Antimycotic Screening of 58 Malaysian Plants against Plant Pathogens

Ethanolic extracts of 58 Malaysian plants belonging to 24 different families were screened for antifungal activity against seven plant pathogens using the filter paper disc diffusion technique. Two varieties of Piper betle, showed strong activity against all the pathogens tested (Colletotrichum capsici, Fusarium pallidoroseum, Botryodiplodia theobromae, Alternaria alternata, Penicillium citrinum, Phomopsis caricae-papayae and Aspergillus niger), with inhibition diameters significantly (P<0·01) bigger than 2·5 mg ml⁻¹ prochloraz or 10 mg ml⁻¹ clotrimazole. The minimum inhibitory concentrations of the ethanolic extracts of P. betle against these plant pathogens ranged between 0·01 mg ml⁻¹ and 1 mg ml⁻¹. Thirty-four other plants (Kucing gala, Limau batik, Bertholletia excelsa, Bixa orellana, Caesalpinia pulcherrima, Cerbera odollam (fruits and leaves), Colocasia gigantea, Curcuma domestica, Curcuma manga, Derris eliptica, Elephantopus scaber, Eleusine indica, Eugenia polyantha, Euphorbia hirta, Euphorbia tirucalli, Gardenia florida, Hedyotis auricularia, Hibiscus rosa-sinensis, Juniperus chinensis (three varieties), Lawsonia inermis, Lecythis ollaria, Mentha arvensis, Mimusops elengi, Ocimum sanctum, Phyllanthus niruri, Piper nigrum, Piperomia pellucida, Pedilanthus tithymaloides, Polygonum minus, Spondias dulcis, Solanum nigrum, Tinospora tuberculata) showed selective antifungal activity, while 21 species were inactive.     

Single nucleotide polymorphisms in the growth hormone gene of Oreochromis niloticus and their association with growth performance

Polymorphisms in the growth hormone (GH) gene that is associated with the growth rate of farmed fish have been the target of many breeding programmes. The present study aimed to identify single nucleotide polymorphisms (SNPs) in GH gene regions to evaluate the association of SNP variations with the growth rate of two Nile tilapia: Oreochromis niloticus (Linnaeus, 1758) strains. The targeted regions were amplified, sequenced, aligned and screened for the presence of SNPs; thereafter, performance tests were used to check for the association between SNPs and weight. Allele and genotype frequencies were estimated for each SNP and genotype. Genotype blocks or sets of SNP genotypes and frequencies were also estimated. Association between SNPs and growth rate was statistically evaluated using a univariate linear mixed model that included both fixed and random effects. A total of 10 SNPs were identified, nine in the proximal promoter and one located in the 5′ UTR, forming 10 genotype blocks. In all weight recordings, five genotype blocks were significantly associated with the highest weights. Single nucleotide polymorphisms 6‐10 were also found to be significantly associated with growth (p‐value < .05). Genotypes with higher additive genetic values for weight were identified in the Chitralada strain, suggesting a possible impact of these additive effects of the GH SNP genotype on the growth rate of Nile tilapia. These findings may be used as part of marker‐assisted selection in tilapia breeding programmes.     

Inhibition of low-density lipoprotein oxidation and up-regulation of low-density lipoprotein receptor in HepG2 cells by tropical plant extracts

Twelve edible plant extracts rich in polyphenols were screened for their potential to inhibit oxidation of low-density lipoprotein (LDL) in vitro and to modulate LDL receptor (LDLr) activity in cultured HepG2 cells. The antioxidant activity (inhibition of LDL oxidation) was determined by measuring the formation of conjugated dienes (lag time) and thiobarbituric acid reagent substances (TBARS). Betel leaf (94%), cashew shoot (63%), Japanese mint (52%), semambu leaf (50%), palm frond (41%), sweet potato shoot, chilli fruit, papaya shoot, roselle calyx, and maman showed significantly increased lag time (>55 min, P < 0.05) and inhibition of TBARS formation (P < 0.05) compared to control. LDLr was significantly up-regulated (P < 0.05) by Japanese mint (67%), semambu (51%), cashew (50%), and noni (49%). Except for noni and betel leaf, most plant extracts studied demonstrated a positive association between antioxidant activity and the ability to up-regulate LDL receptor. Findings suggest that reported protective actions of plant polyphenols on lipoprotein metabolism might be exerted at different biochemical mechanisms.     

Comparative efficacy sensitivity and specificity of the tests used for the Diagnosis of Helicobacter pylori

Abstract: A total number of 157 samples were examined by 4 different tests-In-house rapid urease (iRUT), Culture, Histopathology and Immunochromatography (Immuno CardSTAT) for the detection of Helicobacter pylori from the patients reported to Hospital Kuala Lumpur, Malaysia during 2007 to 2008. Out of the samples examined 47 (29.9%) were positive for H. pylori by the tests used in the laboratory. Efficacy of detection of the bacteria by the tests- In-house rapid urease, Culture, Histopathology and Immuno CardSTAT were 31.8, 13.9, 30.3 and 32.8%, respectively. However, sensitivity and specificity of the iRUT were 91.5 and 93.6%, respectively and the Positive Predictive Value (PPV) was 86% and the Negative Predictive Value (NPV) was 96.3%. The sensitivity for Immuno CardSTAT rapid test was 100% and the specificity was 79.3%. The PPV was 50% and the NPV was 100%. Convenient methods to the authors were 'In house rapid urease test and Immunochromatography though variability of specificities were observed.     

Use of Cyclopoid Copepod Apocyclops dengizicus as Live Feed for Penaeus monodon Postlarvae

In this study, the suitability of cyclopoid copepod Apocyclops dengizicus as a live food for black tiger shrimp, Penaeus monodon, postlarvae was investigated. After 14 d, P. monodon postlarvae (PL1) had survival rates of 41.7 ± 2.9% (mean ± SE), 28.7 ± 1.2%, 56.3 ± 3.7%, 4.4 ± 1.9%, and 2.8 ± 1.0% when fed A. dengizicus (CC), Artemia nauplii (AN), mixture of A. dengizicus and Artemia nauplii (CC + AN), artificial shrimp feed (SF), and microalga Tetraselmis tetrathele (TT), respectively. Specific growth rates (SGRs) of P. monodon were maximum (14.2 ± 0.6%/d) in CC + AN, followed by CC (11.0 ± 0.4%/d), AN (9.3 ± 0.7%/d), SF (6.1 ± 0.2%/d), and TT (6.0 ± 0.5%/d). The total n‐3 fatty acids of postlarvae increased from 20.6 to 25.8% when fed with CC, 28.8% with AN, and 29.0% with CC + AN. Better survival and SGRs of P. monodon postlarvae could be attributed to docosahexaenoic acid : eicosapentaenoic acid : arachidonic acid ratio of CC (10.2:3.2:1) diet. The results of this study showed that A. dengizicus has a potential to be used as a substitute live feed for P. monodon postlarvae because of better survival, growth, and high polyunsaturated fatty acids.     

Nutritional values of Apocyclops dengizicus (Copepoda: Cyclopoida) fed Chaetocerous calcitrans and Tetraselmis tetrathele

The cyclopoid copepod Apocyclops dengizicus was isolated from a marine shrimp pond, Penaeus monodon, Kuala Selangor, Malaysia, and reared in the laboratory for 3 months to establish a pure population stock. Amino acids and fatty acids of A. dengizicus were determined when fed Chaetocerous calcitrans (C), Tetraselmis tetrathele (T) and their combination (CT) (1:1 by number). The protein contents in A. dengizicus that received C, T and CT were 46.8%, 60.5% and 55.3% of dry weight respectively. Correspondingly, the lipid was 19.0%, 17.8% and 19.1% of dry weight for C, T and CT respectively. The A. dengizicus cultured on C, T and CT had total essential amino acids without tryptophan measurement of 57.1, 60.3 and 67.8 and total non‐essential amino acids of 42.9%, 40.0% and 32.2% of total amino acids. The fatty acid content of A. dengizicus showed that it was able to synthesize docosahexenoic acid (22:6n‐3, DHA), eicosapentaenoic acid (20:5n‐3, EPA) and arachidonic acid (20: 4n‐6, ARA) from examined microalgal diets. The DHA:EPA:ARA ratios of A. dengizicus fed on C, T and CT were 6.8:3.0:1, 14.0:5.8:1 and 11.6:2.6:1 respectively. Apocyclops dengizicus could be suitable live food for larval fish and shrimp rearing because it meets their nutritive requirements.     

Correlation between cytochrome P450 1A (cyp1a) mRNA expression and ambient phenanthrene and pyrene concentration in Javanese Medaka Oryzias javanicus

Fisheries Science - Cytochrome P450 1A (Cyp1a) catabolizes polycyclic organic compounds. In this study, we sequenced the cyp1a gene from two Javanese medaka&nbsp;Oryzias...     

Proteins and amino acids of some local varieties of rice seeds (Oryza Sativa L.)

Proteins and amino acids in four local rice (Oryza Sativa L.) varieties were identified. Albumin and globulin were extracted from rice seeds, and the major promoters of these proteins were investigated by polyacrylamide gel electrophoresis to show their patterns.Amino acid composition of the rice seed were determined quantitatively and qualitatively, and classified according to their acidic, basic and uncharged polar groups.Essential amino acids for each variety were determined, and the hydrophobicity index value of Amber 33 was (0.6078), Mishkhab 1 (0.63372), Hybrid 2 (0.6523) and Hwazawi (0.7411).