Characterization of 38 kDa and 42 kDa chitinase isozymes from the liver of Japanese common squid Todarodes pacificus

ABSTRACT: Characterization was investigated on the 38 kDa and 42 kDa chitinase (EC3.2.1.14) isozymes from the liver of Japanese common squid Todarodes pacificus . Optimum pH toward colloidal chitin was observed at pH 3.0 for the 38 kDa chitinase, and pH 3.0 and 9.0 for the 42 kDa chitinase. K _m and k _cat of the 38 kDa and 42 kDa chitinases toward a longer substrate, glycol chitin, were 0.071 mg/mL and 1.22/s, and 0.074 mg/mL and 0.196/s, respectively. Alternatively, strong substrate inhibition of both chitinases were observed toward a short substrate, N -acetylchitopentaose (GlcNAc₅). Both chitinases decomposed not only chitin but also chitosan (D. A. 95%). The cleavage pattern and reaction rate were investigated using N -acetylchitooligosaccharides (GlcNAc_n, n  = 2–6). Both chitinases hydrolyzed GlcNAc_n ( n  = 4,5, and 6). The release of GlcNAc was not observed. The speed of the reaction was observed to be in the following order: GlcNAc₄ > GlcNAc₅ > GlcNAc₆ for the 38 kDa chitinase, and GlcNAc₆ > GlcNAc₅ > GlcNAc₄ for the 42 kDa chitinase. Both the chitinases released p -nitrophenol from p -nitrophenyl GlcNAc_n ( n  = 2, 3, and 4). N-terminal amino acid sequences of the 38 kDa and 42 kDa chitinases were YLLSXYFTNWSQYRPGAGKYFPQNI and EYRKVXYYTNWSQYREVPAKFFPEN, respectively.     

Population reproductive potential: Evaluation of long-term stock productivity

In order to avoid recruitment overfishing, fish stocks must have sufficient reproductive ability. The spawning stock biomass (SSB), which ignores the value of immature fish, is widely used as an index of stock sustainability. From the perspective of sustainability, immediate reproduction, as well as future spawning, must be considered. We developed an index of long-term stock productivity, called the population reproductive potential (PRP). PRP is defined as the expected total reproductive value of the standing stock. We used PRP to assess the western Atlantic bluefin tuna (WBT) stock. The trends in SSB, numbers (N), biomass and PRP of WBT are inconsistent when compared to each other, due to fluctuation in age composition. We evaluated the long-term productivity of WBT by computer simulation and compared the result with trends in the abundance indices. The result of the computer simulation was highly consistent with the trend in the PRP. Short-term trends in SSB and N often do not reflect long-term stock trends, because they are highly sensitive to age-composition dynamics. The PRP is useful for evaluating stock trends, especially when the age composition is unstable.