A framework for evaluation of on-farm mastitis diagnostics in Australia

Numerous culture-based diagnostics are available on the Australian and international markets for on-farm detection of bacterial pathogens in milk. Use of such diagnostics may provide an opportunity to improve the prudent use of antimicrobials in udder health management. Farms are low-resource settings in terms of diagnostic microbiology capacity. The World Health Organisation has identified criteria for the evaluation of diagnostic tests in low resource settings based on Accuracy, Sensitivity, Specificity, User-friendliness, being Rapid or Robust, Equipment-free and being Deliverable (ASSURED). Here, we review how those criteria can be interpreted in the context of microbiological diagnosis of mastitis pathogens, and how on-farm diagnostics that are currently available in Australia perform relative to ASSURED criteria. This evaluation identifies multiple trade-offs, both with regard to scientific criteria and with regards to convenience criteria. More importantly, the purpose of testing may differ between farms, and test performance should be evaluated relative to its intended use. The ability of on-farm mastitis diagnostics to inform mastitis treatment decision-making in a timely and cost-effective manner depends not just on test characteristics but also on farm-specific pathogen prevalence, and on the farm enterprise's priorities and the farm manager's potential courses of action. With most assay evaluations to date conducted in professional laboratories, there is a surprising dearth of information on how well any of the diagnostic tests perform on-farm and, indeed, of the on-farm decision-making processes that they aim to inform.     

A Parametric Transfer Function for Grain-Flow Within a Conventional Combine Harvester

Grain yield monitoring is an integral tool in the Precision Agriculture management system. When used in conjunction with a satellite-based navigation system, it provides spatial information on output variability, output response to managed inputs and is used to identify limiting resources in the crop production process. Accurately matching measured yield quantities with spatial units within a field is therefore important. At present, a simple linear time shift is employed by all commercial monitoring systems to account for the delay between GPS recorded positions and subsequent yield measurements. This study examines the internal process of grain transport to the sensor by monitoring the flow of strategically coloured grain. The flow is shown to be significantly influenced by mixing induced by threshing and auger transport processes. In contrast to the common assumption that grain moves as a spatially related cohort through to the sensor, the results suggest that a diffusion process is more realistic. A parametric model for the diffusion process is provided which suggests that from each individual yield measurement a maximum 20% of the mass could be assigned to a single spatial unit of the size that is typically allocated. The results imply that for further analyses, the inconclusive spatial origin and artificially smoothed quantities of instantaneous yield measurements should be considered.