Pocono mesic till barrens in retreat: topography,fire and forest contagion effects

The Pocono mesic till barrens (PMTB) are a unique assemblage of fire-maintained shrub communities that support numerous rare species. Historically these barrens covered a large area in the vicinity of Long Pond, Pennsylvania, USA. However, due largely to regional fire suppression instituted in the early 1960s, over 70% of the area covered by barrens succeeded to fire-intolerant forest that does not support the rare species. We investigated the influence of forest proximity on barrens succession across three geomorphic types during periods of high fire frequency and fire suppression, testing the hypothesis that forest processes such as seed rain, shading, and detrital enrichment of soils enhances barrens succession through a contagion effect. Evidence of a forest contagion effect should be shown by increased rates of barrens succession with increasing proximity to the nearest forest edge. In order to detect a forest contagion effect, barrens persistence and barrens succession were modeled in proximity zones of 0-50 m, 50-100 m, 100-200 m, and greater than 200 m from the nearest forest edge. We used existing GIS data layers for fire, geomorphology, and vegetation distribution in 1938, 1963, and 1992. The layers were modified and overlain using ArcView software to determine persistence and succession rates for each unique combination of layers in each proximity zone from 1938 to 1963 (pre-fire suppression) and 1963 to 1992 (post-fire suppression). ANCOVA results indicate that proximity to the nearest forest edge significantly affected barrens persistence rates in both time periods, but succession rates were significantly affected in 1938 to 1963 only. Twenty-eight percent of the 1938 barrens succeeded to forest by 1963; 56% of the 1963 barrens became forest by 1992. Results support previous findings that barrens persistence is enhanced by increased fire frequency, and that barrens persist longer where they overlie flat glacial till than on other geomorphology types.     

猪生物医学模型的基因组学研究进展

本综述对猪生物医学模型的多样性和基因组学在这些模型持续开发中的重要性作了一个简要的更新。由于猪在体型大小、生理条件、器官发育和疾病发展等方面与人类相似,因而已作为一种重要的哺乳动物医学模型为人类所用。将猪作为人类医学模型,可以使研究人员从容不迫地安排研究时间,并可利用普通的人类医学技术对机体内部的血管和器官进行成像处理,且可以采集重复的外周样本,并且在扑杀后可采集复杂的粘膜组织样本。以猪为医学模型,能够利用同窝的猪或克隆猪和转基因猪,因而使比较分析和遗传作图更为容易。以猪作为人类医学的动物模型可获得大量代表各种组织的分化方向明确的细胞系,从而可更加有利于基因表达和药物敏感性的检测。因此,对人而言,猪是一种出色的生物医学模型。由于猪在基因序列和染色体结构上与人类高度同源,因而对基因组应用而言,其不失为一个宝贵的资源。由于目前猪基因组序列已被人类充分掌握,因而有改良型遗传学方法和蛋白质组学方法可供这些比较分析方法所利用。本综述将论述用于探测这些模型的基因组学方法中的某些方法,并将重点介绍黑色素瘤和抗传染性疾病的基因组学研究情况,论述在设计此类研究时应予以考虑的问题。本文最后将对利用基因组学方法开发控制具有最高经济价值的猪病—猪繁殖与呼吸综合征病毒(Porcine Reproductive and Respiratory Syndrome,PRRSV)—新型替代方法的可行性、和将从PRRSV研究中获得的知识应用到人传染性疾病研究中的可行性作简短讨论。     

Assessing wild bees in perennial bioenergy landscapes: effects of bioenergy crop composition,landscape configuration,and bioenergy crop area

Context

Wild bee populations are currently under threat, which has led to recent efforts to increase pollinator habitat in North America. Simultaneously, U.S. federal energy policies are beginning to encourage perennial bioenergy cropping (PBC) systems, which have the potential to support native bees.

Objectives

Our objective was to explore the potentially interactive effects of crop composition, total PBC area, and PBC patches in different landscape configurations.

Methods

Using a spatially-explicit modeling approach, the Lonsdorf model, we simulated the impacts of three perennial bioenergy crops (PBC: willow, switchgrass, and prairie), three scenarios with different total PBC area (11.7, 23.5 and 28.8% of agricultural land converted to PBC) and two types of landscape configurations (PBC in clustered landscape patterns that represent realistic future configurations or in dispersed neutral landscape models) on a nest abundance index in an Illinois landscape.

Results

Our modeling results suggest that crop composition and PBC area are particularly important for bee nest abundance, whereas landscape configuration is associated with bee nest abundance at the local scale but less so at the regional scale.

Conclusions

Strategies to enhance wild bee habitat should therefore emphasize the crop composition and amount of PBC.

     

Effect of allele combinations at Ppd-1 loci on durum wheat grain filling at contrasting latitudes

Flowering time is the most critical developmental stage in wheat, as it determines environmental conditions during grain filling. Thirty-five spring durum genotypes carrying all known allele variants at Ppd-1 loci were evaluated in fully irrigated field experiments for three years at latitudes of 41°N (Spain), 27°N (northern Mexico) and 19°N (southern Mexico). Relationships between weight of central grains of main spikes (W) and thermal time from flowering to maturity were described by a logistic equation. Differences in flowering time between the allele combination causing the earliest (GS100/Ppd-B1a) and the latest (Ppd-A1b/Ppd-B1a) flowering were 7, 20 and 18 days in Spain, northern Mexico and southern Mexico, respectively. Flowering delay drastically reduced the mean grain filling rate (R) and W at all sites. At autumn-sowing sites, an increase of 1°C in mean temperature during the first half of the grain filling period decreased W by 5.2 mg per grain. At these sites, W was strongly dependent on R. At the spring-sowing site (southern Mexico), W depended on both R and grain filling duration. Our results suggest that incorporating the allele combinations GS100/Ppd-B1a and GS105/Ppd-B1a (alleles conferring photoperiod insensitivity) in newly released varieties can reduce the negative effects of climate change on grain filling at the studied latitudes.     

Contrasting time-scale effects of land-use legacy on species richness,diversity and composition in Mediterranean scrubland communities

Context

It is known that land-use and land-cover (LULC) changes affect plant community assembly for decades. However, both the short- and the long-term effects of contrasting LULC change pathways on this assembly are seldom explored.

Objectives

To assess how LULC change pathways affect woody plant community parameters (i.e. species richness, diversity and evenness) and species’ presence and abundance, compared with environmental factors and neutral processes.

Methods

The study was performed in Mediterranean limestone scrublands in NE Spain. Cover of each woody species was recorded in 150 scrubland plots belonging to five LULC change pathways along the past century, identified using land-cover maps and fieldwork. For each plot, total woody and herbaceous vegetation cover, local environmental variables and geographical position were recorded. Effects of these pathways and factors on plant community parameters and on species presence and abundance were assessed, considering spatial effects potentially associated to neutral processes.

Results

Species richness and diversity were associated with LULC change pathways and elevation, while evenness was only associated with this last. Pathways and environmental variables explained similar variance in both species’ presence and cover. In general, while community parameters were affected by recent-past (1956) use, species presence and abundance were associated with far-past (pre-1900) cropping. No relevant spatial effect was detected for any studied factor.

Conclusions

Historical LULC changes and current environmental factors drive local-scale community assembly in Mediterranean scrublands to an equal extent, while contrasting time-scale effects are found at community and species level. Neutral, dispersal-based processes are found to be non-relevant.

     

Phytotoxins from anaerobically decomposing wheat straw

Phytotoxicity was demonstrated in the aqueous extract of wheat (Triticum aestivum, L.) straw suspensions. When extracts were incubated under anaerobic conditions, the development of phytotoxicity was greater at 20°C than at 10°C. The toxic products formed during incubation depended upon the incubation medium. Acetic and butyric acids were the major toxins produced in liquid straw fermentations during the first 2 weeks. However, after that time the acids did not account for the total toxicity, suggesting formation of unidentified phytotoxins. Acetic, propionic and butyric acids were the toxins formed in sand culture. The development and accumulation of phytotoxins were favored where the sand-straw mixtures were water-saturated. The implications of these findings to wheat cultural practice is discussed.     

The exploitation of helix pomatia L.

The evidence at present available, although incomplete, gives rise to fears for the future of the edible snail Helix pomatia L. The scale of exploitation is increasing, particularly in Eastern Europe, to meet growing demand, mainly from the West. The growth of legislation to control collecting supports the evidence of declining numbers, but the legislation does not appear to be backed by sufficiently detailed population ecology studies. The need for co-ordinated international action on farming, legislation and ecological study is urged.