QTL Analysis for Grain Iron and Zinc Concentrations in Two O. nivara Derived Backcross Populations

Identification of quantitative trait loci (QTLs) for grain mineral elements can assist in faster and more precise development of micronutrient dense rice varieties through marker-assisted breeding. In the present study, QTLs were mapped for Fe and Zn concentrations in two BC₂F₃ mapping populations derived from the crosses of O. sativa cv Swarna with two different accessions of O. nivara. In all, 10 and 8 QTLs were identified for grain Fe and Zn concentrations in population 1, and 7 and 5 QTLs were identified in population 2, respectively. Eighty percent of the QTLs detected in both populations were derived from O. nivara. Five QTLs for Fe and three QTLs for Zn explained more than 15% phenotypic variance either in interval or composite interval mapping. The locations of O. nivara derived QTLs such as qFe2.1, qFe3.1, qFe8.2 and qZn12.1 were consistently identified in both the populations. Epistatic interaction was observed only between RM106 and RM6 on chromosome 2 and between RM22 and RM7 on chromosome 3 for Fe concentration in population 1. Sixteen candidate genes for metal homeostasis were found to co-locate with 10 QTLs for Fe and Zn concentrations in both the populations. Most of the Fe and Zn QTLs were found to co-locate with QTLs for grain yield and grain quality traits. Some of the major effect QTLs identified can be used to improve rice grain Fe and Zn concentrations.     

Social isolation of goats: significance of visual contact with conspecifics on behavioral and physiological responses

Social isolation can increase distress in goats, particularly when they cannot maintain visual contact with conspecifics. This experiment was conducted to determine the behavioral and physiological responses in goats during isolation with or without visual contact with conspecifics. Male Spanish goats (uncastrated, 8 mo old, average weight 29.4 ± 0.59 kg) were randomly assigned to a control (CO) group with no isolation or to one of four isolation treatment (TRT) pens (1.5 × 1.5 m) with: 1) open grill panels but with no visual contact with conspecifics (IO), 2) covered grill to prevent visual contact (IC), 3) open grill with visual contact (IV), or 4) covered grill with a 30 × 30 cm window to allow visual contact (IW), for 90 min of social isolation (n = 12 goats per TRT). Blood samples were collected at 0, 30, 60, and 90 min (Time) from isolated and control goats. The experiment was repeated 1 wk later using the same animals, with each goat being subjected to the same isolation TRT the second time to study the effect of prior exposure to isolation. Friedman’s two-way analysis of variance by Ranks test in SAS showed that the median frequency of vocalization (rank score) in goats was high in the IO group, low in the IV and IW groups, and intermediate in the IC group (P < 0.01). The vocalization rank score was also higher (P < 0.01) during the first 30 min of isolation in goats. The median frequency of visual contact was higher in the IW group than in the IV group (P < 0.01). The frequency of climbing behavior was high in the IC and IO groups, low in the IV group, and intermediate in the IW group (P < 0.01). Repeated measures analysis using general linear models procedures in SAS revealed that plasma cortisol and glucose concentrations tended (P < 0.1) to be the highest in the IO group than in CO, IC, IV, and IW groups. Cortisol levels were also higher (Time; P < 0.05) at 0 and 90 min compared with 30 and 60 min. Norepinephrine concentrations decreased (P < 0.05) with Time, and plasma nonesterified fatty acid (NEFA) levels were affected by TRT × Time interaction (P < 0.01). Overall, epinephrine, norepinephrine, glucose, and NEFA concentrations were lower (P < 0.01) and cortisol concentrations and lymphocyte counts were higher (P < 0.01) when goats were exposed to isolation the second time. The results showed that goats with no visual contact with conspecifics during social isolation had greater physiological stress responses and spent more time vocalizing or trying to escape the pen, which may indicate distress.