Prediction of Genetic Gain in Sweet Corn using Selection Indexes

Journal of Crop Science and Biotechnology - The cultivation of sweet corn is expanding in Brazil, but there are serious constraints about the availability of commercial cultivars. The selection of...     

Radiographic anatomy of the cockatiel (Nymphicus hollandicus) axial and appendicular skeleton

Cockatiels are popular pets. Still, despite medical and surgical relevance, the radiographic anatomy of the cockatiel (Nymphicus hollandicus) skeleton, like that of different wild and exotic bird species, has seldom been described. This study set out to describe the radiographic anatomy of the cockatiel skeleton. Twelve adult male and nine adult female specimens were radiographed using a digital X-ray system and different views. The radiographic anatomy of these birds was similar to that of other Psittacidae. However, some particularities inherent to the target species were detected, such as the presence of four flexion zones in the skull (craniofacial, nasal, jugal arch and palatine), complete bony orbit comprising a suborbital arch, 34–38 vertebrae (10 or 11 cervical, 8 or 9 thoracic, 9 or 10 lumbosacral, 5 or 6 caudal vertebrae and a pygostyle comprising 2 fused vertebrae), eight or nine pairs of ribs and a notarium made up of fused T2–T6 vertebrae. Poor radiopacity of the notarium, ribs and respective uncinate processes, and synsacral vertebrae made demarcation of these structures difficult. The appendicular skeleton of the cockatiel was very similar to that of other Psittacidae, and there were no gender-related differences.     

Genomic variability and plasticity of Pseudomonas causing coffee leaf spots in Minas Gerais state,Brazil

Foliar spots caused by Pseudomonas coronafaciens pv. garcae (Pcg), Pseudomonas amygdali pv. tabaci (Pat) and Pseudomonas cichorii (Pch) are major bacterial diseases that can reduce coffee production. However, little is known about the genetic diversity and molecular mechanisms underlying the pathogenicity to coffee plants of these bacteria. In this study, genome sequences of Pcg, Pat and Pch strains isolated from coffee plants in Minas Gerais state, Brazil, were used to assess their variability and plasticity, and compare their type III secretion system (T3SS) and apoplastic effector repertoires as well as tabtoxin biosynthetic/detoxification genes. Genomic diversity was found for all three phytopathogens, among which Pch possesses the highest number of exclusive proteins. The Pcg genome is the most stable whereas that of Pch is the most plastic, which is related to their host ranges. When compared with those of Pseudomonas syringae pv. tomato DC3000, hrp/hrc gene sequences are more conserved in Pcg and Pat than in Pch, which also possesses the smallest T3SS and the largest apoplastic effector repertoires. The only T3SS effector family common to all three pathogens is AvrE, suggesting that, as for other plant–Pseudomonas interactions, it may play a crucial role for pathogenicity towards coffee plants. Apoplastic proteins associated with maintaining the redox balance and degrading proteins/peptides not previously described as important in plant–bacteria interactions were found. Gain/loss of the tabtoxin biosynthetic cluster with retention of the antitoxin gene was observed, indicating that tabtoxin production is not a limiting factor for the occurrence of mixed infections.     

Comprehensive prediction of plant cytoplasmic and apoplastic effectors underlying Erwinia psidii pathogenicity

Erwinia psidii (Eps) is the causal agent of emerging diseases of eucalypt and guava; however, the mechanisms underlying its pathogenicity are not fully understood. Here, we predicted factors involved in the ability of Eps to cause disease on its host plants. For that, the genomes of four Eps strains exhibiting different virulence on eucalypt were sequenced, and hrp/hrc genes coding for the type III secretion system (T3SS), effectors injected into the plant cell cytoplasm through the T3SS (T3SEs) and their plant subcellular localizations, as well as proteins deployed to the host apoplast, were predicted. It was found that Eps possesses a complete hrp/hrc gene cluster based on comparison with Erwinia amylovora. A total of 18 T3SEs were predicted, 11 of which were shared among all strains, none were exclusive to any strain and seven were absent in at least one strain. No sequence variation among strains was found for five T3SE candidates whereas extensive variation was found for six, suggesting the latter may be determinants of virulence differences. The T3SE candidates are predicted to target the plant cell nucleus, cytoplasm, mitochondrion, chloroplast and peroxisome. The predicted apoplastic effector repertoire common to all four strains was over-represented in proteins of unknown functions or predicted to possess enzymatic activities, among which the most abundant were oxidoreductases and peptidases. Proteins with lytic transglycosylase activity were predicted in strain-specific apoplastic effector repertoires. These results provide an important framework for future research aimed at uncovering the factors underlying Eps pathogenicity.     

Fatal cases of Theileria annulata infection in calves in Portugal associated with neoplastic-like lymphoid cell proliferation

This study was carried out to investigate fifteen cases of acute lethal infection of calves (≤ 4 months of age) by the protozoan parasite Theileria (T.) annulata in the south of Portugal. Calves developed multifocal to coalescent nodular skin lesions, similar to multicentric malignant lymphoma. Infestation with ticks (genus Hyalomma) was intense. Theileria was seen in blood and lymph node smears, and T. annulata infection was confirmed by isolation of schizont-transformed cells and sequencing of hypervariable region 4 of the 18S rRNA gene. At necropsy, hemorrhagic nodules or nodules with a hemorrhagic halo were seen, particularly in the skin, subcutaneous tissue, skeletal and cardiac muscles, pharynx, trachea and intestinal serosa. Histologically, nodules were formed by large, round, lymphoblastoid neoplastic-like cells. Immunohistochemistry (IHC) identified these cells as mostly CD3 positive T lymphocytes and MAC387 positive macrophages. A marker for B lymphocytes (CD79αcy) labeled very few cells. T. annulata infected cells in these nodules were also identified by IHC through the use of two monoclonal antibodies (1C7 and 1C12) which are diagnostic for the parasite. It was concluded that the pathological changes observed in the different organs and tissues were caused by proliferation of schizont-infected macrophages, which subsequently stimulate a severe uncontrolled proliferation of uninfected T lymphocytes.     

Liquid organic fertilizer sprayed on shoots of Phaseolus vulgaris stimulates arbuscular mycorrhiza colonization and phosphate solubilizing microorganisms in soil

Processed organic agricultural byproducts such as liquid organic fertilizer (LOF) are promising alternatives that can improve crop productivity while reducing mineral fertilizer use and improving sustainability. The effects on beneficial soil organisms, such as arbuscular mycorrhizal (AM) fungi and phosphate solubilizing microorganisms (PSM), caused by LOF spraying on shoots is poorly understood. Therefore, we evaluated how AM colonization and soil PSM are affected by LOF spraying on common beans (Phaseolus vulgaris L.) grown in a greenhouse. The LOF was obtained by anaerobically fermenting a mixture of fresh water, cattle manure, bovine milk, sugarcane molasses and mineral salts. LOF was applied twice on the plant shoots. Fresh and dry mass of root and shoot, P content, P accumulation in the shoots and AMF spore counts in the soil were not LOF dose dependent. However, we found that a 5% LOF application stimulated AM colonization and led to dose-dependence for calcium and aluminium phosphate solubilizing bacteria and fungi. These results show that LOF sprayed on shoots causes responses on soil communities. We therefore endorse the use of LOF in low input agriculture.     

Determination of methionine requirement of juvenile silver catfish (Rhamdia quelen) and its effects on growth performance,plasma and hepatic metabolites at a constant cystine level

This study was performed to determine the dietary methionine requirements and its effects on growth performance, plasma and hepatic metabolites for juvenile silver catfish. The fish (initial weight = 3.26 ± 0.3 g) were distributed in 24 experimental units (35 fish each). Six diets were formulated with increasing levels of methionine (09, 16, 23, 30, 37 and 44 g/kg protein diet). Each diet was distributed randomly to the groups, with four replicates fed twice daily to apparent satiation for 15 weeks. Methionine levels influenced in body composition (moisture and ash), and submit effect on liver metabolism and plasma. The relative weight gain (RWG) and specific growth rate (SGR) increased with highest levels of methionine to 30 g/kg protein in the diet, thereafter maintaining a nearly constant level of 1.9 g/kg cystine in the protein diet. The protein retention coefficient (PRC) also increased with increasing levels of up to 23 g/kg protein diet, thereafter maintaining a constant level of 1.9 g/kg cystine protein diet until beginning to decrease at a level of 44 g/kg protein diet. In conclusion, methionine is an essential amino acid for the growth of juvenile silver catfish and exhibits an efficient capacity when provided as a synthetic amino acid. Based on the RWG and SGR data, the methionine requirement of juvenile silver catfish was estimated at 34.42 and 35.85 g/kg of the CP or 12.74 g/kg and 13.26 g/kg of the diet respectively.