beta-LG-GlcN and beta-LG-CPO had changed but that in beta-LG-CHS was maintained, whereas the conformation around (125)Thr-(135)Lys (alpha-helix region) in the conjugates had changed. The emulsifying activity of beta-LG was improved by conjugation with CPO or CHS, and aggregation of beta-LG was suppressed by conjugation with CHS. Reduction of the antigenicity and immunogenicity of beta-LG was achieved by conjugation with CHS.