A framework for evaluation of on-farm mastitis diagnostics in Australia

Numerous culture-based diagnostics are available on the Australian and international markets for on-farm detection of bacterial pathogens in milk. Use of such diagnostics may provide an opportunity to improve the prudent use of antimicrobials in udder health management. Farms are low-resource settings in terms of diagnostic microbiology capacity. The World Health Organisation has identified criteria for the evaluation of diagnostic tests in low resource settings based on Accuracy, Sensitivity, Specificity, User-friendliness, being Rapid or Robust, Equipment-free and being Deliverable (ASSURED). Here, we review how those criteria can be interpreted in the context of microbiological diagnosis of mastitis pathogens, and how on-farm diagnostics that are currently available in Australia perform relative to ASSURED criteria. This evaluation identifies multiple trade-offs, both with regard to scientific criteria and with regards to convenience criteria. More importantly, the purpose of testing may differ between farms, and test performance should be evaluated relative to its intended use. The ability of on-farm mastitis diagnostics to inform mastitis treatment decision-making in a timely and cost-effective manner depends not just on test characteristics but also on farm-specific pathogen prevalence, and on the farm enterprise's priorities and the farm manager's potential courses of action. With most assay evaluations to date conducted in professional laboratories, there is a surprising dearth of information on how well any of the diagnostic tests perform on-farm and, indeed, of the on-farm decision-making processes that they aim to inform.     

Variability in the composition of lupin (Lupinus angustifolius) meals influences their digestible nutrient and energy value when fed to rainbow trout (Oncorhynchus mykiss)

Over a series of seven separate experiments 76 different lupin (Lupinus angustifolius) meals were assessed for their digestible dry matter, protein, amino acid and energy characteristics when fed to rainbow trout. Two reference diets (a common basal diet and a reference lupin meal) were also included in each experiment. Minimal variance in the digestibility parameters of both reference diets was observed among the experiments ensuring that there was a high degree of robustness in the across-experiment evaluations. Using simple and multiple-regression techniques, principal diet and ingredient composition factors affecting diet and ingredient digestibilities and ingredient digestible values were explored within the dataset. Using simple linear regression, it was shown that nitrogen digestibility of the lupin meals was negatively influenced by ingredient lignin content, but positively affected ingredient protein (N × 6.25) content. The energy digestibility of the lupin meals was positively affected by a range of compositional features including protein, sum of amino acids and negatively affected by carbohydrate content. The digestible nutrient and energy content of the meals reflected the combined effects of both ingredient digestibilities and ingredient composition. The digestible nitrogen content of the lupin meals was positively affected by protein (N × 6.25), sum of amino acids and energy content, but was negatively affected by lignin and carbohydrate content. The digestible sum of amino acids was also positively affected by protein, sum of amino acids, but only negatively affected by carbohydrate content, not lignin content. The digestible energy content of the lupin meals was also positively affected by protein, sum of amino acids and their own energy density, but only negatively affected by carbohydrate content. Multiple linear regression modelling supported that together ingredient protein and lignin content were the strongest predictors of digestible protein value, explaining close to 60% of the variability in this parameter. Discrete reassessment of these relationships using non-linear analysis methods provided a stronger interpretation of the ingredient composition effects. In recognition of this, a functional model including terms for ingredient protein and lignin content on the digestible protein value was defined. This study demonstrates that within one raw material type that not only does significant variability in the digestible value of the raw materials exist, but that it is possible to identify compositional features of that raw material that are intrinsically influencing their own digestible value.     

Plants as de-worming agents of livestock in the Nordic countries: historical perspective, popular beliefs and prospects for the future.

Preparations derived from plants were the original therapeutic interventions used by man to control diseases (including parasites), both within humans and livestock. Development of herbal products depended upon local botanical flora with the result that different remedies tended to develop in different parts of the world. Nevertheless, in some instances, the same or related plants were used over wide geographic regions, which also was the result of communication and/or the importation of plant material of high repute. Thus, the Nordic countries have an ancient, rich and diverse history of plant derived anthelmintic medications for human and animal use. Although some of the more commonly used herbal de-wormers were derived from imported plants, or their products, many are from endemic plants or those that thrive in the Scandinavian environment. With the advent of the modern chemotherapeutic era, and the discovery, development and marketing of a seemingly unlimited variety of highly efficacious, safe synthetic chemicals with very wide spectra of activities, herbal remedies virtually disappeared from the consciousness--at least in the Western world. This attitude is now rapidly changing. There is a widespread resurgence in natural product medication, driven by major threats posed by multi-resistant pest, or disease, organisms and the diminishing public perceptions that synthetic chemicals are the panacea to health and disease control. This review attempts to provide a comprehensive account of the depth of historical Nordic information available on herbal de-wormers, with emphasis on livestock and to provide some insights on potentially rewarding areas of "re-discovery" and scientific evaluation in this field.     

Are Endocrine Disrupting Compounds a Threat to Farm Animal Health,Welfare and Productivity?

Contents The sources and characteristics of endocrine disrupting compounds (EDCs) are reviewed and discussed with respect to their potential effects on farm animal health, welfare and productivity. The importance of certain properties of these compounds in relation to the expression of their biological effects is addressed together with potential routes of exposure. It is concluded that little is known of factors affecting the tissue concentrations of EDCs in farm animals, the concentrations that are required to perturb physiological function in these species, the effects of prolonged exposure to low doses, the effect of cocktails of EDCs and other pollutants or the responses of specific organs and physiological systems that are affected by EDCs. Much of the available information pertaining to EDCs is derived from epidemiological studies of wildlife species and from laboratory animal studies and while these studies have significant limitations, they are considered to be valuable indicators of potential effects in farm animal species. The results of such studies, together with the small amounts of data from studies of ruminants, indicate that there may be significant effects of exposure to environmental levels of EDCs on farm animal health, even although effects are not generally apparent in practice, at this time.     

Comparative Expression Analysis of Gametogenesis‐Associated Genes in Foetal and Adult Bubaline (Bubalus bubalis) Ovaries and Testes

This study was conducted to identify and analyse the expression of gametogenesis‐associated genes and proteins in foetal and adult buffalo gonads of both the sexes. Relative quantification of the genes was determined by qPCR and Western blotting. Immunohistochemistry was also performed for various gametogenesis‐associated proteins in foetal and adult gonads of both the sexes. We observed significantly (p < 0.05) increased expression of primordial germ cell‐specific, meiotic as well as genes associated with oocyte maturation and development in foetal ovaries as compared to the adult ones. However, significantly (p < 0.05) increased expression of proteins associated with oocyte maturation like GDF9 and ZP4 was found in adult ovaries, indicating temporal regulation of mRNA translation during oogenesis. Meiotic genes showed significantly (p < 0.05) increased expression in adult testes as compared to foetal testes and ovaries, indicating onset of meiosis at a later stage in spermatogenesis. In general, the expression of primordial germ cell‐associated as well as meiotic genes was higher in adult testes, indicating the increased biological activity in the organ. Immunohistochemistry revealed localized expression of gametogenesis‐associated proteins in ovarian follicles and seminiferous tubules of testes, while the surrounding somatic tissues were devoid of these proteins. The study gives an understanding of the sequential and temporal events of gene expression as well as mRNA translation during male and female gametogenesis. It could also be concluded that follicles and seminiferous tubules are the functional units of the female and male gonads, respectively, and their function could be enhanced by appropriate chemical and genetic intervention of the somatic tissue immediately surrounding them. This assumes importance in the context that buffalo attains sexual maturity at an older age of 2–3 years and have smaller ovaries with lesser number of primordial follicles in comparison with cattle, which is suggested to be the main reason of their poor breeding performance.     

Dynamics of microbial biomass and soil fauna in two contrasting soils cropped to barley (Hordeum vulgare L.)

Summary This study compared the dynamics of shoots, roots, microbial biomass and faunal populations in two different soils cropped to barley. The dynamics of microbial C, protozoa, nematodes, acari, collembola, shoot and root mass were measured between July and October under barley at Ellerslie (Black Chernozem, Typic Cryoboroll) and Breton (Gray Luvisol, Typic Cryoboralf) in central Alberta. Very wet soil conditions in early July reduced the barley yield at Breton. The peak shoot mass was greater at Ellerslie (878 g m^–2) compared to Breton (582 g m^–2), but the root mass did not differ significantly between sites. Microbial C at 0–30 cm depth was greater at Ellerslie (127 g m^–2) than Breton (68 g m^–2). The average protozoa population (no. m^–2) did not differ significantly between sites. The average nematode population at 0–20 cm depth was greater at Ellerslie (5.1 × 10⁶ no. m^–2) compared to Breton (1.0 × 10⁶ no. m^–2) Acari and collembola populations at 0–10 cm depth at Ellerslie (43 × 10³ and 43 × 10² no. m^–2), respectively) were greater than at Breton (2 × 10⁴ and 9 × 10² no. m^–2) respectively). Tenday laboratory incubations of 0–10 cm soil samples from Ellerslie evolved more CO₂-C (120 g g^–1 soil) compared to samples from Breton (97 g g^–1 soil), but the CO₂-C evolution did not differ when expressed on an area basis (g m^–2) due to the greater soil bulk density at Breton. The soil from Breton respired twice as much CO₂-C when expressed as a proportion of soil C and 1.5 times as much CO₂-C when expressed as a proportion of microbial C, compared to the soil from Ellerslie. The greater CO₂-C: microbial C ratio, lower flush C:N ratio, and greater protozoa population: soil C ratio at Breton compared to Ellerslie suggest that the food web was relatively more active at Breton and was related to greater C availability and water availability at Breton.     

A Chemoautotrophically Based Cave Ecosystem

Microbial mats discovered in a ground-water ecosystem in southern Romania contain chemoautotrophic bacteria that fix inorganic carbon, using hydrogen sulfide as an energy source. Analysis of stable carbon and nitrogen isotopes showed that this chemoautotrophic production is the food base for 48 species of cave-adapted terrestrial and aquatic invertebrates, 33 of which are endemic to this ecosystem. This is the only cave ecosystem known to be supported by in situ autotrophic production, and it contains the only terrestrial community known to be chemoautotrophically based.     

Growth of SiO2 at room temperature with the use of catalyzed sequential half-reactions

Films of silicon dioxide (SiO2) were deposited at room temperature by means of catalyzed binary reaction sequence chemistry. The binary reaction SiCl4 + 2H2O --> SiO2 + 4HCl was separated into SiCl4 and H2O half-reactions, and the half-reactions were then performed in an ABAB ellipsis sequence and catalyzed with pyridine. The pyridine catalyst lowered the deposition temperature from >600 to 300 kelvin and reduced the reactant flux required for complete reactions from approximately 10(9) to approximately 10(4) Langmuirs. Growth rates of approximately 2.1 angstroms per AB reaction cycle were obtained at room temperature for reactant pressures of 15 millitorr and 60-second exposure times with 200 millitorr of pyridine. This catalytic technique may be general and should facilitate the chemical vapor deposition of other oxide and nitride materials.