Validation of the specificity and sensitivity of species-specific primers that provide a reliable molecular diagnostic for <Emphasis Type="Italic">Xiphinema diversicaudatum</Emphasis>, <Emphasis Type="Italic">X. index</Emphasis> and <Emphasis Type="Italic">X. vuittenezi</Emphasis>

Xiphinema diversicaudatum and X. index are vector nematode species of economic importance in viticulture regions as they can transmit Arabis Mosaic, Grapevine Fanleaf and Strawberry Latent Ringspot viruses to grapevine. Wang et al. (2003) designed species-specific diagnostic primers from ribosomal genes for both these vector species as well as a vector and a non-vector species X. italiae and X. vuittenezi, respectively. Our study aimed to confirm the specificity and determine the sensitivity and reliability of the primers for the two vector species, X. diversicaudatumand X. indexwhen challenged with closely related longidorid species and general nematode communities typical of vineyard soil. With one exception, no PCR product was observed when the primers were tested against six Longidorus, one Paralongidorus and one Xiphinema non-target species. Occasionally (three out of eight replicate PCR reactions) a weak PCR product was noted when primers for X. index were tested with L. elongatus. Furthermore, when challenged with a range of non-target nematode species comprising the nematode community typical of viticulture soil, no PCR product was amplified. An experimental dilution series of extracted DNA rigorously demonstrated that DNA from an equivalent single specimen of the target virus-vector species, X. diversicaudatum and/or X. index, could be detected amongst 1000 equivalent non-targetX. vuittenezi. Also, extracted DNA from an equivalent single target specimen was detected when added to DNA extracted from the overall soil nematode community. The primers were assessed further by using serial mixtures of actual nematodes rather than extracted DNA to simulate field soil. Using this method, a single target nematode could be detected amongst 200 non-target specimens. Given their specificity, sensitivity and reliability, it appears that these diagnostic primers will be of great benefit to phytosanitary/quarantine services related to the viticulture industry.     

Assessment of pulse co-oximetry technology after in vivo adjustment in anaesthetized dogs

ObjectiveTo compare values of haemoglobin concentration (SpHb), arterial haemoglobin saturation (SpO₂) and calculated arterial oxygen content (SpOC), measured noninvasively with a pulse co-oximeter before and after in vivo adjustment (via calibration of the device using a measured haemoglobin concentration) with those measured invasively using a spectrophotometric-based blood gas analyser in anaesthetized dogs.Study designProspective observational clinical study.AnimalsA group of 39 adult dogs.MethodsIn all dogs after standard instrumentation, the dorsal metatarsal artery was catheterised for blood sampling, and a pulse co-oximeter probe was applied to the tongue for noninvasive measurements. Paired data for SpHb, SpO₂ and SpOC from the pulse co-oximeter and haemoglobin arterial oxygen saturation (SaO₂) and arterial oxygen content (CaO₂) from the blood gas analyser were obtained before and after in vivo adjustment. Bland–Altman analysis for repeated measurements was used to evaluate the bias, precision and agreement between the pulse co-oximeter and the blood gas analyser. Data are presented as mean differences and 95% limits of agreement (LoA).ResultsA total of 39 data pairs were obtained before in vivo adjustment. The mean invasively measured haemoglobin–SpHb difference was –2.7 g dL^?1 with LoA of –4.9 to –0.5 g dL^?1. After in vivo adjustment, 104 data pairs were obtained. The mean invasively measured haemoglobin–SpHb difference was –0.2 g dL^?1 with LoA of –1.1 to 0.6 g dL^?1. The mean SaO₂–SpO₂ difference was 0.86% with LoA of –0.8% to 2.5% and that between CaO₂–SpOC was 0.66 mL dL^–1 with LoA of –2.59 to 3.91 mL dL^–1.ConclusionsBefore in vivo adjustment, pulse co-oximeter derived values overestimated the spectrophotometric-based blood gas analyser haemoglobin and CaO₂ values. After in vivo adjustment, the accuracy, precision and LoA markedly improved. Therefore, in vivo adjustment is recommended when using this device to monitor SpHb in anaesthetised dogs.     

Primary intraocular primitive neuroectodermal tumor (retinoblastoma) causing unilateral blindness in a gelding

A 14-year-old gray gelding was presented for investigation of a visible, pale-colored ocular mass in the right eye. An intraocular mass was identified clinically and ultrasonographically as originating from the superior nasal quadrant of the ciliary body and retina. The mass occupied the majority of the vitreous chamber and some of the superior anterior chamber of the eye. The affected eye was blind. Following exenteration, a primary intraocular primitive neuroectodermal tumor (i.e. a retinoblastoma/medulloepithelioma), a rarely described intraocular mass in adult horses, was identified by pathologic examination. The gelding returned to normal use following a short recovery period.     

Combining deliberative and computer-based methods for multi-objective land-use planning

This paper reports the outcomes of a deliberative workshop comparing land-use plans proposed by land-manager or domain experts with those derived using a computer-based decision support system (DSS). The DSS integrates four main components, a geographic information system, land-use systems simulation models, impact assessments and land-use planning tools. The land-use planning tools draw on the other components to generate and evaluate alternative patterns of land use and management. Since the land-use planning tools are based on multi-objective genetic algorithms (mGAs) it is possible to generate a range of alternative plans that define the structure of the trade-off between the objectives. The workshop tasked the delegates with specifying land-use plans that achieved the best compromise between two objectives known to be non-commensurable and conflicting. The nature of the best compromise was dependent on their individual perspectives. The delegates proposed allocations both as individuals and in researcher-facilitated sub-groups. The mGA allocations were then compared with those derived by delegates and were found to be broadly similar in performance. Differences in the range of allocations considered feasible were explained by the hard and soft constraints on allocations agreed between the delegates and articulated within the workshop process. The hypothesis that part of the difference in performance between the mGA and delegate allocations was due to the delegates blocking together fields with the same land use for convenience of management was proved. The analysis of the group allocations revealed that the decision-making process had failed to improve on the individual allocations. From these results it was concluded that there was a potential role for mGA based land-use planning tools in researching into, and deliberating on, the possible impacts of policy or other factors affecting land-use systems. It was further concluded that the tools should not be used in isolation since there was the need for stake-holder inputs to adequately define the range of feasible and practical land-use plans.     

Assessing the options for upland livestock systems under CAP reform: Developing and applying a livestock systems model within whole-farm systems analysis

This paper presents a scenario-based analysis of the impacts of Common Agricultural Policy (CAP) reform for upland agriculture using a Welsh case-study. Specifically the paper examines the impacts of the introduction of the single-farm payment (SFP), the modulation of direct payments under Pillar I of the CAP and the increase in agri-environment payments under Pillar II. Three enterprises are examined, upland sheep rearing with lamb finishing, spring- and autumn-calving suckler-cattle with calf rearing. These enterprises are modelled under conditions in 2002/3, 2004/5 and for the reformed CAP in 2005/6. To support this analysis a livestock system model (LSM) was implemented. The model assesses alternative management regimen using a flexible state-transition approach. This simplifies the realisation and parameterisation of potentially complex management regimen. The model tracks fodder requirements to achieve targets based on defined diets. The LSM underpins whole-farm analyses of stocking-rates, labour and other resource requirements and net-farm income. From the case study the paper concludes that the impacts of the introduction of the CAP reform on the financial performance of the systems are small but negative (a net reduction of around 5% in support). The larger reduction in direct payments (15–18%) is partially offset by agri-environment measures. The paper concludes that while SFP encourages a more market-oriented outlook, the adaptive capacity within systems as they stand is very limited. There are a range of possible adaptation strategies, but for the uplands the extensification of cattle systems by reducing stock numbers and cutting back on labour seems most probable.     

INTEGRATED CROP-LIVESTOCK SYSTEMS: LESSONS FROM NEW YORK,BRITISH COLUMBIA,AND THE SOUTH-EASTERN UNITED STATES

• Livestock production in North America has moved to fewer farms with greater inventories • Land application of livestock manures is a preferred nutrient recycling strategy • Confined animal feeding operations have challenges to utilize livestock manure sustainably • Integration of livestock and cropping systems is possible on a farm or among farms • Nutrient balance is needed for environmental sustainability Livestock production in the United States (US) and Canada is diverse, but shows a common trend in most livestock sectors toward fewer farms producing the majority of animal products despite a large number of farms still small in production scale. The migration to larger and more concentrated animal feeding operations in beef finishing and poultry, swine, and dairy production allows processors to streamline supplies to meet market demand for abundant, low-cost livestock products, whether that be for packaged meat, dairy products, or eggs. With concentration of livestock operations comes the challenge of managing manures. When sufficient land is available and nutrients are needed, livestock manure is an excellent nutrient source and land application is the preferred method of recycling this resource. However, when livestock production is constrained in a geographical area and animal densities are high, manure may become an environmental liability with potentially greater risk for runoff and leaching of nutrients, emission of odors, ammonia, and greenhouse gases, and release to the environment of pathogens and chemicals of emerging concern. Addressing these challenges now and into the future requires learning from mistakes and adopting successful approaches. We describe different levels of integration between livestock and crop producers in New York, British Columbia, and the south-eastern US as learning opportunities to improve economic and environmental sustainability. Examples show that effective solutions should recognize (1) manure has value and is not just a cost, (2) farmers, farm advisors, extension educators, nutrient management planners, crop advisors, nutritionists, state agency personnel, regulators, and university researchers need to be active participants in development of solutions, and (3) change to a sustainable future requires a combination of government regulation and outcome-based incentives.